DaliLite: Structural Neighbours

Query: 1RGXC MOLECULE: RESISTIN;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1RGX-A 14.4  0.7   89    89  100   RESISTIN;                                                  "         
   2:  1RH7-A 12.8  3.1   81    81   41   RESISTIN-LIKE BETA;                                        "         
   3:  2P4E-A  4.8 11.9   80   494   10   PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             "         
   4:  2CZ8-A  3.3  3.0   47    67   11   TT0972 PROTEIN;                                            "         
   5:  1Z1W-A  3.2  3.0   59   780    5   TRICORN PROTEASE INTERACTING FACTOR F3;                    "         
   6:  1ZHQ-A  2.6  3.2   43   113    0   MANNAN-BINDING LECTIN;                                     "         
   7:  2BYG-A  2.3  3.1   43    98    7   CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110;                 "         
   8:  1XRS-B  2.3  2.3   37   212    8   D-LYSINE 5,6-AMINOMUTASE ALPHA SUBUNIT;                    "         
   9:  2BBD-A  2.2  6.3   65   323    3   COAT PROTEIN;                                              "         
  10:  2CSJ-A  2.1  3.8   52   117   12   TJP2 PROTEIN;                                              "         
  11:  1VE0-A  2.1  2.4   48   134    4   HYPOTHETICAL PROTEIN (ST2072);                             "         
  12:  1Q3O-A  2.1  3.4   46   104    7   SHANK1;                                                    "         
-

No 1: 1RGXA  MOLECULE: RESISTIN;                                                  

DSSP  lllllLHHHHHHHHHHHHHHHHHHHHHHLLEEEEEEEEEEELLEEELLLLLEEEEEEELL
Query ssmplCPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGS   60
ident      |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct .....CPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGS   55
DSSP  .....LLHHHHHHHHHHHHHHHHHHHHHLLEEEEEEEEEEELLEEELLLLLEEEEEEELL


DSSP  LLLLEEEELLLEEEELLLLLLEEEEEEEEEEELL
Query ACGSWDIREEKVCHCQCARIDWTAARCCKLQVAS   94
ident ||||||||||||||||||||||||||||||||||
Sbjct ACGSWDIREEKVCHCQCARIDWTAARCCKLQVAS   89
DSSP  LLLLEEEELLLEEEELLLLLLEEEEEEEEEEELL


No 2: 1RH7A  MOLECULE: RESISTIN-LIKE BETA;                                        

DSSP  llllllHHHHhHHHHHHHHHHHHHHhhhLLEEEEEEEEEEELLEEELLLLLEEEEEEELL
Query ssmplcPIDEaIDKKIKQDFNSLFPnaiKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGS   60
ident          |                        |  | | | ||||| |  |  | || 
Sbjct ......CSFE.SLVDQRIKEALSRQ...EPKTISCTSVTSSGRLASCPAGMVVTGCACGY   50
DSSP  ......LLLL.HHHHHHHLLLLLLL...LLLLEEEEEEEEELLEEELLLLLEEEEEEEHH


DSSP  LLLLEEEELLLEEEELLLLLLEEEEEEEEEEell
Query ACGSWDIREEKVCHCQCARIDWTAARCCKLQvas   94
ident  |||||||    |||||   ||  ||||      
Sbjct GCGSWDIRNGNTCHCQCSVMDWASARCCRMA...   81
DSSP  HLLLEEEELLLEEEELLLLLLEEEEEEEEEL...


No 3: 2P4EA  MOLECULE: PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             

DSSP  ................................lLLLL.......................
Query ................................sSMPL.......................    5
ident                                                             
Sbjct sipwnleritppryraggslvevylldtsiqsdHREIegrvmvtdfenvpeedqaskcds   60
DSSP  lllhhhhhllllllllllllleeeeeellllllLLLLllleeeeeeelllllllhhhhlh


DSSP  ..........LHHHHHHH..........................................
Query ..........CPIDEAID..........................................   13
ident                                                             
Sbjct hgthlagvvsGRDAGVAKgasmrslrvlncqgkgtvsgtliglefirksqlvqpvgplvv  120
DSSP  hhhhhhhhhhLLLLLLLLlleeeeeelllllleeehhhhhhhhhhhhhhhhhllllleee


DSSP  ............................................................
Query ............................................................   13
ident                                                             
Sbjct llplaggysrvlnaacqrlaragvvlvtaagnfrddaclyspasapevitvgatnaqdqp  180
DSSP  eeleeeellhhhhhhhhhhhhllleeeeelllllllhhheellllllleeeeeellllll


DSSP  ............................................................
Query ............................................................   13
ident                                                             
Sbjct vtlgtlgtnfgrcvdlfapgediigassdcstcfvsqsgtsqaaahvagiaammlsaepe  240
DSSP  leelleelllllllleeeellleeeellllllleeeellhhhhhhhhhhhhhhhhhhlll


DSSP  .................................hhhhhhHHHHHhhhhLLEEEEEEEE.E
Query .................................kkikqdFNSLFpnaiKNIGLNCWTV.S   39
ident                                          |                  
Sbjct ltlaelrqrlihfsakdvineawfpedqrvltpnlvaalPPSTH....WQLFCRTVWSaH  296
DSSP  llhhhhhhhhhhhleellllhhhllhhhlllllleelllLLLLL....LLLEEEEEELlL


DSSP  EEL...LEEELLL.....LLEEeEEEELlLLLLEEEELL.......LEEEELLlLLLEEE
Query SRG...KLASCPE.....GTAVlSCSCGsACGSWDIREE.......KVCHCQCaRIDWTA   84
ident |       |              |            | |          |          
Sbjct SGPtrmATAIARCapdeeLLSC.SSFSR.SGKRRGERMEaqggklvCRAHNAF.GGEGVY  353
DSSP  LLLlllLEEEELLlllleEEEE.EEELL.LLLEEEEEEEelllleeEEEEELL.LLLLLE


DSSP  EEEEEEEELL..................................................
Query ARCCKLQVAS..................................................   94
ident |                                                           
Sbjct AIARCCLLPQancsvhtappaeasmgtrvhchqqghvltgcsshwevedlgpnqcvghre  413
DSSP  EEEEEEELLLleeeeeeelllllllleeeellllleeeeeeeeellllllllleeeelll


DSSP  ............................................................
Query ............................................................   94
ident                                                             
Sbjct asihascchapgleckvkehgipapqeqvtvaceegwtltgcsalpgtshvlgayavdnt  473
DSSP  leeeeeeeellleeeeeeeeeeelllleeeeellllleeeeeeelllllleeeeeeelle


DSSP  .....................
Query .....................   94
ident                      
Sbjct cvvrsrseeavtavaiccrsr  494
DSSP  eeeeelllleeeeeeeeeeel


No 4: 2CZ8A  MOLECULE: TT0972 PROTEIN;                                            

DSSP  llllllhhhhhhhhhhhhhhhhhhhhhhLLEEEEEEEEEEELL..EEEL...........
Query ssmplcpideaidkkikqdfnslfpnaiKNIGLNCWTVSSRGK..LASC...........   47
ident                             |          |      |             
Sbjct ...........................gKVYKKVELVGTSEEGleAAIQaalararktlr   33
DSSP  ...........................lLEEEEEEEEEEELLLhhHHHHhhhhhhhhhll


DSSP  .llLLEEEEEEELLlllleeeellleeeellLLLLEEEEEEEEEEELL.
Query .peGTAVLSCSCGSacgswdireekvchcqcARIDWTAARCCKLQVAS.   94
ident       |                        |                 
Sbjct hldWFEVKEIRGTI...............geAGVKEYQVVLEVGFRLEe   67
DSSP  leeEEEEEEEEEEE...............elLEEEEEEEEEEEEEELLl


No 5: 1Z1WA  MOLECULE: TRICORN PROTEASE INTERACTING FACTOR F3;                    

DSSP  llllllhhhhhhhhhhhhhhhhhhhhhhlLEEEEEEEEEEEL...LEEELLLLLEEEEEE
Query ssmplcpideaidkkikqdfnslfpnaikNIGLNCWTVSSRG...KLASCPEGTAVLSCS   57
ident                                     |               |       
Sbjct ...............mevekydltldfdiQKRTFNGTETITAdagDIVLDAVGLQINWMK   45
DSSP  ...............lleeeeeeeeeeelLLLEEEEEEEEEElleEEEEELLLLEEEEEE


DSSP  ELlLLLLEEEEL.lLEEEELLLLlLEEEEEEEEEE.........................
Query CGsACGSWDIRE.eKVCHCQCARiDWTAARCCKLQ.........................   91
ident                |                                            
Sbjct VN.GRDTAFTYDgqTVRAPGDSQpQKIEISFAGKVsdslsgiyyagrengmitthfeatd  104
DSSP  EL.LLEELLEELllEEEEEEELLlLEEEEEEEEELllllleeeeellllleeeeelllll


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct arrmfpcvdhpaykavfaitvvidkdydaisnmppkrievserkvvefqdtprmstylly  164
DSSP  hhhlllllllllllleeeeeeeelllleeeellleeeeeellleeeeelllllllhhhll


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct vgigkfryeyekyrdidlilaslkdirskypldmarksvefyenyfgipyalpkmhlisv  224
DSSP  eeeelleeeeeeelleeeeeeelllllllhhhhhhhhhhhhhhhhhllllllleeeeeee


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct pefgagamenwgaitfreiymdiaensavtvkrnsanviaheiahqwfgdlvtmkwwndl  284
DSSP  lllllleelllleeeeehhhhlllllllhhhhhhhhhhhhhhhhhlllllleellllllh


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct wlnesfatfmsyktmdtlfpewsfwgdffvsrtsgalrsdslknthpievdvrdpdeisq  344
DSSP  hhhhhhhhhhhhhhhhhhlhhhlhhhhhhhhlhhhhhhhlllllllllllllllllllll


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct ifdeisygkgasilrmiedyagyeefrkgiskylndhkfgnaegsdlwtaiedvsgkpvk  404
DSSP  lllllllhhhhhhhhhhhhhhlhhhhhhhhhhhhhhllleellhhhhhhhhhhhhlllhh


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct rvmeywiknpgypviklkrngrkitmyqtrfllngeeegrwpvpvnikkkdgverilled  464
DSSP  hhhhhhhhlllleeeeeeellleeeeeeeeelllleeelllleeeeeelllleeeeeell


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct easieadglikinadsagfyrvlyddatfsdvmghyrdlspldriglvddlfafllsghi  524
DSSP  leeeellllleelhhhlllleeeelhhhhhhhhhlhhhllhhhhhhhhhhhhhhhhhlll


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct dpetyrqrirnffddedhnvitaivgqmeylrmlthafdddarafcrsrmqfltgkqden  584
DSSP  lhhhhhhhhhlllllllhhhhhhhhhhhhhhlllllllhhhhhhhhhhhhhhhlllllhh


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct lkialgrvsrlyvmvdesyaeemsklfkdfdsaepemrssiatayalvtgdlkgllekfr  644
DSSP  hhhhhhhhhhhhhhhlhhhhhhhhhhhhhlllllhhhhhhhhhhhhhhlllhhhhhhhhh


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct svdrdedrvriisafgklksntdlstvygmvekteikkqdmisffssaletlpgrefifa  704
DSSP  lllllhhhhhhhhhhhhllllllllllllllllllllhhhlhhhhhhhlllhhhhhhhhh


DSSP  ............................................................
Query ............................................................   91
ident                                                             
Sbjct nldriirlviryftgnrtasrtvemmipvigldhpdaedivrnigsknismglakgieml  764
DSSP  hhhhlhhhhhhhlllllhhhhhhhhhhhhhllllllhhhhhhllllllhhhhhhhhhhhh


DSSP  .............ell
Query .............vas   94
ident                 
Sbjct avnrklverirqtavk  780
DSSP  hhhhhhhhhhllllll


No 6: 1ZHQA  MOLECULE: MANNAN-BINDING LECTIN;                                     

DSSP  llllllhhhhhhhhhhhhhhhhhhhhhhlleEEEEEEEEEELL..........eeELLL.
Query ssmplcpideaidkkikqdfnslfpnaikniGLNCWTVSSRGK..........laSCPE.   49
ident                                                             
Sbjct ...............................ASYKVNIPAGPLwsnaeaqqvgpkIAAAh   29
DSSP  ...............................LEEEEEEEEELLllhhhhhhhhhhHHHHl


DSSP  LLEEE.EEEELLlllleeeellleeeelllLLLEEEEEEEEEEELL..............
Query GTAVL.SCSCGSacgswdireekvchcqcaRIDWTAARCCKLQVAS..............   94
ident                                                             
Sbjct QGNFTgQWTTVV..................ESAMSVVEVELQVENTgihefktdvlagpl   71
DSSP  LLEEEeEEEEEE..................LLLEEEEEEEEELLLLllleeeeeeeeell


DSSP  ..........................................
Query ..........................................   94
ident                                           
Sbjct wsndeaqklgpqiaasygaeftgqwrtivegvmsviqikytf  113
DSSP  llhhhhhhhhhhhhhlllleeeeeeeeeellleeeeeeeeel


No 7: 2BYGA  MOLECULE: CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110;                 

DSSP  llllllhhhhhhhhhhhhhhhhhhhhhhlLEEEEEEEEEEEL..................
Query ssmplcpideaidkkikqdfnslfpnaikNIGLNCWTVSSRG..................   42
ident                                                             
Sbjct .............................FQSMTVVEIKLFKgpkglgfsiaggvgnqhi   31
DSSP  .............................LEEEEEEEEEEELlllllleeeeelllllll


DSSP  ..................leeeLLLLLEEEEEE.......ellllLLEEeellleeeell
Query ..................klasCPEGTAVLSCS.......cgsacGSWDireekvchcqc   77
ident                          |   |                              
Sbjct pgdnsiyvtkiidggaaqkdgrLQVGDRLLMVNnysleevtheeaVAIL..........k   81
DSSP  llllleeeeeellllhhhhhllLLLLLEEEEELleelllllhhhhHHHH..........h


DSSP  llLLEEEEEEEEEEELL
Query arIDWTAARCCKLQVAS   94
ident            |     
Sbjct ntSEVVYLKVGKPTTIY   98
DSSP  llLLEEEEEEEEEEELL


No 8: 1XRSB  MOLECULE: D-LYSINE 5,6-AMINOMUTASE ALPHA SUBUNIT;                    

DSSP  llllllhhhhhhhhhhhhhhhhhhhhhhlleeEEEEEEEEELLE......eELLL.....
Query ssmplcpideaidkkikqdfnslfpnaiknigLNCWTVSSRGKL......aSCPE.....   49
ident                                           |                 
Sbjct ................................KVQLSFTLPLKNnersaeaAKQIalkmg   28
DSSP  ................................LEEEEEEELLLLlhhhhhhHHHHhhlll


DSSP  ..LLEEEEEEELllllleeeellleeeellllLLEEEEEEEEE.................
Query ..GTAVLSCSCGsacgswdireekvchcqcarIDWTAARCCKL.................   90
ident      |                             |                        
Sbjct leEPSVVMQQSL...................dEEFTFFVVYGNeilsmeetdeyikenig   69
DSSP  llLLEEEEEEEE...................eLLEEEEEEEELllllhhhhhhhhhhhll


DSSP  ............................................................
Query ............................................................   90
ident                                                             
Sbjct rkivvvgastgtdahtvgidaimnmkgyaghygleryemidaynlgsqvanedfikkave  129
DSSP  lleeeeeeelllllllhhhhhhhllllllllllhhhllleeeeellllllhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   90
ident                                                             
Sbjct leadvllvsqtvtqknvhiqnmthlielleaeglrdrfvllcggprinneiakelgydag  189
DSSP  lllleeeeelllllllhhhhhhhhhhhhhhhlllhhhleeeeelllllhhhhhlllllee


DSSP  ...................eell
Query ...................qvas   94
ident                        
Sbjct fgpgrfaddvatfavktlndrmn  212
DSSP  elllllhhhhhhhhhhhhhhhhl


No 9: 2BBDA  MOLECULE: COAT PROTEIN;                                              

DSSP  .......llllllhhhhhhhhhhhHHHH................................
Query .......ssmplcpideaidkkikQDFN................................   21
ident                            |                                
Sbjct geiytetlqqtyawtagtnipikiPRNNfirkirvqligsisnsgtaavtlpsapfpynl   60
DSSP  leeeeeelllleellllleeeeeeLLLLeeeeeeeeeeeeeeellllleelllllllhhh


DSSP  ............................................................
Query ............................................................   21
ident                                                             
Sbjct vqtfnlsyegsktlysvsgtglgilxyyttkgqnpaypapgtsvpasgsvnlnvxwefdl  120
DSSP  eeeeeeeellleeeeeeehhhhhhhhhhhlllllleellllleellleeeeeeeeeeeee


DSSP  ....hHHHH...............................................hhll
Query ....sLFPN...............................................aikn   30
ident                                                             
Sbjct arfpaTXVQniilsiltgqapsgvsinasfyitityervtaqeilsegglgadgexplat  180
DSSP  eeelhHHLLleeeeeeellllllleeeeeeeeeeeeeellhhhhhhllllllllllllll


DSSP  EEEEEEEEEEELL.......eeELLLL...leeEEEEELL.......LLLLEEEEL....
Query IGLNCWTVSSRGK.......laSCPEG...tavLSCSCGS.......ACGSWDIRE....   69
ident                                                             
Sbjct VLPKVIEIPTFNVpassapihvAYLQPgqiykrQLVYVINstsginnTDPTEYELKivrg  240
DSSP  LEEEEEEEEEEEElllllleeeEELLLlleeeeEEEEEELlllllllLLEEEEEEEelll


DSSP  ....................................................lLEEEeLL
Query ....................................................eKVCHcQC   77
ident                                                             
Sbjct vptdkikvswaalqaenqaeyqvapysgasaiidfrkyfngdldlthapsdsiEYDL.AL  299
DSSP  lleeeeeeehhhhhhhhhhhhlllllllleeeeehhhllllleelllllllleEEEE.EE


DSSP  LLLLEEEEEEEEEEELL.......
Query ARIDWTAARCCKLQVAS.......   94
ident    |                    
Sbjct QNQDNVYSLYVSYVLPYydqlaal  323
DSSP  LLLEEEEEEEEEEELLLhhhhhll


No 10: 2CSJA  MOLECULE: TJP2 PROTEIN;                                              

DSSP  llllllhhhhhhhhhhhHHHHHhhHHHHlLEEEEEEEEEEEL..................
Query ssmplcpideaidkkikQDFNSlfPNAIkNIGLNCWTVSSRG..................   42
ident                      |              ||                      
Sbjct .................GSSGS..SGME.EVIWEQYTVTLQKdskrgfgiavsggrdnph   40
DSSP  .................LLLLL..LLLL.LEEEEEEEEEEELllllllleeeelllllll


DSSP  ..................leeeLLLLLEEEEEEelllllleeeellleeEELLllLLEEE
Query ..................klasCPEGTAVLSCScgsacgswdireekvcHCQCarIDWTA   84
ident                         |   |                              |
Sbjct fengetsivisdvlpggpadglLQENDRVVMVN..gtpmedvlhsfavqQLRK.sGKIAA   97
DSSP  lllllllleeeeelllllhhhhLLLLLEEEEEL..llllllllhhhhhhHHHH.lLLEEE


DSSP  EEEEEEEELL..........
Query ARCCKLQVAS..........   94
ident                     
Sbjct IVVKRPRKVQvaplsgpssg  117
DSSP  EEEEEEEELLllllllllll


No 11: 1VE0A  MOLECULE: HYPOTHETICAL PROTEIN (ST2072);                             

DSSP  llllllhhhhhhhhhhhhhhhhhhhhhhllEEEEEEEEEEEL.......leeeLLLL...
Query ssmplcpideaidkkikqdfnslfpnaiknIGLNCWTVSSRG.......klasCPEG...   50
ident                                                             
Sbjct ..............................XKIISKEFTVKTrsrfdsiditeQVSEaik   30
DSSP  ..............................LEEEEEEEEEELlllleeeelhhHHHHhll


DSSP  ......LEEEEeeellllLLEEEEL...................................
Query ......TAVLScscgsacGSWDIRE...................................   69
ident         |             |                                     
Sbjct ginngiAHVIV.....khTTCAIIIneaesglxkdflnwakklvppdgefehniidnngh   85
DSSP  lllleeEEEEE.....llLLEEEEEelllhhhhhhhhhhhhhhlllllllhhhhllllhh


DSSP  ...........................lLEEEELLllLLEEEEEEEEEEEll
Query ...........................eKVCHCQCarIDWTAARCCKLQVas   94
ident                                                     
Sbjct ahvisaiignsrvvpiiegkldlgtwqrIILLEFD.gPRTRTVLVKSXGE..  134
DSSP  hhhhhhhhlleeeeeeelleelllllleEEEEELL.lLLEEEEEEEEEEL..


No 12: 1Q3OA  MOLECULE: SHANK1;                                                    

DSSP  llllllhhhhhhhhhhhhhhhhhhhhhhlLEEEEEEEEEEEL..................
Query ssmplcpideaidkkikqdfnslfpnaikNIGLNCWTVSSRG..................   42
ident                                     ||                      
Sbjct .............................DYIIKEKTVLLQKkdsegfgfvlrgakaqtp   31
DSSP  .............................LEEEEEEEEEEELllllllleeeeellllll


DSSP  .........................leeeLLLLLEEEEEE.....ellllLLEEeellle
Query .........................klasCPEGTAVLSCS.....cgsacGSWDireekv   72
ident                                 |                           
Sbjct ieeftptpafpalqylesvdeggvawragLRMGDFLIEVNgqnvvkvghrQVVN......   85
DSSP  llllllllllllleeeeeellllhhhhllLLLLLEEEEELleelllllhhHHHH......


DSSP  eEELLllLLEEEEEEEEEEELl
Query cHCQCarIDWTAARCCKLQVAs   94
ident                       
Sbjct .MIRQ.gGNTLMVKVVMVTRH.  104
DSSP  .HHHH.lLLEEEEEEEEEELL.