DaliLite: Structural Neighbours

Query: 1RGXB MOLECULE: RESISTIN;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1RGX-A 14.4  0.5   89    89  100   RESISTIN;                                                  "         
   2:  1RH7-A 12.9  2.7   81    81   42   RESISTIN-LIKE BETA;                                        "         
   3:  2P4E-A  7.5 10.9   77   494   26   PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             "         
   4:  2CZ8-A  3.3  2.8   45    67    9   TT0972 PROTEIN;                                            "         
   5:  1Z1W-A  3.3  3.2   60   780    5   TRICORN PROTEASE INTERACTING FACTOR F3;                    "         
   6:  2BYG-A  2.3  3.1   43    98    7   CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110;                 "         
   7:  2CSJ-A  2.2  4.3   55   117    9   TJP2 PROTEIN;                                              "         
   8:  2BBD-A  2.2  9.3   68   323    1   COAT PROTEIN;                                              "         
   9:  1SDW-A  2.2 11.5   73   312   10   PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE;            "         
  10:  1Q3O-A  2.2  3.4   46   104    7   SHANK1;                                                    "         
  11:  1VE0-A  2.0  2.5   48   134    4   HYPOTHETICAL PROTEIN (ST2072);                             "         
-

No 1: 1RGXA  MOLECULE: RESISTIN;                                                  

DSSP  LLLHHHHHHHHHHHHHHHHHHHHHLEEEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE
Query CPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct CPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
DSSP  LLHHHHHHHHHHHHHHHHHHHHHLLEEEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE


DSSP  EEELLLEEEELLLLLLEEEEEEEEEEELL
Query DIREEKVCHCQCARIDWTAARCCKLQVAS   89
ident |||||||||||||||||||||||||||||
Sbjct DIREEKVCHCQCARIDWTAARCCKLQVAS   89
DSSP  EEELLLEEEELLLLLLEEEEEEEEEEELL


No 2: 1RH7A  MOLECULE: RESISTIN-LIKE BETA;                                        

DSSP  lLLHHHHHHHHHHHHHHHHHhhhhLEEEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE
Query cPIDEAIDKKIKQDFNSLFPnaikNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
ident     |           |            |  | | | ||||| |  |  | ||  ||||
Sbjct .CSFESLVDQRIKEALSRQE....PKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSW   55
DSSP  .LLLLHHHHHHHLLLLLLLL....LLLEEEEEEEEELLEEELLLLLEEEEEEEHHHLLLE


DSSP  EEELLLEEEELLLLLLEEEEEEEEEEell
Query DIREEKVCHCQCARIDWTAARCCKLQvas   89
ident |||    |||||   ||  ||||      
Sbjct DIRNGNTCHCQCSVMDWASARCCRMA...   81
DSSP  EEELLLEEEELLLLLLEEEEEEEEEL...


No 3: 2P4EA  MOLECULE: PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             

DSSP  lllhHHHHHHHHHHHHHH..........................................
Query cpidEAIDKKIKQDFNSL..........................................   18
ident                                                             
Sbjct ....SIPWNLERITPPRYraggslvevylldtsiqsdhreiegrvmvtdfenvpeedqas   56
DSSP  ....LLLHHHHHLLLLLLllllllleeeeeellllllllllllleeeeeeelllllllhh


DSSP  ............................................................
Query ............................................................   18
ident                                                             
Sbjct kcdshgthlagvvsgrdagvakgasmrslrvlncqgkgtvsgtliglefirksqlvqpvg  116
DSSP  hhlhhhhhhhhhhhlllllllllleeeeeelllllleeehhhhhhhhhhhhhhhhhllll


DSSP  ............................................................
Query ............................................................   18
ident                                                             
Sbjct plvvllplaggysrvlnaacqrlaragvvlvtaagnfrddaclyspasapevitvgatna  176
DSSP  leeeeeleeeellhhhhhhhhhhhhllleeeeelllllllhhheellllllleeeeeell


DSSP  ............................................................
Query ............................................................   18
ident                                                             
Sbjct qdqpvtlgtlgtnfgrcvdlfapgediigassdcstcfvsqsgtsqaaahvagiaammls  236
DSSP  llllleelleelllllllleeeellleeeellllllleeeellhhhhhhhhhhhhhhhhh


DSSP  ............................................HHHHhhlEEEEEEEEE
Query ............................................FPNAiknIGLNCWTVS   34
ident                                                      | | || 
Sbjct aepeltlaelrqrlihfsakdvineawfpedqrvltpnlvaalpPSTH...WQLFCRTVW  293
DSSP  hlllllhhhhhhhhhhhleellllhhhllhhhlllllleellllLLLL...LLLEEEEEE


DSSP  EEL........LEEELLLLLEEEEEEELL...lLLLEEEEL...LLEEEELLL...LLLE
Query SRG........KLASCPEGTAVLSCSCGS...aCGSWDIRE...EKVCHCQCA...RIDW   77
ident |            | |      ||||  |                 ||    |       
Sbjct SAHsgptrmatAIARCAPDEELLSCSSFSrsgkRRGERMEAqggKLVCRAHNAfggEGVY  353
DSSP  LLLllllllleEEELLLLLLEEEEEEEELllllEEEEEEEElllLEEEEEEELlllLLLE


DSSP  EEEEEEEE....................................................
Query TAARCCKL....................................................   85
ident   |||| |                                                    
Sbjct AIARCCLLpqancsvhtappaeasmgtrvhchqqghvltgcsshwevedlgpnqcvghre  413
DSSP  EEEEEEELllleeeeeeelllllllleeeellllleeeeeeeeellllllllleeeelll


DSSP  ............................................................
Query ............................................................   85
ident                                                             
Sbjct asihascchapgleckvkehgipapqeqvtvaceegwtltgcsalpgtshvlgayavdnt  473
DSSP  leeeeeeeellleeeeeeeeeeelllleeeeellllleeeeeeelllllleeeeeeelle


DSSP  .................eell
Query .................qvas   89
ident                      
Sbjct cvvrsrseeavtavaiccrsr  494
DSSP  eeeeelllleeeeeeeeeeel


No 4: 2CZ8A  MOLECULE: TT0972 PROTEIN;                                            

DSSP  lllhhhhhhhhhhhhhhhhhhhhHLEEEEEEEEEEElLEEE...............lllL
Query cpideaidkkikqdfnslfpnaiKNIGLNCWTVSSRgKLAS...............cpeG   45
ident                        |          |                         
Sbjct ......................gKVYKKVELVGTSE.EGLEaaiqaalararktlrhldW   37
DSSP  ......................lLEEEEEEEEEEEL.LLHHhhhhhhhhhhhhhllleeE


DSSP  LEEEEEEELLlllleeeellleeeellLLLLEEEEEEEEEEELL.
Query TAVLSCSCGSacgswdireekvchcqcARIDWTAARCCKLQVAS.   89
ident   |                        |                 
Sbjct FEVKEIRGTI...............geAGVKEYQVVLEVGFRLEe   67
DSSP  EEEEEEEEEE...............elLEEEEEEEEEEEEEELLl


No 5: 1Z1WA  MOLECULE: TRICORN PROTEASE INTERACTING FACTOR F3;                    

DSSP  lllhhhhhhhhhhhhhhhhhhhhHLEEEEEEEEEEEL...LEEELLLLLEEEEEEELlll
Query cpideaidkkikqdfnslfpnaiKNIGLNCWTVSSRG...KLASCPEGTAVLSCSCGsac   57
ident                                |               |            
Sbjct ..........mevekydltldfdIQKRTFNGTETITAdagDIVLDAVGLQINWMKVN..g   48
DSSP  ..........lleeeeeeeeeeeLLLLEEEEEEEEEElleEEEEELLLLEEEEEEEL..l


DSSP  LLEEEELL..LEEEELLLLLLEEEEEEEEEE.............................
Query GSWDIREE..KVCHCQCARIDWTAARCCKLQ.............................   86
ident            |                                                
Sbjct RDTAFTYDgqTVRAPGDSQPQKIEISFAGKVsdslsgiyyagrengmitthfeatdarrm  108
DSSP  LEELLEELllEEEEEEELLLLEEEEEEEEELllllleeeeellllleeeeelllllhhhl


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct fpcvdhpaykavfaitvvidkdydaisnmppkrievserkvvefqdtprmstyllyvgig  168
DSSP  llllllllllleeeeeeeelllleeeellleeeeeellleeeeelllllllhhhlleeee


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct kfryeyekyrdidlilaslkdirskypldmarksvefyenyfgipyalpkmhlisvpefg  228
DSSP  lleeeeeeelleeeeeeelllllllhhhhhhhhhhhhhhhhhllllllleeeeeeellll


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct agamenwgaitfreiymdiaensavtvkrnsanviaheiahqwfgdlvtmkwwndlwlne  288
DSSP  lleelllleeeeehhhhlllllllhhhhhhhhhhhhhhhhhlllllleellllllhhhhh


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct sfatfmsyktmdtlfpewsfwgdffvsrtsgalrsdslknthpievdvrdpdeisqifde  348
DSSP  hhhhhhhhhhhhhhlhhhlhhhhhhhhlhhhhhhhlllllllllllllllllllllllll


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct isygkgasilrmiedyagyeefrkgiskylndhkfgnaegsdlwtaiedvsgkpvkrvme  408
DSSP  lllhhhhhhhhhhhhhhlhhhhhhhhhhhhhhllleellhhhhhhhhhhhhlllhhhhhh


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct ywiknpgypviklkrngrkitmyqtrfllngeeegrwpvpvnikkkdgverilledeasi  468
DSSP  hhhhlllleeeeeeellleeeeeeeeelllleeelllleeeeeelllleeeeeellleee


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct eadglikinadsagfyrvlyddatfsdvmghyrdlspldriglvddlfafllsghidpet  528
DSSP  ellllleelhhhlllleeeelhhhhhhhhhlhhhllhhhhhhhhhhhhhhhhhllllhhh


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct yrqrirnffddedhnvitaivgqmeylrmlthafdddarafcrsrmqfltgkqdenlkia  588
DSSP  hhhhhhlllllllhhhhhhhhhhhhhhlllllllhhhhhhhhhhhhhhhlllllhhhhhh


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct lgrvsrlyvmvdesyaeemsklfkdfdsaepemrssiatayalvtgdlkgllekfrsvdr  648
DSSP  hhhhhhhhhhhlhhhhhhhhhhhhhlllllhhhhhhhhhhhhhhlllhhhhhhhhhllll


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct dedrvriisafgklksntdlstvygmvekteikkqdmisffssaletlpgrefifanldr  708
DSSP  lhhhhhhhhhhhhllllllllllllllllllllhhhlhhhhhhhlllhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct iirlviryftgnrtasrtvemmipvigldhpdaedivrnigsknismglakgiemlavnr  768
DSSP  lhhhhhhhlllllhhhhhhhhhhhhhllllllhhhhhhllllllhhhhhhhhhhhhhhhh


DSSP  .........ell
Query .........vas   89
ident             
Sbjct klverirqtavk  780
DSSP  hhhhhhllllll


No 6: 2BYGA  MOLECULE: CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110;                 

DSSP  lllhhhhhhhhhhhhhhhhhhhhhLEEEEEEEEEEEL.......................
Query cpideaidkkikqdfnslfpnaikNIGLNCWTVSSRG.......................   37
ident                                                             
Sbjct ........................FQSMTVVEIKLFKgpkglgfsiaggvgnqhipgdns   36
DSSP  ........................LEEEEEEEEEEELlllllleeeeellllllllllll


DSSP  .............leeeLLLLLEEEEEE.......ellllLLEEeellleeeellllLLE
Query .............klasCPEGTAVLSCS.......cgsacGSWDireekvchcqcarIDW   77
ident                     |   |                                   
Sbjct iyvtkiidggaaqkdgrLQVGDRLLMVNnysleevtheeaVAIL..........kntSEV   86
DSSP  eeeeeellllhhhhhllLLLLLEEEEELleelllllhhhhHHHH..........hllLLE


DSSP  EEEEEEEEEELL
Query TAARCCKLQVAS   89
ident       |     
Sbjct VYLKVGKPTTIY   98
DSSP  EEEEEEEEEELL


No 7: 2CSJA  MOLECULE: TJP2 PROTEIN;                                              

DSSP  lllhhhhhhhhHHHHHhhhHHHHhlEEEEEEEEEEEL.......................
Query cpideaidkkiKQDFNslfPNAIknIGLNCWTVSSRG.......................   37
ident                                ||                           
Sbjct ..........gSSGSS...GMEE..VIWEQYTVTLQKdskrgfgiavsggrdnphfenge   45
DSSP  ..........lLLLLL...LLLL..EEEEEEEEEEELllllllleeeellllllllllll


DSSP  .............leeeLLLLLEEEEEE.....ellllLLEEeellleeEELLllLLEEE
Query .............klasCPEGTAVLSCS.....cgsacGSWDireekvcHCQCarIDWTA   79
ident                    |   |                                   |
Sbjct tsivisdvlpggpadglLQENDRVVMVNgtpmedvlhsFAVQ.......QLRK.sGKIAA   97
DSSP  llleeeeelllllhhhhLLLLLEEEEELllllllllhhHHHH.......HHHH.lLLEEE


DSSP  EEEEEEEELL..........
Query ARCCKLQVAS..........   89
ident                     
Sbjct IVVKRPRKVQvaplsgpssg  117
DSSP  EEEEEEEELLllllllllll


No 8: 2BBDA  MOLECULE: COAT PROTEIN;                                              

DSSP  lllhhhhHHHH.........hhhhHHHHHH..............................
Query cpideaiDKKI.........kqdfNSLFPN..............................   21
ident                                                             
Sbjct geiytetLQQTyawtagtnipikiPRNNFIrkirvqligsisnsgtaavtlpsapfpynl   60
DSSP  leeeeeeLLLLeellllleeeeeeLLLLEEeeeeeeeeeeeeellllleelllllllhhh


DSSP  ............................................................
Query ............................................................   21
ident                                                             
Sbjct vqtfnlsyegsktlysvsgtglgilxyyttkgqnpaypapgtsvpasgsvnlnvxwefdl  120
DSSP  eeeeeeeellleeeeeeehhhhhhhhhhhlllllleellllleellleeeeeeeeeeeee


DSSP  ........................................................hhhl
Query ........................................................aikn   25
ident                                                             
Sbjct arfpatxvqniilsiltgqapsgvsinasfyitityervtaqeilsegglgadgexplat  180
DSSP  eeelhhhllleeeeeeellllllleeeeeeeeeeeeeellhhhhhhllllllllllllll


DSSP  EEEEEEEEEEELL.......eEELLLL...leeEEEEELL.......LLLLEEEEL....
Query IGLNCWTVSSRGK.......lASCPEG...tavLSCSCGS.......ACGSWDIRE....   64
ident                                                             
Sbjct VLPKVIEIPTFNVpassapihVAYLQPgqiykrQLVYVINstsginnTDPTEYELKivrg  240
DSSP  LEEEEEEEEEEEElllllleeEEELLLlleeeeEEEEEELlllllllLLEEEEEEEelll


DSSP  ....................................................lLEEEeLL
Query ....................................................eKVCHcQC   72
ident                                                             
Sbjct vptdkikvswaalqaenqaeyqvapysgasaiidfrkyfngdldlthapsdsiEYDL.AL  299
DSSP  lleeeeeeehhhhhhhhhhhhlllllllleeeeehhhllllleelllllllleEEEE.EE


DSSP  LLLLEEEEEEEEEEELL.......
Query ARIDWTAARCCKLQVAS.......   89
ident    |                    
Sbjct QNQDNVYSLYVSYVLPYydqlaal  323
DSSP  LLLEEEEEEEEEEELLLhhhhhll


No 9: 1SDWA  MOLECULE: PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE;            

DSSP  ....LLLHhhHHHHhhHHHHH.......................................
Query ....CPIDeaIDKKikQDFNS.......................................   17
ident       |          |                                          
Sbjct neclGTIG..PVTP..LDASDfaldirmpgvtpkesdtyfcmsmrlpvdeeafvidfkpr   56
DSSP  llllLLLL..LEEE..EELLEeeeeeelllllllllleeeeeeeelllllleeeeeeeee


DSSP  ............................................................
Query ............................................................   17
ident                                                             
Sbjct asmdtvhhmllfgcnmpsstgsywfcdegtctdkanilyawarnapptrlpkgvgfrvgg  116
DSSP  llllleeeeeeeeellllllllleehhhllllllleeeeeeellllllllllleeeeell


DSSP  ...............................hhhhhhHLEEEEEEEEEEE..........
Query ...............................lfpnaiKNIGLNCWTVSSR..........   36
ident                                                 |           
Sbjct etgskyfvlqvhygdisafrdnhkdcsgvsvhltrvpQPLIAGMYLMMSVdtvippgekv  176
DSSP  llllleeeeeeeellllhhhhlllllleeeeeeelllLLEEEEEEEEELLlleellllll


DSSP  .lLEEELLLL.....leeEEEEELLLLLLEEEELL.........................
Query .gKLASCPEG.....tavLSCSCGSACGSWDIREE.........................   65
ident      ||                                                     
Sbjct vnADISCQYKmypmhvfaYRVHTHHLGKVVSGYRVrngqwtligrqnpqlpqafypvehp  236
DSSP  eeEEEEEELLllleeeeeEEEELLLLEEEEEEEEEelleeeeeeeelllllllleeeeee


DSSP  ........LEEEELLL..............llLEEEEEEEEEEELL..............
Query ........KVCHCQCA..............riDWTAARCCKLQVAS..............   89
ident             |                               |               
Sbjct vdvtfgdiLAARCVFTgegrteathiggtssdEMCNLYIMYYMEAKyalsfmtctknvap  296
DSSP  eeelllleEEEEEEELllllllleelllllllLLLEEEEEEEEEHHhllleeeelllllh


DSSP  ................
Query ................   89
ident                 
Sbjct dmfrtipaeanipipv  312
DSSP  hhhhhllhhhhlllll


No 10: 1Q3OA  MOLECULE: SHANK1;                                                    

DSSP  lllhhhhhhhhhhhhhhhhhhhhhLEEEEEEEEEEEL.......................
Query cpideaidkkikqdfnslfpnaikNIGLNCWTVSSRG.......................   37
ident                                ||                           
Sbjct ........................DYIIKEKTVLLQKkdsegfgfvlrgakaqtpieeft   36
DSSP  ........................LEEEEEEEEEEELllllllleeeeelllllllllll


DSSP  ....................leeeLLLLLEEEEEE.....ellllLLEEeellleeEELL
Query ....................klasCPEGTAVLSCS.....cgsacGSWDireekvcHCQC   72
ident                            |                                
Sbjct ptpafpalqylesvdeggvawragLRMGDFLIEVNgqnvvkvghrQVVN.......MIRQ   89
DSSP  lllllllleeeeeellllhhhhllLLLLLEEEEELleelllllhhHHHH.......HHHH


DSSP  llLLEEEEEEEEEEELl
Query arIDWTAARCCKLQVAs   89
ident                  
Sbjct .gGNTLMVKVVMVTRH.  104
DSSP  .lLLEEEEEEEEEELL.


No 11: 1VE0A  MOLECULE: HYPOTHETICAL PROTEIN (ST2072);                             

DSSP  lllhhhhhhhhhhhhhhhhhhhhhlEEEEEEEEEEEL.......leeeLLLL........
Query cpideaidkkikqdfnslfpnaiknIGLNCWTVSSRG.......klasCPEG........   45
ident                                                             
Sbjct .........................XKIISKEFTVKTrsrfdsiditeQVSEaikginng   35
DSSP  .........................LEEEEEEEEEELlllleeeelhhHHHHhlllllle


DSSP  .LEEEEeeellllLLEEEEL........................................
Query .TAVLScscgsacGSWDIRE........................................   64
ident    |             |                                          
Sbjct iAHVIV.....khTTCAIIIneaesglxkdflnwakklvppdgefehniidnnghahvis   90
DSSP  eEEEEE.....llLLEEEEEelllhhhhhhhhhhhhhhlllllllhhhhllllhhhhhhh


DSSP  ......................lLEEEELLllLLEEEEEEEEEEEll
Query ......................eKVCHCQCarIDWTAARCCKLQVas   89
ident                                                
Sbjct aiignsrvvpiiegkldlgtwqrIILLEFD.gPRTRTVLVKSXGE..  134
DSSP  hhhlleeeeeeelleelllllleEEEEELL.lLLEEEEEEEEEEL..