DaliLite: Structural Neighbours

Query: 1RH7F MOLECULE: RESISTIN-LIKE BETA;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1RH7-A 13.5  1.0   81    81  100   RESISTIN-LIKE BETA;                                        "         
   2:  1RGX-A 12.8  2.8   81    89   40   RESISTIN;                                                  "         
   3:  1Z1W-A  3.5  3.0   54   780    7   TRICORN PROTEASE INTERACTING FACTOR F3;                    "         
   4:  1ZHQ-A  2.7  2.3   39   113    5   MANNAN-BINDING LECTIN;                                     "         
   5:  2P4E-A  2.4  7.3   67   494    7   PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             "         
-

No 1: 1RH7A  MOLECULE: RESISTIN-LIKE BETA;                                        

DSSP  LLLHHHHHHHHHHHHHHLLLLLEEEEEEEEELLEEELLLLLEEEEEEELLLLLLEEELLL
Query CSFESLVDQRIKEALSRQEPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSWDIRNG   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct CSFESLVDQRIKEALSRQEPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSWDIRNG   60
DSSP  LLLLHHHHHHHLLLLLLLLLLLEEEEEEEEELLEEELLLLLEEEEEEEHHHLLLEEEELL


DSSP  LEEEELLLLLLEEEEEEEEEL
Query NTCHCQCSVMDWASARCCRMA   81
ident |||||||||||||||||||||
Sbjct NTCHCQCSVMDWASARCCRMA   81
DSSP  LEEEELLLLLLEEEEEEEEEL


No 2: 1RGXA  MOLECULE: RESISTIN;                                                  

DSSP  ..LLLHHHHHHHHHHHHHHL...LLLLEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE
Query ..CSFESLVDQRIKEALSRQ...EPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSW   55
ident                              |  | | | ||||| |  |  | ||  ||||
Sbjct cpIDEAIDKKIKQDFNSLFPnaiKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
DSSP  llHHHHHHHHHHHHHHHHHHhhhLLEEEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE


DSSP  EELLLLEEEELLLLLLEEEEEEEEEL...
Query DIRNGNTCHCQCSVMDWASARCCRMA...   81
ident |||    |||||   ||  ||||      
Sbjct DIREEKVCHCQCARIDWTAARCCKLQvas   89
DSSP  EEELLLEEEELLLLLLEEEEEEEEEEell


No 3: 1Z1WA  MOLECULE: TRICORN PROTEASE INTERACTING FACTOR F3;                    

DSSP  lllhhhhhhhhhhhhhhllLLLEEEEEEEEEL...leeELLLLLEEEEEEELllLLLEEE
Query csfeslvdqrikealsrqePKTISCTSVTSSG...rlaSCPAGMVVTGCACGygCGSWDI   57
ident                     |       |             |                 
Sbjct .....mevekydltldfdiQKRTFNGTETITAdagdivLDAVGLQINWMKVN..GRDTAF   53
DSSP  .....lleeeeeeeeeeelLLLEEEEEEEEEElleeeeEELLLLEEEEEEEL..LLEELL


DSSP  LLL..leeEELLLLLLEEEEEEEEEL..................................
Query RNG..ntcHCQCSVMDWASARCCRMA..................................   81
ident             |                                               
Sbjct TYDgqtvrAPGDSQPQKIEISFAGKVsdslsgiyyagrengmitthfeatdarrmfpcvd  113
DSSP  EELlleeeEEEELLLLEEEEEEEEELllllleeeeellllleeeeelllllhhhllllll


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct hpaykavfaitvvidkdydaisnmppkrievserkvvefqdtprmstyllyvgigkfrye  173
DSSP  lllllleeeeeeeelllleeeellleeeeeellleeeeelllllllhhhlleeeelleee


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct yekyrdidlilaslkdirskypldmarksvefyenyfgipyalpkmhlisvpefgagame  233
DSSP  eeeelleeeeeeelllllllhhhhhhhhhhhhhhhhhllllllleeeeeeelllllleel


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct nwgaitfreiymdiaensavtvkrnsanviaheiahqwfgdlvtmkwwndlwlnesfatf  293
DSSP  llleeeeehhhhlllllllhhhhhhhhhhhhhhhhhlllllleellllllhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct msyktmdtlfpewsfwgdffvsrtsgalrsdslknthpievdvrdpdeisqifdeisygk  353
DSSP  hhhhhhhhhlhhhlhhhhhhhhlhhhhhhhllllllllllllllllllllllllllllhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct gasilrmiedyagyeefrkgiskylndhkfgnaegsdlwtaiedvsgkpvkrvmeywikn  413
DSSP  hhhhhhhhhhhhlhhhhhhhhhhhhhhllleellhhhhhhhhhhhhlllhhhhhhhhhhl


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct pgypviklkrngrkitmyqtrfllngeeegrwpvpvnikkkdgverilledeasieadgl  473
DSSP  llleeeeeeellleeeeeeeeelllleeelllleeeeeelllleeeeeellleeeellll


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct ikinadsagfyrvlyddatfsdvmghyrdlspldriglvddlfafllsghidpetyrqri  533
DSSP  leelhhhlllleeeelhhhhhhhhhlhhhllhhhhhhhhhhhhhhhhhllllhhhhhhhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct rnffddedhnvitaivgqmeylrmlthafdddarafcrsrmqfltgkqdenlkialgrvs  593
DSSP  hlllllllhhhhhhhhhhhhhhlllllllhhhhhhhhhhhhhhhlllllhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct rlyvmvdesyaeemsklfkdfdsaepemrssiatayalvtgdlkgllekfrsvdrdedrv  653
DSSP  hhhhhhlhhhhhhhhhhhhhlllllhhhhhhhhhhhhhhlllhhhhhhhhhlllllhhhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct riisafgklksntdlstvygmvekteikkqdmisffssaletlpgrefifanldriirlv  713
DSSP  hhhhhhhhllllllllllllllllllllhhhlhhhhhhhlllhhhhhhhhhhhhhlhhhh


DSSP  ............................................................
Query ............................................................   81
ident                                                             
Sbjct iryftgnrtasrtvemmipvigldhpdaedivrnigsknismglakgiemlavnrklver  773
DSSP  hhhlllllhhhhhhhhhhhhhllllllhhhhhhllllllhhhhhhhhhhhhhhhhhhhhh


DSSP  .......
Query .......   81
ident        
Sbjct irqtavk  780
DSSP  hllllll


No 4: 1ZHQA  MOLECULE: MANNAN-BINDING LECTIN;                                     

DSSP  lllhhhhhhhhhhhhhhllllLEEEEEEEEELL..........eeELLL.LLEEE.EEEE
Query csfeslvdqrikealsrqepkTISCTSVTSSGR..........laSCPA.GMVVT.GCAC   48
ident                                                 |     |     
Sbjct .....................ASYKVNIPAGPLwsnaeaqqvgpkIAAAhQGNFTgQWTT   39
DSSP  .....................LEEEEEEEEELLllhhhhhhhhhhHHHHlLLEEEeEEEE


DSSP  LLlllleeelllleeeellllLLEEEEEEEEEL...........................
Query GYgcgswdirngntchcqcsvMDWASARCCRMA...........................   81
ident                                                             
Sbjct VV..................eSAMSVVEVELQVentgihefktdvlagplwsndeaqklg   81
DSSP  EE..................lLLEEEEEEEEELlllllleeeeeeeeellllhhhhhhhh


DSSP  ................................
Query ................................   81
ident                                 
Sbjct pqiaasygaeftgqwrtivegvmsviqikytf  113
DSSP  hhhhhlllleeeeeeeeeellleeeeeeeeel


No 5: 2P4EA  MOLECULE: PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             

DSSP  ...............lLLHHH.......................................
Query ...............cSFESL.......................................    6
ident                                                             
Sbjct sipwnleritppryraGGSLVevylldtsiqsdhreiegrvmvtdfenvpeedqaskcds   60
DSSP  lllhhhhhllllllllLLLLLeeeeeellllllllllllleeeeeeelllllllhhhhlh


DSSP  ............................................................
Query ............................................................    6
ident                                                             
Sbjct hgthlagvvsgrdagvakgasmrslrvlncqgkgtvsgtliglefirksqlvqpvgplvv  120
DSSP  hhhhhhhhhhlllllllllleeeeeelllllleeehhhhhhhhhhhhhhhhhllllleee


DSSP  ............................................................
Query ............................................................    6
ident                                                             
Sbjct llplaggysrvlnaacqrlaragvvlvtaagnfrddaclyspasapevitvgatnaqdqp  180
DSSP  eeleeeellhhhhhhhhhhhhllleeeeelllllllhhheellllllleeeeeellllll


DSSP  .....................................................hhhhHHH
Query .....................................................vdqrIKE   13
ident                                                            |
Sbjct vtlgtlgtnfgrcvdlfapgediigassdcstcfvsqsgtsqaaahvagiaammlsaEPE  240
DSSP  leelleelllllllleeeellleeeellllllleeeellhhhhhhhhhhhhhhhhhhLLL


DSSP  H...........................................................
Query A...........................................................   14
ident                                                             
Sbjct Ltlaelrqrlihfsakdvineawfpedqrvltpnlvaalppsthwqlfcrtvwsahsgpt  300
DSSP  Llhhhhhhhhhhhleellllhhhllhhhlllllleellllllllllleeeeeelllllll


DSSP  ............................................................
Query ............................................................   14
ident                                                             
Sbjct rmataiarcapdeellscssfsrsgkrrgermeaqggklvcrahnafggegvyaiarccl  360
DSSP  llleeeelllllleeeeeeeellllleeeeeeeelllleeeeeeellllllleeeeeeee


DSSP  ..........................................................hh
Query ..........................................................ls   16
ident                                                             
Sbjct lpqancsvhtappaeasmgtrvhchqqghvltgcsshwevedlgpnqcvghreasihasc  420
DSSP  lllleeeeeeelllllllleeeellllleeeeeeeeellllllllleeeelllleeeeee


DSSP  hllLLLEEEEEEEEE....lLEEELLL..LLEEEEEEE.LLLLLLEEELLL.LEEEELLl
Query rqePKTISCTSVTSS....gRLASCPA..GMVVTGCAC.GYGCGSWDIRNG.NTCHCQCs   68
ident    |                                |  |                    
Sbjct chaPGLECKVKEHGIpapqeQVTVACEegWTLTGCSALpGTSHVLGAYAVDnTCVVRSRs  480
DSSP  eelLLEEEEEEEEEEellllEEEEELLllLEEEEEEELlLLLLEEEEEEELlEEEEEELl


DSSP  llLEEEEEEEEEL.
Query vmDWASARCCRMA.   81
ident          |    
Sbjct eeAVTAVAICCRSr  494
DSSP  llEEEEEEEEEEEl