CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:C (Size=188) 
Chain 2: pdb2gyq.ent:A (Size=173)

Alignment length = 55 Rmsd = 4.01A Z-Score = 3.9 Gaps = 10(18.2%) CPU = 2s Sequence identities = 3.2%

Chain 1:  106 KSSFQNANYVAVLEENPYLPKHIEVNEKDRLLAERFLEESVFSFRRERLLKQIDEALDKQDKEAFHRLTA
Chain 2:   84 IDGLIKEADETAGEI--------ADKTVLDAAIVANAQAVEHYEIARYGTLIAWAE--ELGHDDIVRFLT

Chain 1:  176 EL
Chain 2:  144 TN

     X2 = (-0.468600)*X1 + ( 0.700944)*Y1 + (-0.537673)*Z1 + (   66.654045)
     Y2 = ( 0.501335)*X1 + (-0.290130)*Y1 + (-0.815162)*Z1 + (   39.603087)
     Z2 = ( 0.727377)*X1 + ( 0.651539)*Y1 + ( 0.215452)*Z1 + (  132.768477)