DaliLite: Structural Neighbours

Query: 2OX7D MOLECULE: HYPOTHETICAL PROTEIN;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  2OX7-A 22.6  0.8  143   144  100   HYPOTHETICAL PROTEIN;                                      "         
   2:  2P84-A  9.5  4.7  104   133   36   ORF041;                                                    "         
   3:  2I2L-A  9.1  3.3  112   130   20   YOPX PROTEIN;                                              "         
   4:  3BTA-A  2.5  6.2   77  1277   12   PROTEIN (BOTULINUM NEUROTOXIN TYPE A);                     "         
   5:  2D1X-A  2.2  2.1   38    60   11   CORTACTIN ISOFORM A;                                       "         
-

No 1: 2OX7A  MOLECULE: HYPOTHETICAL PROTEIN;                                      

DSSP  LLLLLEEEEELLLLEEEEEEEEEELLLLLEEEEEEEEEELLLLLLLLEEEEEEEEHHHLL
Query SLIPKFRAWDTYEKEXLENVTPLFDDSNSXIAIITDFQIKGSPGTSEIEIGSYDTTFNWD   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct SLIPKFRAWDTYEKEXLENVTPLFDDSNSXIAIITDFQIKGSPGTSEIEIGSYDTTFNWD   60
DSSP  LLLLLEEEEELLLLEEEEEEEEEELLLLLEEEEELLEEEEEELLEEEEEELLEEEHHHLL


DSSP  LLLEEEEEEEEEELLLLLEEELLEEEEELLLLLLLLLLLEEEEEEELLEEEELLLLLLLL
Query EFPYVIXQSTGLKDKNGVEIFEGDILVYDAPKKYAHRRSXHEIAYADGRFFWEFLDLVFC  120
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct EFPYVIXQSTGLKDKNGVEIFEGDILVYDAPKKYAHRRSXHEIAYADGRFFWEFLDLVFC  120
DSSP  LLLEEEEEEEEEELLLLLEEELLEEEEELLLLLLLLLLLEEEEEEELLEEEELLLLLLLL


DSSP  HHHHHLLLLEEEEEELLLLLLLL.
Query QSNILYRDGYLVIGNIHENPELL.  143
ident ||||||||||||||||||||||| 
Sbjct QSNILYRDGYLVIGNIHENPELLe  144
DSSP  HHHHHLLLLEEEEEELLLLLLLLl


No 2: 2P84A  MOLECULE: ORF041;                                                    

DSSP  llLLLEEEEELLLL......EEEEeEEEEELLLLleeEEEEEEeelllllllleeeeeee
Query slIPKFRAWDTYEK......EXLEnVTPLFDDSNsxiAIITDFqikgspgtseieigsyd   54
ident   |||||  |                     |      |  |                  
Sbjct .lIPKFREFDRERHrtdyqkGMSY.AEQQDFDMG..fTIWFDH............iedld   44
DSSP  .lLLLEEEELHHHHhlllllLEEE.LEEEEELLE..eEEELLL............lllhh


DSSP  ehhhlLLLLEEEEEEEEEELLLLLEEELLEEEEELLlllllllLLEEEEEEELLEEEELL
Query ttfnwDEFPYVIXQSTGLKDKNGVEIFEGDILVYDApkkyahrRSXHEIAYADGRFFWEF  114
ident               ||||||||  || | ||                     || |    
Sbjct liekdGTINRIVMMSTGLKDKNVKEIYESDIVRNLY.......GELYVVEWLDGSFVLTE   97
DSSP  hllllLLLLLEEEEEEEEELLLLLEEELLEEEEELL.......LLEEEEEEELLEEEEEE


DSSP  .....LLLLLLHhHHHLlllEEEEEELLLLLLLL......
Query .....LDLVFCQsNILYrdgYLVIGNIHENPELL......  143
ident       |             | | ||| ||||||      
Sbjct fynggYDHYIID.SSTE...YEVLGNIYENPELLeddnha  133
DSSP  lllllLEEELLL.HHHH...EEEEEELLLLHHHHllllll


No 3: 2I2LA  MOLECULE: YOPX PROTEIN;                                              

DSSP  lLLLLEEEEELllLEEEEE....eEEEELLLLLEeEEEEEEEelllllllleEEEEEEeh
Query sLIPKFRAWDTyeKEXLEN....vTPLFDDSNSXiAIITDFQikgspgtseiEIGSYDtt   56
ident       | ||     |                                            
Sbjct .XNTAYRVWDG..EQXHYWddeglSLIIKSNGDW.TLKRLYT..........DVLVPV..   44
DSSP  .LLLLEEEELL..LLEEELlllllEEEELLLLLE.EEEEELL..........LLEEEE..


DSSP  hhllLLLEEEEEEEEEElllLLEEELlEEEEEL.LLLLllllLLEEEEEEELLEEEELLL
Query fnwdEFPYVIXQSTGLKdknGVEIFEgDILVYD.APKKyahrRSXHEIAYADGRFFWEFL  115
ident           |         |  |      |      |        |    || |     
Sbjct vdstNRNAALXWGAKVR...GKFIYD.RSIVKItSDDK..esSDVCEVKFSDGVFQVDVS   98
DSSP  eellLLLLEEEELEEEL...LEEELL.EEEEEEeLLLL..llLLEEELEEELLEEEEELL


DSSP  ..LLLLLHHHhhLLLLEEEEEELLLLLLLL....
Query ..DLVFCQSNilYRDGYLVIGNIHENPELL....  143
ident   |               |||    |||||    
Sbjct kyDVTAVGWV..EYATIEVIGDVYQNPELLegvk  130
DSSP  llLEEEHHHL..LLEEEEEEEELLLLLLLLllll


No 4: 3BTAA  MOLECULE: PROTEIN (BOTULINUM NEUROTOXIN TYPE A);                     

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct pfvnkqfnykdpvngvdiayikipnvgqmqpvkafkihnkiwviperdtftnpeegdlnp   60
DSSP  llllllllllllllllleeeeellllllllleeeeeeelleeeeeeelllllhhhlllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct ppeakqvpvsyydstylstdnekdnylkgvtklferiystdlgrmlltsivrgipfwggs  120
DSSP  lllllllllllllllllllhhhhhhhhhhhhhhhhhhhllhhhhhhhhhhhhllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct tidtelkvidtncinviqpdgsyrseelnlviigpsadiiqfecksfghevlnltrngyg  180
DSSP  lllllllllhhheeeeellllleeeeelleeeeelllllllleeelllllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct stqyirfspdftfgfeeslevdtnpllgagkfatdpavtlahelihaghrlygiainpnr  240
DSSP  lleeeelllleeleellllhhhllllllllleellhhhhhhhhhhhhhhhhlllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct vfkvntnayyemsglevsfeelrtfgghdakfidslqenefrlyyynkfkdiastlnkak  300
DSSP  llllllllllllllllllhhhhhhhlllhhhhllhhhhhhhhhhhhhhhhhhhhhhhlll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct sivgttaslqymknvfkekyllsedtsgkfsvdklkfdklykmlteiytednfvkffkvl  360
DSSP  llllllllhhhhhhhhhhhhlleellllleellhhhhhhhhhhhhhlllhhhhhhhllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct nrktylnfdkavfkinivpkvnytiydgfnlrntnlaanfngqnteinnmnftklknftg  420
DSSP  lllllllllllleellllllllllllllllllllllllllhhhlllllhhhleellllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct lfefykllcvrndlcikvnnwdlffspsednftndlnkgeeitsdtnieaaeenisldli  480
DSSP  lllleeeeeelllleeeeehhhllllllllllllllllleeellllllllllllllhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct qqyyltfnfdnepenisienlssdiigqlelmpnierfpngkkyeldkytmfhylraqef  540
DSSP  hhhhhllllllllllllllllllllllllllllllllllllleeeellllhhhhhhllll


DSSP  ...............................llllleeeeelllleeeeeeeeeelllll
Query ...............................slipkfrawdtyekexlenvtplfddsns   29
ident                                                             
Sbjct ehgksrialtnsvneallnpsrvytffssdyvkkvnkateaamflgwveqlvydftdets  600
DSSP  lllllllllllllhhhhlllllllllllhhhhhhhlllllllllhhhhhhhhhhhhhhll


DSSP  eeeeeeEEEE..............................lLLLLL..............
Query xiaiitDFQI..............................kGSPGT..............   45
ident                                                             
Sbjct evsttdKIADitiiipyigpalnignmlykddfvgalifsgAVILLefipeiaipvlgtf  660
DSSP  llllllLLLLlllllhhhllllllllllllllhhhhhhhhlHHHHLllllllllllllle


DSSP  ............................................................
Query ............................................................   45
ident                                                             
Sbjct alvsyiankvltvqtidnalskrnekwdevykyivtnwlakvntqidlirkkmkealenq  720
DSSP  eellllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhlhhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   45
ident                                                             
Sbjct aeatkaiinyqynqyteeeknninfniddlssklnesinkamininkflnqcsvsylmns  780
DSSP  hhhlllhhhhhhllllllllllllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   45
ident                                                             
Sbjct mipygvkrledfdaslkdallkyiydnrgtligqvdrlkdkvnntlstdipfqlskyvdn  840
DSSP  lhhhhhhhhhhhhhhhhhhhhhhhhllllllhhhllhhhhhhhhhllllllllhhhllll


DSSP  ...............lleeeEEEE.............ehhHLLLLLEE............
Query ...............seieiGSYD.............ttfNWDEFPYV............   65
ident                                                             
Sbjct qrllstfteyikniintsilNLRYesnhlidlsryaskinIGSKVNFDpidknqiqlfnl  900
DSSP  hhhhhhhhhhhhlhhhhlleEEEEelleeeelllleeeeeELLLLEELllllleeeeell


DSSP  ............................................................
Query ............................................................   65
ident                                                             
Sbjct esskievilknaivynsmyenfstsfwiripkyfnsislnneytiincmennsgwkvsln  960
DSSP  lllleeeeellllllhhhhlleeeeeeeelllllllllllleeeeeelllllllleeeee


DSSP  ............................................................
Query ............................................................   65
ident                                                             
Sbjct ygeiiwtlqdtqeikqrvvfkysqminisdyinrwifvtitnnrlnnskiyingrlidqk 1020
DSSP  lleeeeeeellllleeeeeeellllllllllllleeeeeeeelllleeeeeelleeeeee


DSSP  ...................................................eeeeeEEEL
Query ...................................................ixqstGLKD   74
ident                                                          |||
Sbjct pisnlgnihasnnimfkldgcrdthryiwikyfnlfdkelnekeikdlydnqsnsgILKD 1080
DSSP  ellllllllllleeeeeeellllllleeeeeeeeeelllllhhhhhhhhhhlllllLLLL


DSSP  LLLLEEELLEEEEEL...LLLL................LLLL...............LLE
Query KNGVEIFEGDILVYD...APKK................YAHR...............RSX  100
ident   |                | |                                      
Sbjct FWGDYLQYDKPYYMLnlyDPNKyvdvnnvgirgymylkGPRGsvmttniylnsslyrGTK 1140
DSSP  LLLLLLLLLLLEEELlllLLLLeeeelllllllleeeeLLLLlllllllllllllllLLE


DSSP  EEEEEELL...........EEEELL..................................l
Query HEIAYADG...........RFFWEF..................................l  115
ident   |                |                                        
Sbjct FIIKKYASgnkdnivrnndRVYINVvvknkeyrlatnasqagvekilsaleipdvgnlsq 1200
DSSP  EEEELLLLlllllllllllEEEEEEeelleeeeeelllllllllllleeellllllllll


DSSP  llLLLH.................................................hhhhl
Query dlVFCQ.................................................snily  126
ident   |                                                         
Sbjct vvVMKSkndqgitnkckmnlqdnngndigfigfhqfnniaklvasnwynrqierssrtlg 1260
DSSP  leEELLllllllllllleeelllllllleeeeeelllllleeeeehhhhhhlllllllll


DSSP  LLLEEEEEellllllll
Query RDGYLVIGnihenpell  143
ident                  
Sbjct CSWEFIPVddgwgerpl 1277
DSSP  LLLLEELLlllllllll


No 5: 2D1XA  MOLECULE: CORTACTIN ISOFORM A;                                       

DSSP  llllLEEEEELLL.............LEEEEEEEEEElllllEEEEEEeeeellllllll
Query slipKFRAWDTYE.............KEXLENVTPLFddsnsXIAIITdfqikgspgtse   47
ident        |   |                   |                            
Sbjct .ndlGITAVALYDyqaagddeisfdpDDIITNIEMID.....DGWWRG..........vc   44
DSSP  .lllLLLEEELLLlllllllllllllLLEEEEEELLL.....LLEEEE..........ee


DSSP  eeeEEEEEhhhlllLLEEEEEeeeeellllleeelleeeeellllllllllleeeeeeel
Query ieiGSYDTtfnwdeFPYVIXQstglkdkngveifegdilvydapkkyahrrsxheiayad  107
ident                     |                                       
Sbjct kgrYGLFP.....aNYVELRQ.......................................   60
DSSP  lleEEEEE.....hHHEEELL.......................................


DSSP  leeeellllllllhhhhhlllleeeeeellllllll
Query grffwefldlvfcqsnilyrdgylvignihenpell  143
ident                                     
Sbjct ....................................   60
DSSP  ....................................