DaliLite: Structural Neighbours

Query: 1T3UC MOLECULE: CONSERVED HYPOTHETICAL PROTEIN;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1T3U-A 13.7  0.2   92    92  100   CONSERVED HYPOTHETICAL PROTEIN;                            "         
   2:  2CTK-A  3.1  3.2   43   104    7   VIGILIN;                                                   "         
   3:  2D9X-A  3.0  2.4   40   120   23   OXYSTEROL BINDING PROTEIN-RELATED PROTEIN 11;              "         
   4:  1GHH-A  2.9  3.3   52    81    8   DNA-DAMAGE-INDUCIBLE PROTEIN I;                            "         
   5:  2CTF-A  2.8  3.0   41   102    7   VIGILIN;                                                   "         
   6:  2CTE-A  2.8  3.0   43    94   16   VIGILIN;                                                   "         
   7:  1U7U-A  2.8  1.9   37   198    8   COENZYME A BIOSYNTHESIS BIFUNCTIONAL PROTEIN               "         
   8:  2OAU-A  2.7  2.0   39   254    5   SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL;                "         
   9:  2GEZ-A  2.7  5.5   65   158    9   L-ASPARAGINASE ALPHA SUBUNIT;                              "         
  10:  1JN9-A  2.7  5.1   63   158   11   PUTATIVE L-ASPARAGINASE;                                   "         
  11:  1WE8-A  2.6  3.5   44   104   11   TUDOR AND KH DOMAIN CONTAINING PROTEIN;                    "         
  12:  2BA0-A  2.5  3.2   50   218   12   ARCHEAL EXOSOME RNA BINDING PROTEIN RRP4;                  "         
  13:  1MKM-A  2.3  2.3   39   246    3   ICLR TRANSCRIPTIONAL REGULATOR;                            "         
  14:  2Q3Q-A  2.2  1.5   37   120    8   UNCHARACTERIZED PROTEIN AT1G24000;                         "         
  15:  2FH5-A  2.2  2.5   53   124    9   SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA                 "         
  16:  2DMW-A  2.2  3.9   65   131   11   SYNAPTOBREVIN-LIKE 1 VARIANT;                              "         
  17:  2O66-A  2.1  3.1   36   107    6   PII PROTEIN;                                               "         
  18:  1BB8-A  2.1  1.8   33    71    0   INTEGRASE;                                                 "         
  19:  2HN1-A  2.0  4.0   77   246   21   MAGNESIUM AND COBALT TRANSPORTER;                          "         
  20:  1YK0-A  2.0  3.4   61   394    7   ATRIAL NATRIURETIC PEPTIDE CLEARANCE RECEPTOR;             "         
  21:  1Q8K-A  2.0  2.7   40   300   13   EUKARYOTIC TRANSLATION INITIATION FACTOR 2                 "         
  22:  1J8B-A  2.0  2.7   34    92    9   YBAB;                                                      "         
  23:  1EC6-A  2.0  2.8   38    87    8   RNA-BINDING PROTEIN NOVA-2;                                "         
-

No 1: 1T3UA  MOLECULE: CONSERVED HYPOTHETICAL PROTEIN;                            

DSSP  LEEEELLLLEEEELLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHHH
Query TLTVQILDKEYCINCPDDERANLESAARYLDGKXREIRSSGKVIGADRVAVXAALNITHD   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct TLTVQILDKEYCINCPDDERANLESAARYLDGKXREIRSSGKVIGADRVAVXAALNITHD   60
DSSP  LEEEEELLEEEEELLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHHH


DSSP  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHL
Query LLHRKERLDQESSSTRERVRELLDRVDRALAN   92
ident ||||||||||||||||||||||||||||||||
Sbjct LLHRKERLDQESSSTRERVRELLDRVDRALAN   92
DSSP  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHL


No 2: 2CTKA  MOLECULE: VIGILIN;                                                   

DSSP  .................LEEEELLL..................................l
Query .................TLTVQILD..................................k    9
ident                  |  |                                       
Sbjct gssgssgkealealvpvTIEVEVPFdlhryvigqkgsgirkmmdefevnihvpapelqsd   60
DSSP  lllllllllllllllleEEEEELLHhhhhhhhllllhhhhhhhhhllleeelllllllll


DSSP  EEEELLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLlhhhhhhhhhhhhhhhhhhhhhhhh
Query EYCINCPDDERANLESAARYLDGKXREIRSSGKVIgadrvavxaalnithdllhrkerld   69
ident    |                                                        
Sbjct IIAITGLAANLDRAKAGLLERVKELQAEQEDRALR.........................   95
DSSP  EEEEEELHHHHHHHHHHHHHHHHHHHHHHHHHHHL.........................


DSSP  hhhhhhhhhhhhhhhhhhhhhhl
Query qessstrervrelldrvdralan   92
ident                        
Sbjct ..............sfksgpssg  104
DSSP  ..............lllllllll


No 3: 2D9XA  MOLECULE: OXYSTEROL BINDING PROTEIN-RELATED PROTEIN 11;              

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct gssgssgenvygylmkytnlvtgwqyrffvlnneaglleyfvneqsrnqkprgtlqlaga   60
DSSP  lllllllllleeeeeeeeellleeeeeeeeellllleeeeellhhhlllllleeeellll


DSSP  ..........LEEEE.llLLEEEELLLHH.HHHHHHHHHHHHHHHHHHHHlLLLLllhhh
Query ..........TLTVQ.ilDKEYCINCPDD.ERANLESAARYLDGKXREIRsSGKVigadr   48
ident           | ||       |     |  ||    |          |            
Sbjct vispsdedshTFTVNaasGEQYKLRATDAkERQHWVSRLQICTQHHTEAI.GKNN.....  114
DSSP  leelllllllLEEELlllLLLEEELLLLHhHHHHHHHHHHHHHHHHHHHL.LLLL.....


DSSP  hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhl
Query vavxaalnithdllhrkerldqessstrervrelldrvdralan   92
ident                                             
Sbjct ......................................sgpssg  120
DSSP  ......................................llllll


No 4: 1GHHA  MOLECULE: DNA-DAMAGE-INDUCIBLE PROTEIN I;                            

DSSP  leeeellLLEEEELLLHHH.hHHHHHHHHHHHHHHHHHHLLL..................
Query tltvqilDKEYCINCPDDE.rANLESAARYLDGKXREIRSSG..................   41
ident          |  |              |  |                             
Sbjct ......mRIEVTIAKTSPLpaGAIDALAGELSRRIQYAFPDNeghvsvryaaannlsvig   54
DSSP  ......lEEEEEEELLLLLllLHHHHHHHHHHHHHHHHLLLLlleeeeeeellleeeeel


DSSP  lllLHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhhl
Query kviGADRVAVXAALNITHDLLHrkerldqessstrervrelldrvdralan   92
ident                                                    
Sbjct atkEDKQRISEILQETWESADD........................wfvse   81
DSSP  llhHHHHHHHHHHHHHHHLHHH........................hllll


No 5: 2CTFA  MOLECULE: VIGILIN;                                                   

DSSP  ...........................LEEEELLL.........................
Query ...........................TLTVQILD.........................    8
ident                               |                             
Sbjct gssgssgepeklgqaltevyakansftVSSVAAPSwlhrfiigkkgqnlakitqqmpkvh   60
DSSP  lllllllllllllllllllllllllleEEEEELLLllhhhhhlllllhhhhhhhhlllle


DSSP  .......LEEEELLLHHHHHHHHHHHHHHHHHHHHHhLLLLlllhhhhhhhhhhhhhhhh
Query .......KEYCINCPDDERANLESAARYLDGKXREIrSSGKvigadrvavxaalnithdl   61
ident               |                      |                      
Sbjct ieftegeDKITLEGPTEDVSVAQEQIEGMVKDLINR.SGPS...................  100
DSSP  eeellllLEEEEEELHHHHHHHHHHHHHHHHHHHHH.LLLL...................


DSSP  hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhl
Query lhrkerldqessstrervrelldrvdralan   92
ident                                
Sbjct .............................sg  102
DSSP  .............................ll


No 6: 2CTEA  MOLECULE: VIGILIN;                                                   

DSSP  .................LEEEELLL..................................L
Query .................TLTVQILD..................................K    9
ident                    || |                                     
Sbjct gssgssgdivarlqtqaSATVAIPKehhrfvigkngeklqdlelktatkiqiprpddpsN   60
DSSP  lllllllllllllllleEEEEELLLllhhhhhlllllhhhhhhhhllllllllllllllL


DSSP  EEEELLLHHHHHHHHHHHHHHHHHHHHHhlLLLLLLhhhhhhhhhhhhhhhhhhhhhhhh
Query EYCINCPDDERANLESAARYLDGKXREIrsSGKVIGadrvavxaalnithdllhrkerld   69
ident    |                          ||   |                        
Sbjct QIKITGTKEGIEKARHEVLLISAEQDKR..SGPSSG........................   94
DSSP  EEEEEELHHHHHHHHHHHHHHHHHHHLL..LLLLLL........................


DSSP  hhhhhhhhhhhhhhhhhhhhhhl
Query qessstrervrelldrvdralan   92
ident                        
Sbjct .......................   94
DSSP  .......................


No 7: 1U7UA  MOLECULE: COENZYME A BIOSYNTHESIS BIFUNCTIONAL PROTEIN               

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct pvndlkhlnimitagptrepldpvryisdhssgkmgfaiaaaaarrganvtlvsgpvslp   60
DSSP  lllllllleeeeeelllleeeelleeellllllhhhhhhhhhhhlllleeeeeellllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct tppfvkrvdvmtalemeaavnasvqqqnifigcaavadyraaltikmvknpdivagvaal  120
DSSP  llllleeeelllhhhhhhhhhhhhhhlleeeellllllllllllllllllllhhhhhhll


DSSP  ........................................LEEEELLLLEEEELLLHH.H
Query ........................................TLTVQILDKEYCINCPDD.E   19
ident                                          |     |            
Sbjct kdhrpyvvgfaaetnnveeyarqkrirknldlicansdnnALHLFWQDGDKVLPLERKeL  180
DSSP  llllleeeeeelllllhhhhhhhhhhhlllleeeellleeEEEEEELLEEEEEEEEEHhH


DSSP  HHHHHHHHHHHHHHHHHHhlllllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Query RANLESAARYLDGKXREIrssgkvigadrvavxaalnithdllhrkerldqessstrerv   79
ident    |                                                        
Sbjct LGQLLLDEIVTRYDEKNR..........................................  198
DSSP  HHHHHHHHHHHHHHHHHL..........................................


DSSP  hhhhhhhhhhhhl
Query relldrvdralan   92
ident              
Sbjct .............  198
DSSP  .............


No 8: 2OAUA  MOLECULE: SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL;                

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct yavnivaalaiiivgliiarmisnavnrlmisrkidatvadflsalvrygiiaftliaal   60
DSSP  lhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhllhhhhhhhhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct grvgvqtasviavlgaaglavglalqgslsnlaagvllvmfrpfrageyvdlggvagtvl  120
DSSP  hhlllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhllllllleeelllleeeee


DSSP  ......................................LEEEELLL..............
Query ......................................TLTVQILD..............    8
ident                                            |                
Sbjct svqifsttmrtadgkiivipngkiiagniinfsrepvrRNEFIIGVaydsdidqvkqilt  180
DSSP  eellleeeeeelllleeeeehhhhhhlleeellllleeEEEEEEEElllllhhhhhhhhh


DSSP  ............................LEEEELLLHHHHHHHHHHHHHHHHHHHHHHLl
Query ............................KEYCINCPDDERANLESAARYLDGKXREIRSs   40
ident                                          |                  
Sbjct niiqsedrilkdremtvrlnelgassinFVVRVWSNSGDLQNVYWDVLERIKREFDAAG.  239
DSSP  hhhhhllllllllleeeeeeellllleeEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHL.


DSSP  lllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhl
Query gkvigadrvavxaalnithdllhrkerldqessstrervrelldrvdralan   92
ident                                                     
Sbjct .....................................isfpypqmdvnfkrv  254
DSSP  .....................................lllllleeeeeeell


No 9: 2GEZA  MOLECULE: L-ASPARAGINASE ALPHA SUBUNIT;                              

DSSP  ...leeeelllleeeelLLHHHHHHHHHHHHHHHHHHHHHHLLLllLLHHHHHHHHHHHH
Query ...tltvqildkeycinCPDDERANLESAARYLDGKXREIRSSGkvIGADRVAVXAALNI   57
ident                   |   |   |   |       |            |        
Sbjct ggwsialhggagdipfsLPPERRKPREEGLRHCLQIGVEALKAQ..KPPLDVVELVVREL   58
DSSP  llleeeeeeeeelllllLLHHHHHHHHHHHHHHHHHHHHHHHLL..LLHHHHHHHHHHHH


DSSP  HHH....HHHHH................................................
Query THD....LLHRK................................................   65
ident                                                             
Sbjct ENIehfnAGIGSvltnsgtvemeasimdgntmkcgavsglstvlnpislarlvmdktphi  118
DSSP  HHLllllLLLLLllllllllleeeeeeelllleeeeeeeelllllhhhhhhhhhhhllll


DSSP  ........................HHHHHHHHHHHHHHHHhhhhhhhhhhl
Query ........................ERLDQESSSTRERVRElldrvdralan   92
ident                                                    
Sbjct ylafqgaqdfakqqgvetvdsshlITAENVERLKLAIEAN...........  158
DSSP  eeehhhhhhhhhhhllllllhhhhLLHHHHHHHHHHHHHL...........


No 10: 1JN9A  MOLECULE: PUTATIVE L-ASPARAGINASE;                                   

DSSP  ....leeeelllleeeelLLHHHHHHHHHHHHHHHHHHHHHHLLLllLLHHHHHHHHHHH
Query ....tltvqildkeycinCPDDERANLESAARYLDGKXREIRSSGkvIGADRVAVXAALN   56
ident                              |              |    |  |   |   
Sbjct gkaviaihggagaisraqMSLQQELRYIEALSAIVETGQKMLEAG..ESALDVVTEAVRL   58
DSSP  llleeeeeeeeellllllLLHHHHHHHHHHHHHHHHHHHHHHHLL..LLHHHHHHHHHHH


DSSP  HHHHH....HHHH...............................................
Query ITHDL....LHRK...............................................   65
ident                                                             
Sbjct LEEXPlfnaGIGAvftrdetheldacvmdgntlkagavagvshlrnpvlaarlvmeqsph  118
DSSP  HHHLLllllLLLLllllllllleeeeeeelllleeeeeeeelllllhhhhhhhhhhhlll


DSSP  ..........................HHHHHHHHHHHHHHhhhhhhhhhhhhl
Query ..........................ERLDQESSSTRERVrelldrvdralan   92
ident                             |  |                     
Sbjct vmmigegaenfafargmervspeifsTSLRYEQLLAARKE.............  158
DSSP  leeehhhhhhhhhhlllllllhhhhlLHHHHHHHHHHHHL.............


No 11: 1WE8A  MOLECULE: TUDOR AND KH DOMAIN CONTAINING PROTEIN;                    

DSSP  ...............LEEEELLL.....................................
Query ...............TLTVQILD.....................................    8
ident                                                             
Sbjct gssgssgiltentpvFEQLSVPQrsvgriigrggetirsickasgakitcdkesegtlll   60
DSSP  llllllllllllleeEEEEEEELllhhhhhllllhhhhhhhhhhlleeeellllllllll


DSSP  .LEEEELLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLlhhhhhhhhhhhhhhhhhhhhhh
Query .KEYCINCPDDERANLESAARYLDGKXREIRSSGKVIgadrvavxaalnithdllhrker   67
ident      |     | |              | |                             
Sbjct sRLIKISGTQKEVAAAKHLILEKVSEDEELRKRIAHS.......................   97
DSSP  eEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHLL.......................


DSSP  hhhhhhhhhhhhhhhhhhhhhhhhl
Query ldqessstrervrelldrvdralan   92
ident                          
Sbjct ..................asgpssg  104
DSSP  ..................lllllll


No 12: 2BA0A  MOLECULE: ARCHEAL EXOSOME RNA BINDING PROTEIN RRP4;                  

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct rkivlpgdllstnpraagygtyveggkvyakiiglfdqtethvrviplkgrytpsvgdvv   60
DSSP  lleelllleeellllllllleeeelleeeellleeeeelllleeeeelllllllllllee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct igiirevaangwavdiyspyqaflpvsenpemkpnkkpnevldigdaiiakvlnidpkmk  120
DSSP  eeeeeeellleeeeelllllleeeehhhlllllllllhhhlllllleeeeeeeeelllll


DSSP  ...............LEEEELLL..............................LEEEELL
Query ...............TLTVQILD..............................KEYCINC   15
ident                   | |                                     | 
Sbjct vtltmkdricrpirfGRIVAINParvprvigkkgsmikllkseldvqivvgqnGLIWVNG  180
DSSP  eeeelllllleeellLEEEELLHhhhhhhhlhhhhhhhhhhhhhlleeeelllLEEEEEL


DSSP  LHHHHHHHHHHHHHHHHHhhHHHLllllllhhhhhhHHHHHHHHHHHHHhhhhhhhhhhh
Query PDDERANLESAARYLDGKxrEIRSsgkvigadrvavXAALNITHDLLHRkerldqessst   75
ident         | |                                     |           
Sbjct DRRKVSIAEEAIYLIEQE..AHTE............GLTDRVAEFIKRR...........  215
DSSP  LHHHHHHHHHHHHHHHHL..LLLL............LHHHHHHHHHHHH...........


DSSP  hhhhhhhhhhhhhhhhl
Query rervrelldrvdralan   92
ident                  
Sbjct ..............kad  218
DSSP  ..............hhl


No 13: 1MKMA  MOLECULE: ICLR TRANSCRIPTIONAL REGULATOR;                            

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct mntlkkafeildfivknpgdvsvseiaekfnmsvsnaykymvvleekgfvlrkkdkryvp   60
DSSP  lllhhhhhhhhhhhhhllllllhhhhhhhllllhhhhhhhhhhhhhllleeellllleee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct gyklieygsfvlrrfnirdiahdhlvdimkrtgetvhlilkdgfegvyidkvegeqsipm  120
DSSP  llhhhhhhhhhhhhllhhhhhhhhhhhhhhllllleeeeeellleeeeeeeellllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct vsrlgmkvdlystasgksilafvpekelkeylkivelkpktpntitnprvlkrelekirk  180
DSSP  lllllleeellllhhhhhhhhhllhhhhhhhhhhlllllllllllllhhhhhhhhhhhhh


DSSP  ..............LEEEELL.......LLEEEEL.....LLHHHHHHHHHHHHHHHHHH
Query ..............TLTVQIL.......DKEYCIN.....CPDDERANLESAARYLDGKX   34
ident                                  |                          
Sbjct rgyavdneeneigiMCVGVPIfdhngypVAGVSISgvarkFTEEKIEEYSDVLKEKAEEI  240
DSSP  hlleeeelllllleEEEEEEEellllleEEEEEEEeehhhLLHHHHHHHHHHHHHHHHHH


DSSP  HHHHLllllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhl
Query REIRSsgkvigadrvavxaalnithdllhrkerldqessstrervrelldrvdralan   92
ident                                                           
Sbjct SRKLG....................................................y  246
DSSP  HHHLL....................................................l


No 14: 2Q3QA  MOLECULE: UNCHARACTERIZED PROTEIN AT1G24000;                         

DSSP  .......LEEEELL..............................................
Query .......TLTVQIL..............................................    7
ident                                                             
Sbjct stlkgalSVKFDVKcpadkffsafvedtnrpfekngkteieavdlvkktxtiqxsgseiq   60
DSSP  llleellEEEEEELllhhhhhhhhhhhllllllllleeeeeeeelllleeeeeeelllhh


DSSP  ...................LLEEEELL...........LHHHHHHHHHHHHHHHHHHHHH
Query ...................DKEYCINC...........PDDERANLESAARYLDGKXREI   37
ident                                       |             ||      
Sbjct kyfktlkgsiavtpigvgdGSHVVWTFhfekvhkdiddPHSIIDESVKYFKKLDEAILNF  120
DSSP  hleeeeeeeeeeeelllllLEEEEEELleeelllllllLHHHHHHHHHHHHHHHHHHHLL


DSSP  hlllllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhl
Query rssgkvigadrvavxaalnithdllhrkerldqessstrervrelldrvdralan   92
ident                                                        
Sbjct .......................................................  120
DSSP  .......................................................


No 15: 2FH5A  MOLECULE: SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA                 

DSSP  ...............................................LEEEE....llLL
Query ...............................................TLTVQ....ilDK    9
ident                                                ||           
Sbjct hsmvdfftifskgglvlwcfqgvsdsctgpvnalirsvllqethealTLKYKldnqfeLV   60
DSSP  llllleeeeeelllleeeeelllllllllhhhhhhhhlhhhllllllEEEEEeellllEE


DSSP  EEEELLLHHHHHHHHHHHHHHHHHHHHHHLLL.........llLLHHhhhhhHHHHHHHH
Query EYCINCPDDERANLESAARYLDGKXREIRSSG.........kvIGADrvavxAALNITHD   60
ident                          |                    |             
Sbjct FVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEiqqqsalsllnGTFD.....FQNDFLRL  115
DSSP  EEEEELLHHHHHHHHHHHHHHHHHHHHHLHHHhhllllhhhhlLLLL.....LHHHHHHH


DSSP  HHhhhhhhhhhhhhhhhhhhhhhhhhhhhhhl
Query LLhrkerldqessstrervrelldrvdralan   92
ident |                               
Sbjct LR.......................eaeessk  124
DSSP  HH.......................hhhhhll


No 16: 2DMWA  MOLECULE: SYNAPTOBREVIN-LIKE 1 VARIANT;                              

DSSP  .........................................................LEE
Query .........................................................TLT    3
ident                                                             
Sbjct gssgssgmailfavvargttilakhawcggnflevteqilakipsennkltyshgnyLFH   60
DSSP  llllllllllleeeeeelleeeeeeellllllhhhhhhhhlllllllleeeeeelleEEE


DSSP  EE..llLLEEeELLLHHHHHHHHHHHHHHHHHHH.HHHLL.LLLLLHHHhHHHHHHHHHH
Query VQ..ilDKEYcINCPDDERANLESAARYLDGKXR.EIRSS.GKVIGADRvAVXAALNITH   59
ident            |   | ||                   |                     
Sbjct YIcqdrIVYLcITDDDFERSRAFNFLNEIKKRFQtTYGSRaQTAPPYAM.NSEFSSVLAA  119
DSSP  EEeellEEEEeEEELLLLHHHHHHHHHHHHHHHHhHLHHHhHLLLLLLL.HHHHHHHHHH


DSSP  HHHH..HHHHHHhhhhhhhhhhhhhhhhhhhhhhl
Query DLLH..RKERLDqessstrervrelldrvdralan   92
ident  | |                               
Sbjct QLKHhsSGPSSG.......................  131
DSSP  HHHHhlLLLLLL.......................


No 17: 2O66A  MOLECULE: PII PROTEIN;                                               

DSSP  ...........LEEEELLL..................................LEEEELL
Query ...........TLTVQILD..................................KEYCINC   15
ident                                                          |  
Sbjct ssdyipdskfyKVEAIVRPwriqqvssallkigirgvtvsdvrgfgedkfvakVKMEIVV   60
DSSP  llllllllleeEEEEEELHhhhhhhhhhhhhlllllleeeeeeelllllleeeEEEEEEE


DSSP  LHHHHHHHHHHHHHHHHhhHHHHlllllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Query PDDERANLESAARYLDGkxREIRssgkvigadrvavxaalnithdllhrkerldqessst   75
ident   |                                                         
Sbjct KKDQVESVINTIIEGAR..TGEI............................gdgkifvlp   90
DSSP  EHHHHHHHHHHHHHHHL..LLLL............................llleeeeee


DSSP  hhhhhhhhhhhhhhhhl
Query rervrelldrvdralan   92
ident                  
Sbjct vsdvirvrtgergekae  107
DSSP  eleeeellllllhhhll


No 18: 1BB8A  MOLECULE: INTEGRASE;                                                 

DSSP  .......................LEEEELLL.LEEEELLLHH..............HHHH
Query .......................TLTVQILD.KEYCINCPDD..............ERAN   22
ident                                                             
Sbjct ekrrdnrgrilktgesqrkdgryLYKYIDSFgEPQFVYSWKLvatdrvpagkrdciSLRE   60
DSSP  llllllllllllllleellllleEEEEELLLlLEEEEEELLLllllllllllllllLHHH


DSSP  HHHHHHHHHHHhhhhhlllllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Query LESAARYLDGKxreirssgkvigadrvavxaalnithdllhrkerldqessstrervrel   82
ident                                                             
Sbjct KIAELQKDIHD.................................................   71
DSSP  HHHHHHHHLLL.................................................


DSSP  hhhhhhhhhl
Query ldrvdralan   92
ident           
Sbjct ..........   71
DSSP  ..........


No 19: 2HN1A  MOLECULE: MAGNESIUM AND COBALT TRANSPORTER;                          

DSSP  ............LEEEELL......LLEE....................EELL.......
Query ............TLTVQIL......DKEY....................CINC.......   15
ident               |  |        ||                                
Sbjct pvftgekkveetKITAAIYdeksveFKELevgelesvvrsalalnkklwIDVVgvhdesl   60
DSSP  llllllllllllLLEEEEEllllllEELLlllllhhhhlllllllleeeEEELllllhhh


DSSP  ............................................................
Query ............................................................   15
ident                                                             
Sbjct iakiceflgihplaaedilntaqrvkiedyddhlflvlkillynetleidqlslvlkknl  120
DSSP  hhhhhhlllllhhhhhhhhlllllleeeellleeeeeeeeeeellleeeeeeeeeeelle


DSSP  ....LHHHhHHHHHHHHHH..hHHHHHHhlllllllhhhHHHHHHHHHHHHHHHHHHHHH
Query ....PDDErANLESAARYL..dGKXREIrssgkvigadrVAVXAALNITHDLLHRKERLD   69
ident        |   | |    |   |  |                  |  |            
Sbjct vatfEEREyWILDSIRSRLksgGRMRKL...........AGDYLAYTILDAVVDSYFEAL  169
DSSP  eeeeELLLlLLLHHHHHHHhllLHHHHL...........LHHHHHHHHHHHHHHHHHHHH


DSSP  HHHHHHHHHHHHHHHHHHHHH.......................................
Query QESSSTRERVRELLDRVDRAL.......................................   90
ident    |   |         |  |                                       
Sbjct LKISDEIEVLEDEVVSGDSTLigkihslkreilafrnavwplrdvlsfftrveheligee  229
DSSP  HHHHHHHHHHHHHHHLLLLLLllhhhhhhhhhhhhhhhhllhhhhhhhhhhlllllllll


DSSP  ...............hl
Query ...............an   92
ident                  
Sbjct vkvyyrdvydhavrlme  246
DSSP  lhhhhhhhhhhhhhhll


No 20: 1YK0A  MOLECULE: ATRIAL NATRIURETIC PEPTIDE CLEARANCE RECEPTOR;             

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct alppqkievlvllpqddsylfsltrvrpaieyalrsvegllppgtrfqvayedsdcgnra   60
DSSP  llllleeeeeeeelllllllllhhhhhhhhhhhhhhhlllllllleeeeeeeelllllhh


DSSP  .........leeeellLLEEEEL.....................................
Query .........tltvqilDKEYCIN.....................................   14
ident                 |                                           
Sbjct lfslvdrvaaargakpDLILGPVceyaaapvarlashwdlpmlsagalaagfqhkdseys  120
DSSP  hhhhhhhhhhllllllLEEELLLlhhhhhhhhhhhhhlllleeelllllhhhhlllllll


DSSP  ............................................................
Query ............................................................   14
ident                                                             
Sbjct hltrvapayakmgemmlalfrhhhwsraalvysddklerncyftlegvhevfqeeglhts  180
DSSP  leeellllhhhhhhhhhhhhhhhllleeeeeeellllllhhhhhhhhhhhhhhhhlleee


DSSP  ............................................................
Query ............................................................   14
ident                                                             
Sbjct iysfdetkdldledivrniqaservvimcassdtirsimlvahrhgmtsgdyaffnielf  240
DSSP  eeeelllllllhhhhhhhhhhllleeeeellhhhhhhhhhhhhllllllllleeeeelll


DSSP  ...........................................................l
Query ...........................................................c   15
ident                                                             
Sbjct nsssygdgswkrgdkhdfeakqaysslqtvtllrtvkpefekfsmevkssvekqglnmed  300
DSSP  llllllllllllllllhhhhhhhhhheeeeeelllllhhhhhhhhhhhhhhhllllllll


DSSP  lHHHHHHHHHHHHHHHHHHHHHHLLLLL..lLHHHHHHHHHHHH............hhhH
Query pDDERANLESAARYLDGKXREIRSSGKV..iGADRVAVXAALNI............thdL   61
ident            |  |                                             
Sbjct yVNMFVEGFHDAILLYVLALHEVLRAGYskkDGGKIIQQTWNRTfegiagqvsidangdR  360
DSSP  lLLHHHHHHHHHHHHHHHHHHHHHLLLLlllLHHHHHHHHLLEEeelllleeeelllllL


DSSP  HHH.....................HHHHHHhhhHHHHhhhhhhhhhhhhhhl
Query LHR.....................KERLDQessSTRErvrelldrvdralan   92
ident                                    |                
Sbjct YGDfsviamtdveagtqevigdyfGKEGRF...EMRP...............  394
DSSP  LLEeeeeeeeelllleeeeeeeeeLLLLEE...EELL...............


No 21: 1Q8KA  MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 2                 

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct mscrfyqhkfpevedvvmvnvrsiqemgayvslleynniegmihlselsrrrirsinkli   60
DSSP  llllllllllllllleeeeeeeeeelleeeeelllllllleeelhhhlllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct rigrnecvkvirvdkekgyidlskrrvspeeaikcedkftksktvysilrhvaevleytk  120
DSSP  lllleeeeeeeeeelllleeeeelllllhhhhhhhhhhhhhhhhhhhhhhhhhhhlllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct deqleslfqrtawvfddkykrpgygaydafkhavsdpsildsldlnederevlinninrr  180
DSSP  lhhhhhhhhhlhhhhhhhlllllhhhhhhhhhllllhhhhhhllllhhhhhhhhhhhhhh


DSSP  ......LEEEELL.....................................lLEEEELLLh
Query ......TLTVQIL.....................................dKEYCINCPd   17
ident            |                                                
Sbjct ltpqavKIRADIEvacygyegidavkealraglncstenmpikinliapprYVMTTTTL.  239
DSSP  llllllEEEELLLeellllllhhhhhhhhhhhhhllllllleeeeeeelleEEEEEELL.


DSSP  hHHHHHHHHHHHHHHHHHHHHLLLLLllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Query dERANLESAARYLDGKXREIRSSGKVigadrvavxaalnithdllhrkerldqessstre   77
ident  ||    |          |                                         
Sbjct .ERTEGLSVLSQAMAVIKEKIEEKRG.............vfnvqmepkvvtdtdetelar  285
DSSP  .LHHHHHHHHHHHHHHHHHHHHLLLL.............eelllllleellllhhhhhhh


DSSP  hhhhhhhhhhhhhhl
Query rvrelldrvdralan   92
ident                
Sbjct qmerlerenaevdgd  300
DSSP  hlllhhhllllllll


No 22: 1J8BA  MOLECULE: YBAB;                                                      

DSSP  .....................................leeeellllEEEEL.........
Query .....................................tltvqildkEYCIN.........   14
ident                                                             
Sbjct lgglxkqaqqxqekxqkxqeeiaqlevtgesgaglvkitingahncRRIDIdpslxeddk   60
DSSP  lllhhhhhhhhhhhhhhhhhhhllleeeeeehhhleeeeeelllleEEEEElhhhhhllh


DSSP  .lLHHHHHHHHHHHHHHHHHHHHHHLLLLLLlhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Query .cPDDERANLESAARYLDGKXREIRSSGKVIgadrvavxaalnithdllhrkerldqess   73
ident     |  |     |                                              
Sbjct exLEDLIAAAFNDAVRRAEELQKEKXASVTA.............................   91
DSSP  hhHHHHHHHHHHHHHHHHHHHHHHHHHHHLL.............................


DSSP  hhhhhhhhhhhhhhhhhhl
Query strervrelldrvdralan   92
ident                    
Sbjct ..................g   92
DSSP  ..................l


No 23: 1EC6A  MOLECULE: RNA-BINDING PROTEIN NOVA-2;                                

DSSP  .....LEEEE...................................lllLEEEELL.....
Query .....TLTVQ...................................ildKEYCINC.....   15
ident         |                                                   
Sbjct mkelvEIAVPenlvgailgkggktlveyqeltgariqiskkgeflpgtRNRRVTItgspa   60
DSSP  llleeEEEEEhhhhhhhhlhhhhhhhhhhhhhlleeeellllllllllLEEEEEEellhh


DSSP  .LHHHHHHHHHHHHHHHHHHHHHhLLLLlllhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Query .PDDERANLESAARYLDGKXREIrSSGKvigadrvavxaalnithdllhrkerldqesss   74
ident               |  |                                          
Sbjct aTQAAQYLISQRVTYEQGVRASN.PQKV................................   87
DSSP  hHHHHHHHHHHHHHHHHHHHHHL.LLLL................................


DSSP  hhhhhhhhhhhhhhhhhl
Query trervrelldrvdralan   92
ident                   
Sbjct ..................   87
DSSP  ..................