CE Algorithm, version 1.00, 1998.

Chain 1: pdb1ymy.ent:B (Size=382) 
Chain 2: pdb2gwn.ent:A (Size=452)

Alignment length = 300 Rmsd = 3.09A Z-Score = 5.6 Gaps = 173(57.7%) CPU = 21s Sequence identities = 15.3%

Chain 1:    1 MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAE----LPPEIEQRSLNGAILSPGFIDVQLNGCGGV
Chain 2:    5 KILLRNALITNEGKTFP-GSVXIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHF----

Chain 1:   67 QFNDTA--EAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPW
Chain 2:   70 REPGLTHKA-----TIASESRAAVAGGVTSFXDXPNTNPPTTXWERLLEKRQIGADTAWANYGFFFGGTN

Chain 1:  135 LNLVKKGTHNPNFVRKPDAALVDFLCENA-DVITKVTLAP-----------EMVPAEVISKLANAGIVVS
Chain 2:  135 -------------------DNIDEIKRVDKHLVPGLXLFLGSSTGNXLVDNKETLEKIFGECD---LLIA

Chain 1:  193 AGHSN-----------------------------------ATLKEAKAGFRA-GITFATHLYNAMPYITG
Chain 2:  183 THCEKEEIIRANKEHYKAKYGNDLDIHFHPLIRSEEACYRSSAEAVELAERXNARLHILHLST-------

Chain 1:  227 REPGLAGAILDEA--------DIYCGIIAD---GL----------------HVD---YANIRNAKRLKGD
Chain 2:  246 -----EKELSLFRNDIPTAQKRITSEVCVHHLWFSDTDYGRLGNRIKWNPAIKKESDREALRAAVRNGR-

Chain 1:  267 KLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLT--MIEGVRNLVEHCGIALDEVLRM
Chain 2:  310 IDIIATDHAP----------------HLLREKEGSCLQAASGGPLVQHSLLALLELCNQGIFSIEEIVSK

Chain 1:  335 ATLYPARAIGVEKRLGTLAAGKVANLTAFTP-------------------------DFKITKTIVNGNEV
Chain 2:  364 TAHIPATLFAI-EKRGYIRPGYYADLVLVDPSSPHTVSADNILSLCGWSPFEGFTFSHSVAYTFVNGCLA

Chain 1:  380 VTQ
Chain 2:  433 YAK

     X2 = ( 0.700609)*X1 + ( 0.176873)*Y1 + (-0.691276)*Z1 + (   91.398408)
     Y2 = ( 0.689949)*X1 + ( 0.079153)*Y1 + ( 0.719517)*Z1 + (  -10.365235)
     Z2 = ( 0.181980)*X1 + (-0.981046)*Y1 + (-0.066579)*Z1 + (   54.293340)