CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:A (Size=188) 
Chain 2: pdb2nyf.ent:A (Size=567)

Alignment length = 70 Rmsd = 4.32A Z-Score = 4.2 Gaps = 16(22.9%) CPU = 14s Sequence identities = 1.4%

Chain 1:  110 QNANYVAVLEENPYL------------PKHIEVNEKDRLLAERFLEESVFSFRRERLLKQIDEALDKQDK
Chain 2:  426 IMPLLSFYGNSLADRFPTHAEQFNQNINSQGYISANLTRRSVDIFQNYMAIALMFGVQAVDLRTYKMKGH

Chain 1:  168 EAFHRLT----AELKM
Chain 2:  496 YDARTCLSPNTVQLYT

     X2 = ( 0.650701)*X1 + (-0.759076)*Y1 + ( 0.019793)*Z1 + (   41.761613)
     Y2 = (-0.490509)*X1 + (-0.400294)*Y1 + ( 0.774058)*Z1 + (    8.172811)
     Z2 = ( 0.579646)*X1 + ( 0.513388)*Y1 + ( 0.632805)*Z1 + (    6.127155)