DaliLite: Structural Neighbours

Query: 3BQTB MOLECULE: UNCHARACTERIZED PROTEIN;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  3BQS-A 17.2  0.7   81    85   99   UNCHARACTERIZED PROTEIN;                                   "         
   2:  2CSB-A  3.7  3.0   58   517    9   TOPOISOMERASE V;                                           "         
   3:  2FUG-2  3.5  2.7   54   178    7   NADH-QUINONE OXIDOREDUCTASE CHAIN 1;                       "         
   4:  2DL0-A  3.5  1.9   52    97   15   SAM AND SH3 DOMAIN-CONTAINING PROTEIN 1;                   "         
   5:  2NN4-A  3.1  3.2   51    62   10   HYPOTHETICAL PROTEIN YQGQ;                                 "         
   6:  2OH2-A  3.0  3.7   56   428   23   DNA POLYMERASE KAPPA;                                      "         
   7:  2B3O-A  3.0  3.1   59   504    8   TYROSINE-PROTEIN PHOSPHATASE, NON-RECEPTOR TYPE            "         
   8:  1HLV-A  2.8  3.3   49   131    8   MAJOR CENTROMERE AUTOANTIGEN B;                            "         
   9:  2QFC-A  2.5  4.3   57   284    9   PLCR PROTEIN;                                              "         
  10:  2OOE-A  2.5  3.9   58   528    9   CLEAVAGE STIMULATION FACTOR 77 KDA SUBUNIT;                "         
  11:  1S1I-K  2.5  3.0   62   131   10   5.8S/25S RIBOSOMAL RNA;                                    "         
  12:  1Q1V-A  2.5  3.2   49    70   14   DEK PROTEIN;                                               "         
  13:  1M2V-B  2.4  3.2   64   748    5   PROTEIN TRANSPORT PROTEIN SEC23;                           "         
  14:  2DOA-A  2.3  2.5   50   104   14   RNA POLYMERASE II ELONGATION FACTOR ELL;                   "         
  15:  1VB5-A  2.3  2.9   49   274   12   TRANSLATION INITIATION FACTOR EIF-2B;                      "         
  16:  1NG6-A  2.3  2.9   46   148    4   HYPOTHETICAL PROTEIN YQEY;                                 "         
  17:  1KQ8-A  2.3  3.2   48    75    4   HEPATOCYTE NUCLEAR FACTOR 3 FORKHEAD HOMOLOG 1;            "         
  18:  2QTV-A  2.2  3.0   58   733    5   PROTEIN TRANSPORT PROTEIN SEC23;                           "         
  19:  2IVM-A  2.2  2.7   40   147   20   TRANSCRIPTIONAL REGULATORY PROTEIN;                        "         
  20:  2AU3-A  2.2  3.5   58   403   12   DNA PRIMASE;                                               "         
  21:  1I1G-A  2.1  2.7   40   140   23   TRANSCRIPTIONAL REGULATOR LRPA;                            "         
  22:  2R8J-A  2.0  3.6   50   511   12   DNA POLYMERASE ETA;                                        "         
  23:  1CF7-B  2.0  2.8   47    82    4   PROTEIN (TRANSCRIPTION FACTOR E2F-4);                      "         
-

No 1: 3BQSA  MOLECULE: UNCHARACTERIZED PROTEIN;                                   

DSSP  ....LLLLLLLLHHHHHHHHLLLLLLHHHHHHLHHHHHHHHHHLLLLLLLLHHHHHHHHH
Query ....LSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCXSELYALEGA   56
ident     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct slanLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGA   60
DSSP  llllHHHLLLLLHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHH


DSSP  HLLLLHHHLLHHHHHHHHHHHHHLL
Query VQGIRWHGLDEAKKIELKKFHQSLE   81
ident |||||||||||||||||||||||||
Sbjct VQGIRWHGLDEAKKIELKKFHQSLE   85
DSSP  HHLLLHHHLLHHHHHHHHHHHHHHL


No 2: 2CSBA  MOLECULE: TOPOISOMERASE V;                                           

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct lvydaefvgserefeeeretflkgvkaydgvlatrylxersssakndeellelhqnfill   60
DSSP  llleeeelllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhlhhhhllhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct tgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldide  120
DSSP  hhhhhhlllllllleeeeeelleehhhhhhlllllllhhhhhhlllllhhhhhhhllllh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct edvpaievravkrnplqpalyrilvrygrvdlxpvtvdevppexageferlierydvpid  180
DSSP  hhlllllllllllllllhhhhhhhhhllllllllllhhhllhhhllllhhhhhhllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct ekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydert  240
DSSP  hhhhhhhhhhhhlllllhhhhhhhhlllhhhhhlllllllllhhhhhhhhhllllllhhh


DSSP  ..........................................................LL
Query ..........................................................LS    2
ident                                                           | 
Sbjct akrhvkrrdrlleelyehleelserylrhpltrrwivehkrdixrryleqrivecalkLQ  300
DSSP  hhhhhhhhhhhhhhhhhhhhhhhlllllllllhhhhhhhhhhhhhhhhhhhhhhhhhhHH


DSSP  LLLLLLHHHHHHHHLLLLLLHHHHHHLHHHHHHHHHHllllllllhHHHHHHHHHLlllh
Query ELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWendssvcxsELYALEGAVQgirw   62
ident     |       |  |                               |            
Sbjct DRYGIREDVALCLARAFDGSISXIATTPYRTLKDVCP.......dlTLEEAKSVNRtlat  353
DSSP  HHHLLLHHHHHHHHHHLLLLHHHHLLLLHHHHHHHLL.......llLHHHHHHHLHhhhh


DSSP  hhLLHHhhHHHHH...............................................
Query hgLDEAkkIELKK...............................................   75
ident                                                             
Sbjct liDEHG..LSPDAadeliehfesiagilatdleeierxyeegrlseeayraaveiqlael  411
DSSP  hhHHHL..LLHHHhhhhhhhhllhhhhhlllhhhhhhhhhhllllhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   75
ident                                                             
Sbjct tkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisi  471
DSSP  hllllllhhhhhhhhhhhllhhhhhhhhhlllhhhhhllllllhhhhhhhlllhhhhhll


DSSP  ........................................hhhhll
Query ........................................fhqsle   81
ident                                               
Sbjct rgidreraerllkkyggyskvreagveelredgltdaqirelkglk  517
DSSP  llllhhhhhhhhhhhllhhhhhlllhhhhhhllllhhhhhhhhlll


No 3: 2FUG2  MOLECULE: NADH-QUINONE OXIDOREDUCTASE CHAIN 1;                       

DSSP  llllllllhHHHHhhhllllLLHHHHHH........lHHHHHHHHHHLLLLLLLLHHHHH
Query lselpnigkVLEQdlikagiKTPVELKD........vGSKEAFLRIWENDSSVCXSELYA   52
ident                         |                   |               
Sbjct .........FFDD.....kqDFLEETFAkyppegrraAIMPLLRRVQQEEGWIRPERIEE   46
DSSP  .........LLLL.....lhHHHHHHHHllllllhhhHHHHHHHHHHHHHLLLLHHHHHH


DSSP  HHHHHLlllhhhllhhHHHHHHHHHHHLL...............................
Query LEGAVQgirwhgldeaKKIELKKFHQSLE...............................   81
ident     |              |                                        
Sbjct IARLVG.........tTPTEVMGVASFYSyyqfvptgkyhlqvcatlscklagaeelwdy   97
DSSP  HHHHHL.........lLHHHHHHHHHHLLllllllllleeeeeellhhhhlllhhhhhhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct ltetlgigpgevtpdglfsvqkveclgschtapviqvndepyvecvtrarleallaglra  157
DSSP  hhhhhlllllllllllleeeeeellllllllllleelllllllllllhhhhhhhhhhhhl


DSSP  .....................
Query .....................   81
ident                      
Sbjct gkrleeielpgkcghhvheve  178
DSSP  lllhhhlllllllllllllll


No 4: 2DL0A  MOLECULE: SAM AND SH3 DOMAIN-CONTAINING PROTEIN 1;                   

DSSP  .........................LLLL...LLLLhHHHHHHHLLLLLLHHHHHHlHHH
Query .........................LSEL...PNIGkVLEQDLIKAGIKTPVELKDvGSK   32
ident                           |               |  ||  |        | 
Sbjct gssgssggglteicrkpvspgcissVSDWlisIGLP.MYAGTLSTAGFSTLSQVPS.LSH   58
DSSP  lllllllllllllllllllllllllHHHHhhhHLLH.HHHHHHHHHLLLLLLLHHH.LLH


DSSP  HHHHHHHlllllLLLHHHHHHHHHHLLllhhhllhhhhhhhhhhhhhll
Query EAFLRIWendssVCXSELYALEGAVQGirwhgldeakkielkkfhqsle   81
ident                     |  |                         
Sbjct TCLQEAG....iTEERHIRKLLSAARL......fklppgpeamsgpssg   97
DSSP  HHHHHHL....lLLHHHHHHHHHHHHL......llllllllllllllll


No 5: 2NN4A  MOLECULE: HYPOTHETICAL PROTEIN YQGQ;                                 

DSSP  lllllLLLHhHHHHHHLLLLLLHHhhHHLHHHHHHHHHHLLLL......lLLLHHHHHHH
Query lselpNIGKvLEQDLIKAGIKTPVelKDVGSKEAFLRIWENDS......sVCXSELYALE   54
ident             | |   |                    |                  | 
Sbjct ...lnTFYD.VQQLLKTFGHIVYFgdRELEIEFMLDELKELYMnhmiekeQWARAAAVLR   56
DSSP  ...llLHHH.HHHHHHLLLLLLLLllHHHHHHHHHHHHHHHHHlllllhhHHHHHHHHHH


DSSP  HHHLLLlhhhllhhhhhhhhhhhhhll
Query GAVQGIrwhgldeakkielkkfhqsle   81
ident                            
Sbjct KELEQT.....................   62
DSSP  HHHHHL.....................


No 6: 2OH2A  MOLECULE: DNA POLYMERASE KAPPA;                                      

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct kekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfame   60
DSSP  lllhhhhhhhlllllhhhhhhhhhhhhhhhhhhhhhhhhhlllhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct leqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsmlstsnyharrfgvraam  120
DSSP  hhhllllllleeeeeellhhhhhhhhhlhhhlllleeeeelleeeeelhhhhhlllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct pgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerq  180
DSSP  lhhhhhhhlllleeelllhhhhhhhhhhhhhhhhllllllleeelleeeeelhhhhhhhl


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct nwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkp  240
DSSP  lllhhhheellllleellllhhhhhhhhhhhhhhhhllleeeeeellhhhhhhhllllll


DSSP  .....................LLLLLLLLHHHHHHHHLLLLLLHHHHHHLHhHHHHHHhh
Query .....................LSELPNIGKVLEQDLIKAGIKTPVELKDVGsKEAFLRiw   39
ident                            |||| |  |   || |  ||         |   
Sbjct ngqyqilpnrqavmdfikdlpIRKVSGIGKVTEKMLKALGIITCTELYQQR.ALLSLL..  297
DSSP  lleeellllhhhhhhhhllllHHHLLLLLHHHHHHHHHLLLLLHHHHHHLH.HHHHHH..


DSSP  lllllLLLHHHHHHHHHHLLLlhhhLLHH...............................
Query endssVCXSELYALEGAVQGIrwhgLDEA...............................   68
ident                    |                                        
Sbjct .....FSETSWHYFLHISLGL....GSTHltrdgerksmsvertfseinkaeeqyslcqe  348
DSSP  .....LLHHHHHHHHHHHLLL....LLLLlllllllleeeeeeeeeeellhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   68
ident                                                             
Sbjct lcselaqdlqkerlkgrtvtiklknvnfevktrastvssvvstaeeifaiakellkteid  408
DSSP  hhhhhhhhhhllllllleeeeeeellllleellllllllllllhhhhhhhhhhhhhhhhh


DSSP  .......hhhhhhhhhhhll
Query .......kkielkkfhqsle   81
ident                     
Sbjct adfphplrlrlmgvrissfp  428
DSSP  lllllllleeeeeeeeelll


No 7: 2B3OA  MOLECULE: TYROSINE-PROTEIN PHOSPHATASE, NON-RECEPTOR TYPE            

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct vrwfhrdlsgldaetllkgrgvhgsflarpsrknqgdfslsvrvgdqvthiriqnsgdfy   60
DSSP  lllllllllhhhhhhhhhhhlllleeeeeelllllleeeeeeeelleeeeeeeellllle


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct dlyggekfatltelveyytqqqgvlqdrdgtiihlkyplncsdptserwyhghmsggqae  120
DSSP  eelllleellhhhhhhhhhllllllllllllllllleelllllhhhlllllllllhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct tllqakgepwtflvreslsqpgdfvlsvlsdqpksplrvthikvmceggrytvggletfd  180
DSSP  hhhhhhlllleeeeeellllllleeeeeeeeeellleeeeeeeellllllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct sltdlvehfkktgieeasgafvylrqpyyatrvnaadienrfweefeslqkqevknlhqr  240
DSSP  lhhhhhhhhhhhleellllleellleellllllllhhhllllhhhhhhhhllllllllll


DSSP  ......................................llllllllhHHHHhhHLLLlLL
Query ......................................lselpnigkVLEQdlIKAGiKT   22
ident                                                 |      |    
Sbjct legqrpenkgknryknilpfdhsrvilqgrdsnipgsdyinanyiknQLLGpdENAK.TY  299
DSSP  lhhhlllhhhhlllllllllllllllllllllllllllllleeeellLLLLllLLLL.LE


DSSP  HH..........................................................
Query PV..........................................................   24
ident                                                             
Sbjct IAsqgcleatvndfwqmawqensrvivmttrevekgrnkcvpywpevgmqraygpysvtn  359
DSSP  EEelllllllhhhhhhhhhhhllleeeelllleelleellllllllllleeelllleeee


DSSP  ............................................................
Query ............................................................   24
ident                                                             
Sbjct cgehdtteyklrtlqvspldngdlireiwhyqylswpdhgvpsepggvlsfldqinqrqe  419
DSSP  eeeeellleeeeeeeeelhhhlllleeeeeeeellllllllllllhhhhhhhhhhhhhhh


DSSP  .................hhhhLHHHHHHHHHHLLLLL.LLLHhHHHHHHHHLL.llhhhL
Query .................elkdVGSKEAFLRIWENDSS.VCXSeLYALEGAVQG.irwhgL   65
ident                                                   |         
Sbjct slphagpiivhcsagigrtgtIIVIDMLMENISTKGLdCDID.IQKTIQMVRAqrsgmvQ  478
DSSP  hlllllleeeellllllhhhhHHHHHHHHHHHHHLLLlLLLL.HHHHHHHHLLllllllL


DSSP  LHHHHHHHHHHHHHLL..........
Query DEAKKIELKKFHQSLE..........   81
ident  ||                       
Sbjct TEAQYKFIYVAIAQFIettkkklevl  504
DSSP  LHHHHHHHHHHHHHHHhhhlllllll


No 8: 1HLVA  MOLECULE: MAJOR CENTROMERE AUTOANTIGEN B;                            

DSSP  ..................................................llllllllhh
Query ..................................................lselpnigkv   10
ident                                                             
Sbjct mgpkrrqltfreksriiqeveenpdlrkgeiarrfnippstlstilknkrailaserkyg   60
DSSP  lllllllllhhhhhhhhhhhhhlllllhhhhhhhhlllhhhhhhhhhlhhhhhhhhhhhh


DSSP  hhhhhhllllllhhhhHHLHHHHHHHHHHLLLLLLLLHHHHHHHHHHLL...llhHHLLH
Query leqdlikagiktpvelKDVGSKEAFLRIWENDSSVCXSELYALEGAVQG...irwHGLDE   67
ident                         |  |      |    |                    
Sbjct vastcrktnklspydkLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEelgmddFTASN  120
DSSP  hhhhllllllllllhhHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHhhllllLLLLH


DSSP  HHHHHHHHHHHhll
Query AKKIELKKFHQsle   81
ident               
Sbjct GWLDRFRRRRS...  131
DSSP  HHHHHHHHHLL...


No 9: 2QFCA  MOLECULE: PLCR PROTEIN;                                              

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct aeklgseikkirvlrgltqkqlsenichqsevsriesgavypsmdilqgiaaklqipiih   60
DSSP  lhhhhhhhhhhhhhhlllllllllllllhhhhhhhhlllllllhhhhhhhllllllllhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct fyevliysdierkkqfkdqvimlckqkrykeiynkvwnelkkeeyhpefqqflqwqyyva  120
DSSP  hhhhhhhhhhhhhhhhhhhhhhhhhlllhhhhhhhhhhhhhlllllhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct ayvlkkvdyeycilelkkllnqqltgidvyqnlyienaianiyaengylkkgidlfeqil  180
DSSP  hhhhllllhhhhhhhhhhhhllllllllllhhhhhhhhhhhhhhhlllhhhhhhhhhhhh


DSSP  ................llllllllhhhhhHHHLLLL..LLHH........hhhhlHHHHH
Query ................lselpnigkvleqDLIKAGI..KTPV........elkdvGSKEA   34
ident                                       |                     
Sbjct kqlealhdneefdvkvrynhakalyldsrYEESLYQvnKAIEiscrinsmaligqLYYQR  240
DSSP  hhhhhllllhhhhhhhhhhhhhhhhhlllHHHHHHHhhHHHHhhhhllllllhhhHHHHH


DSSP  HHHHHLLLLLL..LLHHHHHHHHHhllllHHHLLHHHHHHHHHHHHHLl
Query FLRIWENDSSV..CXSELYALEGAvqgirWHGLDEAKKIELKKFHQSLe   81
ident                                    | |  |      | 
Sbjct GECLRKLEYEEaeIEDAYKKASFF....fDILEMHAYKEALVNKISRL.  284
DSSP  HHHHHHLLLLHhhHHHHHHHHHHH....hHHLLLHHHHHHHHHHHHHL.


No 10: 2OOEA  MOLECULE: CLEAVAGE STIMULATION FACTOR 77 KDA SUBUNIT;                

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct maekkleenpydldawsilireaqnqpidkarktyerlvaqfpssgrfwklyieaeikak   60
DSSP  lhhhhhhhllllhhhhhhhhhhhhlllhhhhhhhhhhhhllllllhhhhhhhhhhhhhll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct nydkveklfqrclmkvlhidlwkcylsyvretkgklpsykekmaqaydfaldkigmeims  120
DSSP  lhhhhhhhhhhhllllllhhhhhhhhhhhhhhllllllhhhhhhhhhhhhhhhlllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct yqiwvdyinflkgveavgsyaenqritavrrvyqrgcvnpminieqlwrdynkyeegini  180
DSSP  hhhhhhhhhhhhhllllllllhhhhhhhhhhhhhhhlllllllhhhhhhhhhhhhhhhlh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct hlakkmiedrsrdymnarrvakeyetvmkgldrnapsvppqpqeaqqvdmwkkyiqweks  240
DSSP  hhhhhhhhllhhhhhhhhhhhhhhhhhhhhlllllllllllllhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct nplrtedqtlitkrvmfayeqcllvlghhpdiwyeaaqyleqsskllaekgdmnnaklfs  300
DSSP  llllllllhhhhhhhhhhhhhhhhhhlllhhhhhhhhhhhhhhhhhhhlllllhhhhhhh


DSSP  ........................................................llll
Query ........................................................lsel    4
ident                                                             
Sbjct deaaniyeraistllkknmllyfayadyeesrmkyekvhsiynrllaiedidptlvyiqy  360
DSSP  hhhhhhhhhhllllllllhhhhhhhhhhhhhlllhhhhhhhhhhhhhlllllhhhhhhhh


DSSP  llllhhhhHHHHllLLLL.HHHH.....hhlHHHHHHHHHHLLLLLLL..LHHHHHHHHh
Query pnigkvleQDLIkaGIKT.PVEL.....kdvGSKEAFLRIWENDSSVC..XSELYALEGa   56
ident               |                    | |                      
Sbjct mkfarraeGIKS..GRMIfKKARedartrhhVYVTAALMEYYCSKDKSvaFKIFELGLK.  417
DSSP  hhhhhhhhHHHH..HHHHhHHHHlllllllhHHHHHHHHHHHHLLLHHhhHHHHHHHHH.


DSSP  hllllHHHLLHHHHHHHHHHHHHLL...................................
Query vqgirWHGLDEAKKIELKKFHQSLE...................................   81
ident        |               |                                    
Sbjct .....KYGDIPEYVLAYIDYLSHLNednntrvlfervltsgslppeksgeiwarflafes  472
DSSP  .....HHLLLHHHHHHHHHHHLLLLlhhhhhhhhhhhhhlllllhhhlhhhhhhhhhhhh


DSSP  ........................................................
Query ........................................................   81
ident                                                         
Sbjct nigdlasilkvekrrftafreeyegketallvdrykfmdlypcsaselkalgykdv  528
DSSP  hlllhhhhhhhhhhhhhhlhhhhlllhhhhhhhhllllllllllhhhhhlllllll


No 11: 1S1IK  MOLECULE: 5.8S/25S RIBOSOMAL RNA;                                    

DSSP  ..........................llllllLLHHHHHHhhllllLLHH.........h
Query ..........................lselpnIGKVLEQDlikagiKTPV.........e   25
ident                                                |            
Sbjct lylravggevgasaalapkigplglspkkvgeDIAKATKE.fkgikVTVQlkiqnrqaaa   59
DSSP  leeeelllllllllllhhhhhhhlllhhhhhhHHHHHLLL.lllllEEEEleelllllee


DSSP  HHHLHHHHHHHHHHLL.............lLLLLLHHHHHHHHHHLL.llhhHLLHhHHH
Query LKDVGSKEAFLRIWEN.............dSSVCXSELYALEGAVQG.irwhGLDEaKKI   71
ident                                     |                |      
Sbjct SVVPSASSLVITALKEpprdrkkdknvkhsGNIQLDEIIEIARQMRDksfgrTLAS.VTK  118
DSSP  LLLLLHHHHHHHHHLLllllllllllllllEELLHHHHHHHHHHHLLlllllLHHH.HHH


DSSP  HHHHHHHHLL...
Query ELKKFHQSLE...   81
ident |     ||     
Sbjct EILGTAQSVGcrv  131
DSSP  HHHHHHHHHLeel


No 12: 1Q1VA  MOLECULE: DEK PROTEIN;                                               

DSSP  ......lllllllLHHHHHHHHLllLLLHHhHHHLHHHHHHHHHHLLLLL.....lLLHH
Query ......lselpniGKVLEQDLIKagIKTPVeLKDVGSKEAFLRIWENDSS.....vCXSE   49
ident                 |     |        |  |  |       ||             
Sbjct deplikklkkpptDEELKETIKK.lLASAN.LEEVTMKQICKKVYENYPTydlterKDFI   58
DSSP  lllllllllllllHHHHHHHHHH.hHLLLL.HHHLLHHHHHHHHHHHLLLllllhhHHHH


DSSP  HHHHHHHHLLLlhhhllhhhhhhhhhhhhhll
Query LYALEGAVQGIrwhgldeakkielkkfhqsle   81
ident                                 
Sbjct KTTVKELISLE....................h   70
DSSP  HHHHHHHHHLL....................l


No 13: 1M2VB  MOLECULE: PROTEIN TRANSPORT PROTEIN SEC23;                           

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct fltpaqeqlhqqirpmnqlypidlltelpppitdltlpppplvippermlvpselsnasp   60
DSSP  lllhhhhhhhhhlllllllleeellllllllllhhhlllllllllhhhllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct dyirstlnavpknssllkksklpfglvirpyqhlyddidppplnedglivrcrrcrsymn  120
DSSP  lleeelllleellhhhhhhhlllleeeelllllllllllllleellllllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct pfvtfieqgrrwrcnfcrlandvpmqmdqsdpndpksrydrneikcavmeymapkeytlr  180
DSSP  llleeelllleeelllllleeellhhhlllllllhhhhhhlhhhhlleeeeellhhhlll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct qpppatycflidvsqssiksgllattintllqnldsipnhdertrisilcvdnaihyfki  240
DSSP  lllllleeeeeellhhhhhllhhhhhhhhhhhlllllllllllleeleeeellleeeeel


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct pldqinmmdiadleepflprpnsmvvslkacrqnietlltkipqifqsnlitnfalgpal  300
DSSP  llllleeeeellllllllllllllleellllhhhhhhhhhhhhhhllllllllllhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct ksayhliggvggkiivvsgtlpnlgigklqrrnentsketaqllscqdsfyknftidcsk  360
DSSP  hhhhhhhlllleeeeeeellllllllllllllllllllhhhhhllllllhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct vqitvdlflasedymdvaslsnlsrftagqthfypgfsgknpndivkfstefakhismdf  420
DSSP  hleeeeeeeeelllllhhhhhhhhhllllleeeeellllllhhhhhhhhhhhhhhhhlll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct cmetvmrargstglrmsrfyghffnrssdlcafstmprdqsylfevnvdesimadycyvq  480
DSSP  eeeeeeeeeellleeeeeeellllllllleeeeeeellllleeeeeeellllllleeeee


DSSP  .............................lllllllLHHHHHhhhllllLLHH.......
Query .............................lselpniGKVLEQdlikagiKTPV.......   24
ident                                                     |       
Sbjct vavllslnnsqrririitlamptteslaevyasadqLAIASF.....ynSKAVekalnss  535
DSSP  eeeeeeellleeeeeeeeeeeeeellhhhhhhlllhHHHHHH.....hhHHHHhhhhhll


DSSP  ..HHHHLHHhHHHHHHHLLLL.................llLLHHHHHHHHHHLL......
Query ..ELKDVGSkEAFLRIWENDS.................svCXSELYALEGAVQG......   59
ident                |                                            
Sbjct ldDARVLIN.KSVQDILATYKkeivvsntaggaplrlcanLRMFPLLMHSLTKHmafrsg  594
DSSP  lhHHHHHHH.HHHHHHHHHHHhhlllllllllllleeehhHLLHHHHHHHHHLLllllll


DSSP  ........................LLHH................................
Query ........................IRWH................................   63
ident                                                             
Sbjct ivpsdhrasalnnleslplkylikNIYPdvyslhdmadeaglpgtivlpqpinatsslfe  654
DSSP  lllhhhhhhhhhhhhhllhhhhhhHHLLeeeellllllllllllllllllllllllllll


DSSP  ............................................................
Query ............................................................   63
ident                                                             
Sbjct ryglylidngnelflwmggdavpalvffnqrvrniinqlrnhddvityqslyivrareva  714
DSSP  llleeeeellleeeeeellllllhhhllhhhhhhhhhhllllllllllleeeeelllhhh


DSSP  .........HLLHH.....HHHHHHHHHHHLL..
Query .........GLDEA.....KKIELKKFHQSLE..   81
ident                       |           
Sbjct tlrlwasstLVEDKilnneSYREFLQIMKARIsk  748
DSSP  hhhhhhhhlLLLLLlllllLHHHHHHHHHHHHll


No 14: 2DOAA  MOLECULE: RNA POLYMERASE II ELONGATION FACTOR ELL;                   

DSSP  llllllllhhhhhhhhllllllhHHHHHLHHHHHHHHHHLLLlLLLLHHHHHHHHHHLll
Query lselpnigkvleqdlikagiktpVELKDVGSKEAFLRIWENDsSVCXSELYALEGAVQgi   60
ident                                    |            ||          
Sbjct ..................gssgsSGVSQRPFRDRVLHLLALR.PYRKAELLLRLQKDG..   39
DSSP  ..................lllllLLLLLLLHHHHHHHHHHHL.LEEHHHHHHHHHHHL..


DSSP  lhhhlLHHHHHHHHHHHHHLL.......................................
Query rwhglDEAKKIELKKFHQSLE.......................................   81
ident        | |  |    |                                          
Sbjct ....lTQADKDALDGLLQQVAnmsakdgtctlqdcmykdvqkdwpgysegdqqllkrvlv   95
DSSP  ....lLHHHHHHHHHHHHHLLeellllleeellllhhhhllllllllllhhhhhhhhhhh


DSSP  .........
Query .........   81
ident          
Sbjct rklsgpssg  104
DSSP  hhlllllll


No 15: 1VB5A  MOLECULE: TRANSLATION INITIATION FACTOR EIF-2B;                      

DSSP  llllllllhhhhhhhhllllllhhhhhhLHHHHHHHHHHLL......LLLLLLHHHHHHH
Query lselpnigkvleqdlikagiktpvelkdVGSKEAFLRIWEN......DSSVCXSELYALE   54
ident                                 |                     |     
Sbjct ..........................lpERVLEILREMKRErikgasWLAKKGAEAFLTL   34
DSSP  ..........................llHHHHHHHHHHHHLllllhhHHHHHHHHHHHHH


DSSP  HHHLlllhHHLLHHHHHHHHHHHHHLL.................................
Query GAVQgirwHGLDEAKKIELKKFHQSLE.................................   81
ident           | |    ||                                         
Sbjct AEEL...dESLLEDAIMELREEVVKVNpsmaslynlarfipvtnrrdilksraleflrrm   91
DSSP  HHHL...lLLLHHHHHHHHHHHHHHHLlllhhhhhhhhhllllllhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct eeakrelasigaqliddgdviithsfsstvleiirtakerkkrfkviltesspdyeglhl  151
DSSP  hhhhhhhhhhhhhhlllleeeelllllhhhhhhhhhhhhlllleeeeeellllllhhhhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct arelefsgiefevitdaqmglfcreasiaivgadmitkdgyvvnkagtyllalachenai  211
DSSP  hhhhhhlllleeeelhhhhhhhhlllleeeellleellllleeeellhhhhhhhhhhlll


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct pfyvaaetykfhptlksgdvmlmerdlirgnvrirnvlfdvtpwkyvrgiitelgivipp  271
DSSP  leeeellhhhllllllhhhlllllllleelleellllleeeelhhhlleeeelleeelll


DSSP  ...
Query ...   81
ident    
Sbjct rdi  274
DSSP  lll


No 16: 1NG6A  MOLECULE: HYPOTHETICAL PROTEIN YQEY;                                 

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct msllerlnqdmklymknrekdkltvvrmvkaslqneaiklkkdsltedeeltvlsrelkq   60
DSSP  llhhhhhhhhhhhhhhlllhhhhhhhhhhhhhhhhhhhhlllllllhhhhhhhhhhhhhh


DSSP  .............................lllllllLHHHHHHHHLLLLLlhhHHHH.lH
Query .............................lselpniGKVLEQDLIKAGIKtpvELKD.vG   30
ident                                        |                    
Sbjct rkdslqefsnanrldlvdkvqkeldilevylpeqlsEEELRTIVNETIAE..vGASSkaD  118
DSSP  hhhhhhhhhhhllhhhhhhhhhhhhhhhhhllllllHHHHHHHHHHHHHH..lLLLLhhH


DSSP  HHHHHHHHHLLLLL..lLLHHHHHHHHHHLlllhhhllhhhhhhhhhhhhhll
Query SKEAFLRIWENDSS..vCXSELYALEGAVQgirwhgldeakkielkkfhqsle   81
ident        |                                             
Sbjct MGKVMGAIMPKVKGkadGSLINKLVSSQLS.......................  148
DSSP  HHHHHHHHHHHHLLlllHHHHHHHHHHHLL.......................


No 17: 1KQ8A  MOLECULE: HEPATOCYTE NUCLEAR FACTOR 3 FORKHEAD HOMOLOG 1;            

DSSP  llllllllhhhhhhhhllllllhhhhhhlHHHHHHHHHHLLLlLLLLHHHHHHHHHHLLL
Query lselpnigkvleqdlikagiktpvelkdvGSKEAFLRIWENDsSVCXSELYALEGAVQGI   60
ident                                     |           |           
Sbjct ...........................yiALITMAIRDSAGG.RLTLAEINEYLMGKFPF   32
DSSP  ...........................lhHHHHHHHLLLLLL.LLLHHHHHHHHHHHLLL


DSSP  LhhHLLHhHHHHHHHHHHHLL.......................
Query RwhGLDEaKKIELKKFHQSLE.......................   81
ident                                             
Sbjct FrgSYTG.WRNSVRHNLSLNDcfvkvlrdpsrpwgkdnywmlnp   75
DSSP  HhhLLLL.LHHHHHHHHHHHLlleelllllllllllllleelll


No 18: 2QTVA  MOLECULE: PROTEIN TRANSPORT PROTEIN SEC23;                           

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct dfetnedingvrftwnvfpstrsdansnvvpvgclytplkeydelnvapynpvvcsgphc   60
DSSP  lhhhhhhhhleeellleeellhhhhhhlllleeeeelllllllllleellllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct ksilnpycvidprnsswscpicnsrnhlppqytnlsqenmplelqsttieyitnkpvtvp  120
DSSP  llllllllleelllleeelllllleeellllllllllllllhhhhlleeeeeeeeellll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct pifffvvdltsetenldslkesiitslsllppnaliglitygnvvqlhdlssetidrcnv  180
DSSP  leeeeeeellllhhhhhhhhhhhhhhhllllllleeeeeeelleeeeeellllllleeee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct frgdreyqlealtemltgqkvtpfslnrfflpleqvefklnqllenlspdqwsvpaghrp  240
DSSP  eellllllhhhhhhhhhllllllllhhhhleehhhhhhhhhhhhhhllllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct lratgsalniaslllqgcyknipariilfasgpgtvapglivnselkdplrshhdidsdh  300
DSSP  lllhhhhhhhhhhhhhhhllllleeeeeeellllllllllllllllllllllhhhhhlll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct aqhykkackfynqiaqrvaanghtvdifagcydqigmsemkqltdstggvllltdafsta  360
DSSP  lllhhhhhhhhhhhhhhhhhhleeeeeeeellllllhhhhlhhhhllllleeeelllllh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct ifkqsylrlfakdeegylkmafngnmavktskdlkvqglighasavkktdanniseseig  420
DSSP  hhhhhhhhlllllllllllleeeeeeeeeellleeeeeeellleelllllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct igatstwkmaslspyhsyaiffeianthlaytqfittyqhssgtnrirvttvanqllpfg  480
DSSP  llllleeeeeeellllleeeeeeelllleeeeeeeeeeeellleeeeeeeeeeeeeelll


DSSP  ...lllllllLHHHHHhhhllllLLHH.........hHHHLHhHHHHHHHHLLLLL....
Query ...lselpniGKVLEQdlikagiKTPV.........eLKDVGsKEAFLRIWENDSS....   44
ident                           |                                 
Sbjct tpaiaasfdqEAAAVL.....maRIAVhkaetddgadVIRWL.DRTLIKLCQKYADynkd  534
DSSP  lhhhhhlllhHHHHHH.....hhHHHHhhhllllhhhHHHHH.HHHHHHHHHHHLEeell


DSSP  .........lLLHHHHHHHHHHLL....................................
Query .........vCXSELYALEGAVQG....................................   59
ident                                                             
Sbjct dpqsfrlapnFSLYPQFTYYLRRSqflsvfnnspdetafyrhiftredttnslimiqptl  594
DSSP  eeeeeellllLLLHHHHHHHHHLLlllllllllhhhhhhhhhhhllllhhhhhhhhllee


DSSP  ............................................................
Query ............................................................   59
ident                                                             
Sbjct tsfsmeddpqpvlldsisvkpntillldtfffiliyhgeqiaqwrkagyqddpqyadfka  654
DSSP  eeelllllleellllhhhllllleeeeellleeeeeelhhhhhhhhhlhhhlllllhhhh


DSSP  .................................llhhhLLHH..................
Query .................................irwhgLDEA..................   68
ident                                       |                     
Sbjct lleepkleaaellvdrfplprfidteaggsqarfllskLNPSdnyqdmarggstivltdd  714
DSSP  hhhhhhhhhhhhhllllllleeeeeelllhhhhhhhllLLLLllllllllllllllllll


DSSP  .HHHHHHHHHHHL.....l
Query .KKIELKKFHQSL.....e   81
ident           |        
Sbjct vSLQNFMTHLQQVavsgqa  733
DSSP  lLHHHHHHHHHHHhlllll


No 19: 2IVMA  MOLECULE: TRANSCRIPTIONAL REGULATORY PROTEIN;                        

DSSP  llllllllhhhhhhhhllllllhhhhhhLHHHHHHHHHHLLLLLLLLHHHHHHHHhhlll
Query lselpnigkvleqdlikagiktpvelkdVGSKEAFLRIWENDSSVCXSELYALEGavqgi   60
ident                                     |    |     |||    |     
Sbjct ..........................alDDIDRILVRELAADGRGTLSELATRAG.....   29
DSSP  ..........................llLHHHHHHHHHHHHLLLLLHHHHHHHHL.....


DSSP  lhhhllhhHHHHHHHHHHHLL.......................................
Query rwhgldeaKKIELKKFHQSLE.......................................   81
ident                    ||                                       
Sbjct .......lSVSAVQSRVRRLEsrgvvqgysarinpeavghllsafvaitpldpsqpddap   82
DSSP  .......lLHHHHHHHHHHHHhllleeeeeeeellhhhllleeeeeeeeellllllllhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct arlehieevescysvageesyvllvrvasaraledllqrirttanvrtrstiilntfysd  142
DSSP  hhhllllleeeeeeellllleeeeeeellhhhhhhhhhhhhhhhleeeeeeeeeeeeell


DSSP  .....
Query .....   81
ident      
Sbjct rqhip  147
DSSP  lllll


No 20: 2AU3A  MOLECULE: DNA PRIMASE;                                               

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct mssdidelrreidivdviseylnlekvgsnyrtncpfhpddtpsfyvspskqifkcfgcg   60
DSSP  lllhhhhhhhhllhhhhhhhhllleeelleeeellllllllllleeeelllleeeellll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct vggdaikfvslyedisyfeaalelakrygkkldlekiskdekvyvaldrvcdfyresllk  120
DSSP  leelhhhhhhhhhlllhhhhhhhhhhhhllllllllllhhhhhhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct nreaseyvksrgidpkvarkfdlgyapssealvkvlkendlleayletknllsptkgvyr  180
DSSP  lhhhhhhhhhllllhhhhhhllleelllhhhhhhhhhhhllhhhhhlllleellllllle


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct dlflrrvvipikdprgrvigfggrrivedkspkyinspdsrvfkkgenlfglyeakeyik  240
DSSP  elllleeeeeeellllleeeeeeeelllllllleeellllllllhhhleelhhhhhhhhh


DSSP  ..........................................................LL
Query ..........................................................LS    2
ident                                                             
Sbjct eegfailvegyfdllrlfsegirnvvaplgtaltqnqanllskftkkvyilydgddagRK  300
DSSP  hhlleeelllhhhhhhhhhllllleeeellllllhhhhhhhhlllleeeeellllhhhHH


DSSP  LL..LLLLhhhhhhhhllllllHHHH.......................hHLHHHHHHHH
Query EL..PNIGkvleqdlikagiktPVEL.......................kDVGSKEAFLR   37
ident                       || |                             |    
Sbjct AMksAIPL.....llsagvevyPVYLpegydpdefikefgkeelrrlinsSGELFETLIK  355
DSSP  HHhhHHHH.....hhhllleeeEELLlllllhhhhhhhhlhhhhhhhhhhLLLHHHHHHH


DSSP  HHLLLLLLLLHHHHHHhhhhllllHHHLLHHHHHHHHHHHHHLL...........
Query IWENDSSVCXSELYALegavqgirWHGLDEAKKIELKKFHQSLE...........   81
ident            |                |      |                   
Sbjct TARENLEEKTREFRYY.......lGFISDGVRRFALASEFHTKYkvpmeillmki  403
DSSP  HHHHLHHHHHHHHHHH.......hLLLLLHHHHHHHHHHHHHHHlllhhhhllll


No 21: 1I1GA  MOLECULE: TRANSCRIPTIONAL REGULATOR LRPA;                            

DSSP  llllllllhhhhhhhhllllllhhhhhhLHHHHHHHHHHLLLLLLLLHHHHHHHHhhlll
Query lselpnigkvleqdlikagiktpvelkdVGSKEAFLRIWENDSSVCXSELYALEGavqgi   60
ident                                    | | | |      |     |     
Sbjct ...........................iDERDKIILEILEKDARTPFTEIAKKLG.....   28
DSSP  ...........................lLLHHHHHHHHHHHLLLLLHHHHHHHHL.....


DSSP  lhhhllhhHHHHHHHHHHHLL.......................................
Query rwhgldeaKKIELKKFHQSLE.......................................   81
ident               |    ||                                       
Sbjct .......iSETAVRKRVKALEekgiiegytikinpkklgyslvtitgvdtkpeklfevae   81
DSSP  .......lLHHHHHHHHHHHHhhllllllllllllhhhllleeeeeeeeelhhhhhhhhh


DSSP  ...........................................................
Query ...........................................................   81
ident                                                            
Sbjct klkeydfvkelylssgdhmimaviwakdgedlaeiisnkigkiegvtkvcpaiileklk  140
DSSP  hhhhllleeeelllllllleeeeeeellhhhhhhhhhhllllllleeeeeeeellllll


No 22: 2R8JA  MOLECULE: DNA POLYMERASE ETA;                                        

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct grmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwns   60
DSSP  lllllllhhhhhhhhlllllllllllleeeeeellhhhhhhhhhlllllllleeeeelle


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct iiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakq  120
DSSP  eeeelllhhhhlllllllhhhhhlllllleeeelleeellllleelllllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct isvedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyelt  180
DSSP  llhhheeellhhhhhhhhhhhhhhhhhllleeeeelleeeeelhhhhhhhhhhlllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct gdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvil  240
DSSP  llllhhhhlhhhhhhhhhlllllllllllllhhhhhllllleelllllllllllhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct algsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcg  300
DSSP  hhhhhhhhhhhhhhhhhlllleeeeeellhhhhhhhhhhllllleeellhhhhhhhhlll


DSSP  .......lllllllLHHHHHHHH...lllllLHHHHHHLHHHHHHHHHHLLLLL......
Query .......lselpniGKVLEQDLI...kagikTPVELKDVGSKEAFLRIWENDSS......   44
ident               || |   |            |                         
Sbjct kfeitsfwtlggvlGKELIDVLDlphensikHIRETWPDNAGQLKEFLDAKVKQsdydrs  360
DSSP  lllhhhllllllhhHHHHHHHHLlllllhhhHHHHLLLLLHHHHHHHHHHHLLLllllll


DSSP  ....lLLHHHHHHHHHHLLllhhhLLHH................................
Query ....vCXSELYALEGAVQGirwhgLDEA................................   68
ident              |                                              
Sbjct tsnidPLKTADLAEKLFKL.srgrYGLPlssrpvvksmmsnknlrgkscnsivdciswle  419
DSSP  lllllHHHHHHHHHHHHHH.llllLLLLllllllllleeeeelllllllllhhhhhhhhh


DSSP  ............................................................
Query ............................................................   68
ident                                                             
Sbjct vfcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvg  479
DSSP  hhhhhhhhhhhhhhhhhllllleeeeeeeeellllleeeeeeelllllllllllhhhhhh


DSSP  ...................hhhhhhhhhhhll
Query ...................kkielkkfhqsle   81
ident                                 
Sbjct ikfvtdldikgknksyypltklsmtitnfdii  511
DSSP  hhhhhhhhhhlllllllllleeeeeeeeelll


No 23: 1CF7B  MOLECULE: PROTEIN (TRANSCRIPTION FACTOR E2F-4);                      

DSSP  llllllllhhhhhhhhllllllhhhhhhlhhHHHHHHHHLLLLLLLLHHHHHHHHHHLLL
Query lselpnigkvleqdlikagiktpvelkdvgsKEAFLRIWENDSSVCXSELYALEGAVQGI   60
ident                                                 |           
Sbjct ........................gkglrhfSMKVCEKVQRKGTTSYNEVADELVSEFTN   36
DSSP  ........................llhhhhhHHHHHHHHHHHLEELHHHHHHHHHHHHHL


DSSP  .......lhhHLLHHHHHHHHHHHHHLL..................
Query .......rwhGLDEAKKIELKKFHQSLE..................   81
ident                           |                   
Sbjct snnhlaadsaYDQKNIRRRVYDALNVLMamniiskekkeikwiglp   82
DSSP  lllllhhhlhHHHHHHHHHHHHHHHHHHhlllllllllleelllll