DaliLite: Structural Neighbours

Query: 1RGXA MOLECULE: RESISTIN;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1RGX-A 15.4  0.0   89    89  100   RESISTIN;                                                  "         
   2:  1RH7-A 12.9  3.2   81    81   40   RESISTIN-LIKE BETA;                                        "         
   3:  2P4E-A  4.8 11.2   76   494    9   PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             "         
   4:  2CZ8-A  3.3  3.2   46    67    9   TT0972 PROTEIN;                                            "         
   5:  1Z1W-A  3.0  3.2   57   780    5   TRICORN PROTEASE INTERACTING FACTOR F3;                    "         
   6:  1ZHQ-A  2.6  2.5   41   113    0   MANNAN-BINDING LECTIN;                                     "         
   7:  2BYG-A  2.4  3.1   43    98    7   CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110;                 "         
   8:  2CSJ-A  2.2  3.6   51   117   10   TJP2 PROTEIN;                                              "         
   9:  2BBD-A  2.2  4.5   73   323    7   COAT PROTEIN;                                              "         
  10:  1SDW-A  2.2 11.8   73   312    8   PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE;            "         
  11:  1Q3O-A  2.2  3.5   46   104    7   SHANK1;                                                    "         
-

No 1: 1RGXA  MOLECULE: RESISTIN;                                                  

DSSP  LLHHHHHHHHHHHHHHHHHHHHHLLEEEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE
Query CPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct CPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
DSSP  LLHHHHHHHHHHHHHHHHHHHHHLLEEEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE


DSSP  EEELLLEEEELLLLLLEEEEEEEEEEELL
Query DIREEKVCHCQCARIDWTAARCCKLQVAS   89
ident |||||||||||||||||||||||||||||
Sbjct DIREEKVCHCQCARIDWTAARCCKLQVAS   89
DSSP  EEELLLEEEELLLLLLEEEEEEEEEEELL


No 2: 1RH7A  MOLECULE: RESISTIN-LIKE BETA;                                        

DSSP  llHHHHHHHHHHHHHHHHHHhhhLLEEEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE
Query cpIDEAIDKKIKQDFNSLFPnaiKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
ident                              |  | | | ||||| |  |  | ||  ||||
Sbjct ..CSFESLVDQRIKEALSRQ...EPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSW   55
DSSP  ..LLLLHHHHHHHLLLLLLL...LLLLEEEEEEEEELLEEELLLLLEEEEEEEHHHLLLE


DSSP  EEELLLEEEELLLLLLEEEEEEEEEEell
Query DIREEKVCHCQCARIDWTAARCCKLQvas   89
ident |||    |||||   ||  ||||      
Sbjct DIRNGNTCHCQCSVMDWASARCCRMA...   81
DSSP  EEELLLEEEELLLLLLEEEEEEEEEL...


No 3: 2P4EA  MOLECULE: PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             

DSSP  LLHHhhhhhHHHHH..............................................
Query CPIDeaidkKIKQD..............................................   14
ident                                                             
Sbjct SIPWnleriTPPRYraggslvevylldtsiqsdhreiegrvmvtdfenvpeedqaskcds   60
DSSP  LLLHhhhhlLLLLLllllllleeeeeellllllllllllleeeeeeelllllllhhhhlh


DSSP  ............................................................
Query ............................................................   14
ident                                                             
Sbjct hgthlagvvsgrdagvakgasmrslrvlncqgkgtvsgtliglefirksqlvqpvgplvv  120
DSSP  hhhhhhhhhhlllllllllleeeeeelllllleeehhhhhhhhhhhhhhhhhllllleee


DSSP  ............................................................
Query ............................................................   14
ident                                                             
Sbjct llplaggysrvlnaacqrlaragvvlvtaagnfrddaclyspasapevitvgatnaqdqp  180
DSSP  eeleeeellhhhhhhhhhhhhllleeeeelllllllhhheellllllleeeeeellllll


DSSP  ............................................................
Query ............................................................   14
ident                                                             
Sbjct vtlgtlgtnfgrcvdlfapgediigassdcstcfvsqsgtsqaaahvagiaammlsaepe  240
DSSP  leelleelllllllleeeellleeeellllllleeeellhhhhhhhhhhhhhhhhhhlll


DSSP  ........................................HHHHhhhhhLLEEEEEEEE.
Query ........................................FNSLfpnaiKNIGLNCWTV.   33
ident                                                             
Sbjct ltlaelrqrlihfsakdvineawfpedqrvltpnlvaalpPSTH.....WQLFCRTVWSa  295
DSSP  llhhhhhhhhhhhleellllhhhllhhhlllllleellllLLLL.....LLLEEEEEELl


DSSP  EEEL...LEEELLL.....LLEEeEEEELlLLLLEEEELL.......LEEEELLlLLLEE
Query SSRG...KLASCPE.....GTAVlSCSCGsACGSWDIREE.......KVCHCQCaRIDWT   78
ident  |       |              |            | |          |         
Sbjct HSGPtrmATAIARCapdeeLLSC.SSFSR.SGKRRGERMEaqggklvCRAHNAF.GGEGV  352
DSSP  LLLLlllLEEEELLlllleEEEE.EEELL.LLLEEEEEEEelllleeEEEEELL.LLLLL


DSSP  EEEEEEEEELL.................................................
Query AARCCKLQVAS.................................................   89
ident  |                                                          
Sbjct YAIARCCLLPQancsvhtappaeasmgtrvhchqqghvltgcsshwevedlgpnqcvghr  412
DSSP  EEEEEEEELLLleeeeeeelllllllleeeellllleeeeeeeeellllllllleeeell


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct easihascchapgleckvkehgipapqeqvtvaceegwtltgcsalpgtshvlgayavdn  472
DSSP  lleeeeeeeellleeeeeeeeeeelllleeeeellllleeeeeeelllllleeeeeeell


DSSP  ......................
Query ......................   89
ident                       
Sbjct tcvvrsrseeavtavaiccrsr  494
DSSP  eeeeeelllleeeeeeeeeeel


No 4: 2CZ8A  MOLECULE: TT0972 PROTEIN;                                            

DSSP  llhhhhhhhhhhhhhhhhhhhhhLLEEEEEEEEEEElLEEE...............lllL
Query cpideaidkkikqdfnslfpnaiKNIGLNCWTVSSRgKLAS...............cpeG   45
ident                        |          |                         
Sbjct ......................gKVYKKVELVGTSE.EGLEaaiqaalararktlrhldW   37
DSSP  ......................lLEEEEEEEEEEEL.LLHHhhhhhhhhhhhhhllleeE


DSSP  LEEEEEEELLlllleeeellleeeelLLLLLEEEEEEEEEEELL.
Query TAVLSCSCGSacgswdireekvchcqCARIDWTAARCCKLQVAS.   89
ident   |                        |                 
Sbjct FEVKEIRGTI...............gEAGVKEYQVVLEVGFRLEe   67
DSSP  EEEEEEEEEE...............eLLEEEEEEEEEEEEEELLl


No 5: 1Z1WA  MOLECULE: TRICORN PROTEASE INTERACTING FACTOR F3;                    

DSSP  llhhhhhhhhhhhhhhhhhhhhhLLEEEEEEEeEEEL...lEEELLLLLEEEEEEELlLL
Query cpideaidkkikqdfnslfpnaiKNIGLNCWTvSSRG...kLASCPEGTAVLSCSCGsAC   57
ident                                |               |            
Sbjct ..........mevekydltldfdIQKRTFNGTeTITAdagdIVLDAVGLQINWMKVN.GR   49
DSSP  ..........lleeeeeeeeeeeLLLLEEEEEeEEEElleeEEEELLLLEEEEEEEL.LL


DSSP  LLEEEEL.lLEEEELLLllLEEEEEEEEEE..............................
Query GSWDIRE.eKVCHCQCAriDWTAARCCKLQ..............................   86
ident           |                                                 
Sbjct DTAFTYDgqTVRAPGDSqpQKIEISFAGKVsdslsgiyyagrengmitthfeatdarrmf  109
DSSP  EELLEELllEEEEEEELllLEEEEEEEEELllllleeeeellllleeeeelllllhhhll


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct pcvdhpaykavfaitvvidkdydaisnmppkrievserkvvefqdtprmstyllyvgigk  169
DSSP  lllllllllleeeeeeeelllleeeellleeeeeellleeeeelllllllhhhlleeeel


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct fryeyekyrdidlilaslkdirskypldmarksvefyenyfgipyalpkmhlisvpefga  229
DSSP  leeeeeeelleeeeeeelllllllhhhhhhhhhhhhhhhhhllllllleeeeeeelllll


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct gamenwgaitfreiymdiaensavtvkrnsanviaheiahqwfgdlvtmkwwndlwlnes  289
DSSP  leelllleeeeehhhhlllllllhhhhhhhhhhhhhhhhhlllllleellllllhhhhhh


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct fatfmsyktmdtlfpewsfwgdffvsrtsgalrsdslknthpievdvrdpdeisqifdei  349
DSSP  hhhhhhhhhhhhhlhhhlhhhhhhhhlhhhhhhhllllllllllllllllllllllllll


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct sygkgasilrmiedyagyeefrkgiskylndhkfgnaegsdlwtaiedvsgkpvkrvmey  409
DSSP  llhhhhhhhhhhhhhhlhhhhhhhhhhhhhhllleellhhhhhhhhhhhhlllhhhhhhh


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct wiknpgypviklkrngrkitmyqtrfllngeeegrwpvpvnikkkdgverilledeasie  469
DSSP  hhhlllleeeeeeellleeeeeeeeelllleeelllleeeeeelllleeeeeellleeee


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct adglikinadsagfyrvlyddatfsdvmghyrdlspldriglvddlfafllsghidpety  529
DSSP  llllleelhhhlllleeeelhhhhhhhhhlhhhllhhhhhhhhhhhhhhhhhllllhhhh


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct rqrirnffddedhnvitaivgqmeylrmlthafdddarafcrsrmqfltgkqdenlkial  589
DSSP  hhhhhlllllllhhhhhhhhhhhhhhlllllllhhhhhhhhhhhhhhhlllllhhhhhhh


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct grvsrlyvmvdesyaeemsklfkdfdsaepemrssiatayalvtgdlkgllekfrsvdrd  649
DSSP  hhhhhhhhhhlhhhhhhhhhhhhhlllllhhhhhhhhhhhhhhlllhhhhhhhhhlllll


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct edrvriisafgklksntdlstvygmvekteikkqdmisffssaletlpgrefifanldri  709
DSSP  hhhhhhhhhhhhllllllllllllllllllllhhhlhhhhhhhlllhhhhhhhhhhhhhl


DSSP  ............................................................
Query ............................................................   86
ident                                                             
Sbjct irlviryftgnrtasrtvemmipvigldhpdaedivrnigsknismglakgiemlavnrk  769
DSSP  hhhhhhhlllllhhhhhhhhhhhhhllllllhhhhhhllllllhhhhhhhhhhhhhhhhh


DSSP  ........ell
Query ........vas   89
ident            
Sbjct lverirqtavk  780
DSSP  hhhhhllllll


No 6: 1ZHQA  MOLECULE: MANNAN-BINDING LECTIN;                                     

DSSP  llhhhhhhhhhhhhhhhhhhhhhlleEEEEEEEEEELL..........eeELLL.LLEEE
Query cpideaidkkikqdfnslfpnaikniGLNCWTVSSRGK..........laSCPE.GTAVL   49
ident                                                             
Sbjct ..........................ASYKVNIPAGPLwsnaeaqqvgpkIAAAhQGNFT   34
DSSP  ..........................LEEEEEEEEELLllhhhhhhhhhhHHHHlLLEEE


DSSP  .EEEELLlllleeeellleeeelllLLLEEEEEEEEEEE.....................
Query .SCSCGSacgswdireekvchcqcaRIDWTAARCCKLQV.....................   87
ident                                                             
Sbjct gQWTTVV..................ESAMSVVEVELQVEntgihefktdvlagplwsnde   76
DSSP  eEEEEEE..................LLLEEEEEEEEELLllllleeeeeeeeellllhhh


DSSP  ...................................ll
Query ...................................as   89
ident                                      
Sbjct aqklgpqiaasygaeftgqwrtivegvmsviqikytf  113
DSSP  hhhhhhhhhhlllleeeeeeeeeellleeeeeeeeel


No 7: 2BYGA  MOLECULE: CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110;                 

DSSP  llhhhhhhhhhhhhhhhhhhhhhlLEEEEEEEEEEEL.......................
Query cpideaidkkikqdfnslfpnaikNIGLNCWTVSSRG.......................   37
ident                                                             
Sbjct ........................FQSMTVVEIKLFKgpkglgfsiaggvgnqhipgdns   36
DSSP  ........................LEEEEEEEEEEELlllllleeeeellllllllllll


DSSP  .............leeeLLLLLEEEEEE.......ellllLLEEeellleeeellllLLE
Query .............klasCPEGTAVLSCS.......cgsacGSWDireekvchcqcarIDW   77
ident                     |   |                                   
Sbjct iyvtkiidggaaqkdgrLQVGDRLLMVNnysleevtheeaVAIL..........kntSEV   86
DSSP  eeeeeellllhhhhhllLLLLLEEEEELleelllllhhhhHHHH..........hllLLE


DSSP  EEEEEEEEEELL
Query TAARCCKLQVAS   89
ident       |     
Sbjct VYLKVGKPTTIY   98
DSSP  EEEEEEEEEELL


No 8: 2CSJA  MOLECULE: TJP2 PROTEIN;                                              

DSSP  llhhhhhhhhhhHHHHhhHHHHhlLEEEEEEEEEEEL.......................
Query cpideaidkkikQDFNslFPNAikNIGLNCWTVSSRG.......................   37
ident                                ||                           
Sbjct ...........gSSGS..SGME..EVIWEQYTVTLQKdskrgfgiavsggrdnphfenge   45
DSSP  ...........lLLLL..LLLL..LEEEEEEEEEEELllllllleeeellllllllllll


DSSP  .............leeeLLLLLEEEEEEelllllleeeellleeEELLllLLEEEEEEEE
Query .............klasCPEGTAVLSCScgsacgswdireekvcHCQCarIDWTAARCCK   84
ident                    |   |                              |     
Sbjct tsivisdvlpggpadglLQENDRVVMVN..gtpmedvlhsfavqQLRK.sGKIAAIVVKR  102
DSSP  llleeeeelllllhhhhLLLLLEEEEEL..llllllllhhhhhhHHHH.lLLEEEEEEEE


DSSP  EEELL..........
Query LQVAS..........   89
ident                
Sbjct PRKVQvaplsgpssg  117
DSSP  EEELLllllllllll


No 9: 2BBDA  MOLECULE: COAT PROTEIN;                                              

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct geiytetlqqtyawtagtnipikiprnnfirkirvqligsisnsgtaavtlpsapfpynl   60
DSSP  leeeeeelllleellllleeeeeelllleeeeeeeeeeeeeeellllleelllllllhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct vqtfnlsyegsktlysvsgtglgilxyyttkgqnpaypapgtsvpasgsvnlnvxwefdl  120
DSSP  eeeeeeeellleeeeeeehhhhhhhhhhhlllllleellllleellleeeeeeeeeeeee


DSSP  .............................llhhhhhhhhHHHHHHHHH.......hHHHL
Query .............................cpideaidkkIKQDFNSLF.......pNAIK   24
ident                                          |   |              
Sbjct arfpatxvqniilsiltgqapsgvsinasfyitityervTAQEILSEGglgadgexPLAT  180
DSSP  eeelhhhllleeeeeeellllllleeeeeeeeeeeeeelLHHHHHHLLllllllllLLLL


DSSP  lEEEEEEEEEEELL........EEELLLL..leeEEEEELL........LLLLEEEEL..
Query nIGLNCWTVSSRGK........LASCPEG..tavLSCSCGS........ACGSWDIRE..   64
ident                        |    |                               
Sbjct .VLPKVIEIPTFNVpassapihVAYLQPGqiykrQLVYVINstsginntDPTEYELKIvr  239
DSSP  .LEEEEEEEEEEEElllllleeEEELLLLleeeeEEEEEELllllllllLEEEEEEEEll


DSSP  ....................................................lLEEEELL
Query ....................................................eKVCHCQC   72
ident                                                             
Sbjct gvptdkikvswaalqaenqaeyqvapysgasaiidfrkyfngdldlthapsdsIEYDLAL  299
DSSP  llleeeeeeehhhhhhhhhhhhlllllllleeeeehhhllllleellllllllEEEEEEE


DSSP  LLLLEEEEEEEEEEELL.......
Query ARIDWTAARCCKLQVAS.......   89
ident    |                    
Sbjct QNQDNVYSLYVSYVLPYydqlaal  323
DSSP  LLLEEEEEEEEEEELLLhhhhhll


No 10: 1SDWA  MOLECULE: PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE;            

DSSP  ...LLHHHHhhHHHHhhHHHH.......................................
Query ...CPIDEAidKKIKqdFNSL.......................................   18
ident                    |                                        
Sbjct necLGTIGP..VTPL..DASDfaldirmpgvtpkesdtyfcmsmrlpvdeeafvidfkpr   56
DSSP  lllLLLLLL..EEEE..ELLEeeeeeelllllllllleeeeeeeelllllleeeeeeeee


DSSP  ............................................................
Query ............................................................   18
ident                                                             
Sbjct asmdtvhhmllfgcnmpsstgsywfcdegtctdkanilyawarnapptrlpkgvgfrvgg  116
DSSP  llllleeeeeeeeellllllllleehhhllllllleeeeeeellllllllllleeeeell


DSSP  ................................hhhhhlLEEEEEEEEEEE..........
Query ................................fpnaikNIGLNCWTVSSR..........   36
ident                                                 |           
Sbjct etgskyfvlqvhygdisafrdnhkdcsgvsvhltrvpqPLIAGMYLMMSVdtvippgekv  176
DSSP  llllleeeeeeeellllhhhhlllllleeeeeeellllLEEEEEEEEELLlleellllll


DSSP  .lLEEELLLL.....leeEEEEELLLLLLEEEELL.........................
Query .gKLASCPEG.....tavLSCSCGSACGSWDIREE.........................   65
ident      ||                                                     
Sbjct vnADISCQYKmypmhvfaYRVHTHHLGKVVSGYRVrngqwtligrqnpqlpqafypvehp  236
DSSP  eeEEEEEELLllleeeeeEEEELLLLEEEEEEEEEelleeeeeeeelllllllleeeeee


DSSP  ........LEEEELLL..............llLEEEEEEEEEEELL..............
Query ........KVCHCQCA..............riDWTAARCCKLQVAS..............   89
ident             |                               |               
Sbjct vdvtfgdiLAARCVFTgegrteathiggtssdEMCNLYIMYYMEAKyalsfmtctknvap  296
DSSP  eeelllleEEEEEEELllllllleelllllllLLLEEEEEEEEEHHhllleeeelllllh


DSSP  ................
Query ................   89
ident                 
Sbjct dmfrtipaeanipipv  312
DSSP  hhhhhllhhhhlllll


No 11: 1Q3OA  MOLECULE: SHANK1;                                                    

DSSP  llhhhhhhhhhhhhhhhhhhhhhlLEEEEEEEEEEEL.......................
Query cpideaidkkikqdfnslfpnaikNIGLNCWTVSSRG.......................   37
ident                                ||                           
Sbjct ........................DYIIKEKTVLLQKkdsegfgfvlrgakaqtpieeft   36
DSSP  ........................LEEEEEEEEEEELllllllleeeeelllllllllll


DSSP  ....................leeeLLLLLEEEEEE.....ellllLLEEeellleeEELL
Query ....................klasCPEGTAVLSCS.....cgsacGSWDireekvcHCQC   72
ident                            |                                
Sbjct ptpafpalqylesvdeggvawragLRMGDFLIEVNgqnvvkvghrQVVN.......MIRQ   89
DSSP  lllllllleeeeeellllhhhhllLLLLLEEEEELleelllllhhHHHH.......HHHH


DSSP  llLLEEEEEEEEEEELl
Query arIDWTAARCCKLQVAs   89
ident                  
Sbjct .gGNTLMVKVVMVTRH.  104
DSSP  .lLLEEEEEEEEEELL.