CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:B (Size=188) 
Chain 2: pdb1kkc.ent:A (Size=221)

Alignment length = 66 Rmsd = 3.27A Z-Score = 4.1 Gaps = 9(13.6%) CPU = 4s Sequence identities = 9.0%

Chain 1:  110 QNANYVAVLEENPYLPKHIEVNEKDRLLAERF-LEESVFSFRRERLLKQIDEALDKQDKEAFHRLTAELK
Chain 2:   18 LPPLPYPYDALQ--------PYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEATDVPKLVSVQQAIK

Chain 1:  179 MLEGHH
Chain 2:   80 FNGGGH

     X2 = (-0.271251)*X1 + (-0.906631)*Y1 + (-0.323178)*Z1 + (   90.623544)
     Y2 = ( 0.960896)*X1 + (-0.235650)*Y1 + (-0.145421)*Z1 + (   73.495316)
     Z2 = ( 0.055686)*X1 + (-0.349986)*Y1 + ( 0.935098)*Z1 + (   96.749438)