DaliLite: Structural Neighbours

Query: 1RH7D MOLECULE: RESISTIN-LIKE BETA;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1RH7-A 13.1  0.8   81    81  100   RESISTIN-LIKE BETA;                                        "         
   2:  1RGX-A 12.5  2.6   78    89   42   RESISTIN;                                                  "         
   3:  2P4E-A  7.4 10.1   72   494   17   PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             "         
   4:  1ZHQ-A  2.9  2.2   39   113    5   MANNAN-BINDING LECTIN;                                     "         
   5:  2CZ8-A  2.6  2.6   45    67    9   TT0972 PROTEIN;                                            "         
   6:  1XRS-B  2.4  2.1   37   212    8   D-LYSINE 5,6-AMINOMUTASE ALPHA SUBUNIT;                    "         
   7:  1VE0-A  2.0  2.5   47   134    6   HYPOTHETICAL PROTEIN (ST2072);                             "         
   8:  1A34-A  2.0  5.6   65   147    6   PROTEIN (SATELLITE TOBACCO MOSAIC VIRUS);                  "         
-

No 1: 1RH7A  MOLECULE: RESISTIN-LIKE BETA;                                        

DSSP  LLHHHHHHHHLLLLLLLLLLLLEEEEEELLLLLEEELLLLLEEEEEEELLLLLLEEEELL
Query CSFESLVDQRIKEALSRQEPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSWDIRNG   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct CSFESLVDQRIKEALSRQEPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSWDIRNG   60
DSSP  LLLLHHHHHHHLLLLLLLLLLLEEEEEEEEELLEEELLLLLEEEEEEEHHHLLLEEEELL


DSSP  LEEEELLLLLLLEEEEEEEEL
Query NTCHCQCSVMDWASARCCRMA   81
ident |||||||||||||||||||||
Sbjct NTCHCQCSVMDWASARCCRMA   81
DSSP  LEEEELLLLLLEEEEEEEEEL


No 2: 1RGXA  MOLECULE: RESISTIN;                                                  

DSSP  ...llhHHHHHHHLLLLLLLL..LLLLEEEEEELLLLLEEELLLLLEEEEEEELLLLLLE
Query ...csfESLVDQRIKEALSRQ..EPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSW   55
ident                  |           |  | | | ||||| |  |  | ||  ||||
Sbjct cpideaIDKKIKQDFNSLFPNaiKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
DSSP  llhhhhHHHHHHHHHHHHHHHhhLLEEEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE


DSSP  EEELLLEEEELLLLLLLEEEEEEEEL...
Query DIRNGNTCHCQCSVMDWASARCCRMA...   81
ident |||    |||||   ||  ||||      
Sbjct DIREEKVCHCQCARIDWTAARCCKLQvas   89
DSSP  EEELLLEEEELLLLLLEEEEEEEEEEell


No 3: 2P4EA  MOLECULE: PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             

DSSP  LLHHhhhhhhLLLLL.............................................
Query CSFEslvdqrIKEAL.............................................   15
ident                                                             
Sbjct SIPW.nleriTPPRYraggslvevylldtsiqsdhreiegrvmvtdfenvpeedqaskcd   59
DSSP  LLLH.hhhhlLLLLLllllllleeeeeellllllllllllleeeeeeelllllllhhhhl


DSSP  ............................................................
Query ............................................................   15
ident                                                             
Sbjct shgthlagvvsgrdagvakgasmrslrvlncqgkgtvsgtliglefirksqlvqpvgplv  119
DSSP  hhhhhhhhhhhlllllllllleeeeeelllllleeehhhhhhhhhhhhhhhhhlllllee


DSSP  ............................................................
Query ............................................................   15
ident                                                             
Sbjct vllplaggysrvlnaacqrlaragvvlvtaagnfrddaclyspasapevitvgatnaqdq  179
DSSP  eeeleeeellhhhhhhhhhhhhllleeeeelllllllhhheellllllleeeeeelllll


DSSP  ............................................................
Query ............................................................   15
ident                                                             
Sbjct pvtlgtlgtnfgrcvdlfapgediigassdcstcfvsqsgtsqaaahvagiaammlsaep  239
DSSP  lleelleelllllllleeeellleeeellllllleeeellhhhhhhhhhhhhhhhhhhll


DSSP  .........................................LLLLlLLEEEEEELLLL..
Query .........................................SRQEpKTISCTSVTSSG..   32
ident                                                   |  | |    
Sbjct eltlaelrqrlihfsakdvineawfpedqrvltpnlvaalpPSTH.WQLFCRTVWSAHsg  298
DSSP  lllhhhhhhhhhhhleellllhhhllhhhlllllleellllLLLL.LLLEEEEEELLLll


DSSP  ......LEEELLLLLEEEEEEELL...lLLLEEEEL...LLEEEELLL...LLLLEEEEE
Query ......RLASCPAGMVVTGCACGY...gCGSWDIRN...GNTCHCQCS...VMDWASARC   77
ident         | |        |                      |            | |||
Sbjct ptrmatAIARCAPDEELLSCSSFSrsgkRRGERMEAqggKLVCRAHNAfggEGVYAIARC  358
DSSP  llllleEEELLLLLLEEEEEEEELllllEEEEEEEElllLEEEEEEELlllLLLEEEEEE


DSSP  EEE.........................................................
Query CRM.........................................................   80
ident |                                                           
Sbjct CLLpqancsvhtappaeasmgtrvhchqqghvltgcsshwevedlgpnqcvghreasiha  418
DSSP  EELllleeeeeeelllllllleeeellllleeeeeeeeellllllllleeeelllleeee


DSSP  ............................................................
Query ............................................................   80
ident                                                             
Sbjct scchapgleckvkehgipapqeqvtvaceegwtltgcsalpgtshvlgayavdntcvvrs  478
DSSP  eeeellleeeeeeeeeeelllleeeeellllleeeeeeelllllleeeeeeelleeeeee


DSSP  ...............l
Query ...............a   81
ident                 
Sbjct rseeavtavaiccrsr  494
DSSP  lllleeeeeeeeeeel


No 4: 1ZHQA  MOLECULE: MANNAN-BINDING LECTIN;                                     

DSSP  llhhhhhhhhlllllllllllLEEEEEELLLLL..........eeELLL.LLEEE.EEEE
Query csfeslvdqrikealsrqepkTISCTSVTSSGR..........laSCPA.GMVVT.GCAC   48
ident                                                 |     |     
Sbjct .....................ASYKVNIPAGPLwsnaeaqqvgpkIAAAhQGNFTgQWTT   39
DSSP  .....................LEEEEEEEEELLllhhhhhhhhhhHHHHlLLEEEeEEEE


DSSP  LllllleeeellleeeelllLLLLEEEEEEEEL...........................
Query GygcgswdirngntchcqcsVMDWASARCCRMA...........................   81
ident                                                             
Sbjct V..................vESAMSVVEVELQVentgihefktdvlagplwsndeaqklg   81
DSSP  E..................eLLLEEEEEEEEELlllllleeeeeeeeellllhhhhhhhh


DSSP  ................................
Query ................................   81
ident                                 
Sbjct pqiaasygaeftgqwrtivegvmsviqikytf  113
DSSP  hhhhhlllleeeeeeeeeellleeeeeeeeel


No 5: 2CZ8A  MOLECULE: TT0972 PROTEIN;                                            

DSSP  llhhhhhhhhlllllllLLLLLEEEEEELLLLL..EEEL............llLLEEEEE
Query csfeslvdqrikealsrQEPKTISCTSVTSSGR..LASC............paGMVVTGC   46
ident                             ||      |                   |   
Sbjct .................GKVYKKVELVGTSEEGleAAIQaalararktlrhldWFEVKEI   43
DSSP  .................LLEEEEEEEEEEELLLhhHHHHhhhhhhhhhllleeEEEEEEE


DSSP  EELLlllleeeellleeeellLLLLLEEEEEEEEL....
Query ACGYgcgswdirngntchcqcSVMDWASARCCRMA....   81
ident                                        
Sbjct RGTI...............geAGVKEYQVVLEVGFrlee   67
DSSP  EEEE...............elLEEEEEEEEEEEEEelll


No 6: 1XRSB  MOLECULE: D-LYSINE 5,6-AMINOMUTASE ALPHA SUBUNIT;                    

DSSP  llhhhhhhhhllllllllllllEEEEEELLLLLE......eELLL.......LLEEEEEE
Query csfeslvdqrikealsrqepktISCTSVTSSGRL......aSCPA.......GMVVTGCA   47
ident                           | |                          |    
Sbjct ......................KVQLSFTLPLKNnersaeaAKQIalkmgleEPSVVMQQ   38
DSSP  ......................LEEEEEEELLLLlhhhhhhHHHHhhlllllLLEEEEEE


DSSP  ELllllleeeellleeeellllLLLEEEEEEEE...........................
Query CGygcgswdirngntchcqcsvMDWASARCCRM...........................   80
ident                                                             
Sbjct SL...................dEEFTFFVVYGNeilsmeetdeyikenigrkivvvgast   79
DSSP  EE...................eLLEEEEEEEELllllhhhhhhhhhhhlllleeeeeeel


DSSP  ............................................................
Query ............................................................   80
ident                                                             
Sbjct gtdahtvgidaimnmkgyaghygleryemidaynlgsqvanedfikkaveleadvllvsq  139
DSSP  llllllhhhhhhhllllllllllhhhllleeeeellllllhhhhhhhhhhlllleeeeel


DSSP  ............................................................
Query ............................................................   80
ident                                                             
Sbjct tvtqknvhiqnmthlielleaeglrdrfvllcggprinneiakelgydagfgpgrfaddv  199
DSSP  llllllhhhhhhhhhhhhhhhlllhhhleeeeelllllhhhhhllllleeelllllhhhh


DSSP  ............l
Query ............a   81
ident              
Sbjct atfavktlndrmn  212
DSSP  hhhhhhhhhhhhl


No 7: 1VE0A  MOLECULE: HYPOTHETICAL PROTEIN (ST2072);                             

DSSP  llhhhhhhhhllllllllllLLEEEEEELLLL.......leeelLLLL........eeEE
Query csfeslvdqrikealsrqepKTISCTSVTSSG.......rlascPAGM........vvTG   45
ident                       |     |                               
Sbjct ....................XKIISKEFTVKTrsrfdsiditeqVSEAikginngiahVI   40
DSSP  ....................LEEEEEEEEEELlllleeeelhhhHHHHlllllleeeeEE


DSSP  EEellllLLEEEEL..............................................
Query CAcgygcGSWDIRN..............................................   59
ident            |                                                
Sbjct VK....hTTCAIIIneaesglxkdflnwakklvppdgefehniidnnghahvisaiigns   96
DSSP  EL....lLLEEEEEelllhhhhhhhhhhhhhhlllllllhhhhllllhhhhhhhhhhlle


DSSP  ................LLEEEELLllLLLEEEEEEEEL.
Query ................GNTCHCQCsvMDWASARCCRMA.   81
ident                                        
Sbjct rvvpiiegkldlgtwqRIILLEFD.gPRTRTVLVKSXGe  134
DSSP  eeeeeelleellllllEEEEEELL.lLLEEEEEEEEEEl


No 8: 1A34A  MOLECULE: PROTEIN (SATELLITE TOBACCO MOSAIC VIRUS);                  

DSSP  .........LLHHhhhHHHLlllLLLLLLLLEEEEEELLLL...leeELLLL........
Query .........CSFEslvDQRIkeaLSRQEPKTISCTSVTSSG...rlaSCPAG........   40
ident                             |          |         | |        
Sbjct tgdnsnvvtMIRA...GSYP...KVNPTPTWVRAIPFEVSVqsgiafKVPVGslfsanfr   54
DSSP  lllllllllLLLL...LLLL...LLLLLLLEEEEEEEEEELllllleEEEHHhhllhhhl


DSSP  ........leeEEEEELLL.....lLLEEEELL...........................
Query ........mvvTGCACGYG.....cGSWDIRNG...........................   60
ident                                                             
Sbjct tdsftsvtvmsVRAWTQLTppvneySFVRLKPLfktgdsteefegrasnintrasvgyri  114
DSSP  lllllleeeeeEEEEELLLllllllLEEEEEELllllllllleeeelllllllleeeeel


DSSP  ..............LEEEELlllLLLEEEEEEEEL.
Query ..............NTCHCQcsvMDWASARCCRMA.   81
ident                                     
Sbjct ptnlrqntvaadnvCEVRSN...CRQVALVISCCFn  147
DSSP  lhhhlllllllleeEEEEEL...LLEEEEEEEEEEl