CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:C (Size=188) 
Chain 2: pdb2pjz.ent:A (Size=263)

Alignment length = 69 Rmsd = 5.10A Z-Score = 3.7 Gaps = 18(26.1%) CPU = 4s Sequence identities = 7.2%

Chain 1:   11 EKKDFVKWFLNNYQLKQRECVWILNYLMS----HDQLMHKVHFVEHAKYCPRGL---VMSA----NCVKD
Chain 2:   89 TVNDIVYLYEELKGL----DRDLFLEMLKALKLGEEILRRKLYKL---SAGQSVLVRTSLALASQPEIVG

Chain 1:   70 TPFHFFKQNVMTTDAEK
Chain 2:  152 LDEPFENVDAARRHVIS

     X2 = ( 0.478084)*X1 + (-0.619884)*Y1 + ( 0.622238)*Z1 + (   99.909625)
     Y2 = (-0.717524)*X1 + (-0.684229)*Y1 + (-0.130345)*Z1 + (   48.633685)
     Z2 = ( 0.506552)*X1 + (-0.384155)*Y1 + (-0.771900)*Z1 + (  169.899566)