CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:A (Size=188) 
Chain 2: pdb1yvl.ent:A (Size=683)

Alignment length = 78 Rmsd = 6.85A Z-Score = 4.2 Gaps = 10(12.8%) CPU = 33s Sequence identities = 6.3%

Chain 1:  105 FKSSFQNANYVAVLEENPYLPKHIE------VNEKDRLLAERFLEESVFSFRRERLLKQIDEALDKQD--
Chain 2:  224 TELTQNA--LINDELVEWKRRQQSACIGGPPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKYTYEH

Chain 1:  167 KEAFHRLTAELKMLEGHHH
Chain 2:  292 DPITKNKQVLWDRTFSLFQ

     X2 = ( 0.631326)*X1 + (-0.012310)*Y1 + ( 0.775420)*Z1 + (  -81.590530)
     Y2 = (-0.413274)*X1 + ( 0.840731)*Y1 + ( 0.349822)*Z1 + (  -33.745689)
     Z2 = ( 0.656226)*X1 + ( 0.541312)*Y1 + (-0.525688)*Z1 + (  195.515504)