CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:C (Size=188) 
Chain 2: pdb1vjt.ent:A (Size=483)

Alignment length = 69 Rmsd = 3.92A Z-Score = 3.7 Gaps = 28(40.6%) CPU = 12s Sequence identities = 8.7%

Chain 1:   23 YQLKQRECVWILNYLM-SHDQLMHKVHFVEHAKYCPRGLVMSANCVKDTP---FHFFKQNVMTTDAEKSF
Chain 2:   18 IGAGSVRFALQLVGDIAQTEELSREDTHI----------YXXD--VHERRLNASYI---------LARKY

Chain 1:   89 HDIRLNRDEDIYIQLNFKSSFQNANYV
Chain 2:   67 -VEELNS--PVKIVKTSSLDEAIDGAD

     X2 = ( 0.120456)*X1 + (-0.896906)*Y1 + ( 0.425501)*Z1 + (   50.619042)
     Y2 = (-0.140446)*X1 + ( 0.408914)*Y1 + ( 0.901701)*Z1 + (   18.251062)
     Z2 = ( 0.982734)*X1 + ( 0.168375)*Y1 + ( 0.076710)*Z1 + (   59.398749)