CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:C (Size=188) 
Chain 2: pdb1yc9.ent:A (Size=442)

Alignment length = 58 Rmsd = 4.98A Z-Score = 3.7 Gaps = 10(17.2%) CPU = 10s Sequence identities = 12.3%

Chain 1:  106 KSSFQNANYVAVLEENPYLPKHIEVNEKD-----RLLAERFLEESVFSFRRERLLKQIDEALDKQDKEAF
Chain 2:  165 HAALQVRNKTVELLEKR-----YANGLETLGSVSQAKAVAASVEAELLGIQESIQLQKNALAALVGQGPD

Chain 1:  171 HRLTA
Chain 2:  230 RAASI

     X2 = ( 0.492049)*X1 + (-0.555491)*Y1 + (-0.670311)*Z1 + (  115.371351)
     Y2 = ( 0.436017)*X1 + ( 0.823687)*Y1 + (-0.362532)*Z1 + (   34.723556)
     Z2 = (-0.753510)*X1 + ( 0.113884)*Y1 + (-0.647498)*Z1 + (  190.241099)