CE Algorithm, version 1.00, 1998.

Chain 1: pdb3do9.ent:A (Size=188) 
Chain 2: pdb1ivh.ent:A (Size=394)

Alignment length = 70 Rmsd = 3.66A Z-Score = 4.2 Gaps = 15(21.4%) CPU = 8s Sequence identities = 5.6%

Chain 1:  106 KSSFQNANYVAVLEENPYLPKHIEVN----EKDRLLAERFLEESVFSFRRERLLKQIDEALDKQDKE--A
Chain 2:  267 QAVLDHTIPYLHVREA---------FGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKD

Chain 1:  170 FHRLTAELKMLEGHHH
Chain 2:  328 CAGVILYSAECATQVA

     X2 = (-0.417738)*X1 + ( 0.167169)*Y1 + ( 0.893056)*Z1 + (   47.998644)
     Y2 = ( 0.887534)*X1 + ( 0.285358)*Y1 + ( 0.361739)*Z1 + (    0.226333)
     Z2 = (-0.194369)*X1 + ( 0.943729)*Y1 + (-0.267573)*Z1 + (   17.516182)