CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:C (Size=188) 
Chain 2: pdb1j31.ent:A (Size=262)

Alignment length = 69 Rmsd = 4.04A Z-Score = 3.7 Gaps = 19(27.5%) CPU = 4s Sequence identities = 8.7%

Chain 1:   23 YQLKQRECVWILNYLMSHDQ--LMHKVHFVEHAKYCPRGLVMSANCV-----KDTPFHFFKQNVMTTDAE
Chain 2:   12 KILELDKNYSKAEKLIKEASKEGAKLVVLPE--------LFDTGYNFESREEVFDVAQQI----PEGETT

Chain 1:   86 KSFHDIRLNRDEDIYIQL
Chain 2:   70 TFLXELARELGLYIVAGT

     X2 = (-0.277226)*X1 + (-0.158805)*Y1 + (-0.947590)*Z1 + (    4.132876)
     Y2 = (-0.928641)*X1 + ( 0.297334)*Y1 + ( 0.221852)*Z1 + (    4.670978)
     Z2 = (-0.246520)*X1 + (-0.941474)*Y1 + ( 0.229902)*Z1 + (  121.465074)