CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:A (Size=188) 
Chain 2: pdb1w9r.ent:A (Size=119)

Alignment length = 66 Rmsd = 3.80A Z-Score = 4.2 Gaps = 13(19.7%) CPU = 1s Sequence identities = 7.5%

Chain 1:  107 SSFQNANYVAVLEENPYLPKHIEVNEKDRLLAERFLEESVFSFRRERLLKQIDEALDK-QDKEAFHRLTA
Chain 2:   22 KAEDQKEEDRRNYP------------TNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKA

Chain 1:  176 ELKMLEGHHH
Chain 2:   80 EVESKKAEAT

     X2 = ( 0.284443)*X1 + ( 0.955232)*Y1 + ( 0.081393)*Z1 + (   35.394904)
     Y2 = ( 0.921971)*X1 + (-0.295833)*Y1 + ( 0.249906)*Z1 + (   32.337434)
     Z2 = ( 0.262796)*X1 + ( 0.003958)*Y1 + (-0.964843)*Z1 + (   76.953026)