DaliLite: Structural Neighbours

Query: 1RFXA MOLECULE: RESISTIN;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1RGX-A 13.4  1.8   89    89  100   RESISTIN;                                                  "         
   2:  1RH7-A 12.2  3.4   81    81   40   RESISTIN-LIKE BETA;                                        "         
   3:  2P4E-A  4.7 11.1   81   494    7   PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             "         
   4:  1Z1W-A  3.3  3.4   53   780    6   TRICORN PROTEASE INTERACTING FACTOR F3;                    "         
   5:  2CZ8-A  3.2  2.7   46    67    9   TT0972 PROTEIN;                                            "         
   6:  1PM4-A  3.2  2.3   53   117    4   YPM;                                                       "         
   7:  1ZHQ-A  2.8  2.1   40   113    0   MANNAN-BINDING LECTIN;                                     "         
   8:  2BYG-A  2.5  3.1   43    98    7   CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110;                 "         
   9:  2CSJ-A  2.2  5.0   55   117    9   TJP2 PROTEIN;                                              "         
  10:  1W8X-A  2.1  3.8   63   380    3   MAJOR CAPSID PROTEIN (PROTEIN P3);                         "         
-

No 1: 1RGXA  MOLECULE: RESISTIN;                                                  

DSSP  LHHHHHHHHHHHHHHHHHHHHHHLLEEEEEEEEEEELLEEELLLLLEEEEEELLLLLLLE
Query CPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct CPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
DSSP  LLHHHHHHHHHHHHHHHHHHHHHLLEEEEEEEEEEELLEEELLLLLEEEEEEELLLLLLE


DSSP  EEELLLEEEELLLLLLEEEEEEEEEEELL
Query DIREEKVCHCQCARIDWTAARCCKLQVAS   89
ident |||||||||||||||||||||||||||||
Sbjct DIREEKVCHCQCARIDWTAARCCKLQVAS   89
DSSP  EEELLLEEEELLLLLLEEEEEEEEEEELL


No 2: 1RH7A  MOLECULE: RESISTIN-LIKE BETA;                                        

DSSP  lhHHHHHHHHHHHHHHHHHHhhhLLEEEEEEEEEEELLEEELLLLLEEEEEELLLLLLLE
Query cpIDEAIDKKIKQDFNSLFPnaiKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW   60
ident                              |  | | | ||||| |  |  | ||  ||||
Sbjct ..CSFESLVDQRIKEALSRQ...EPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSW   55
DSSP  ..LLLLHHHHHHHLLLLLLL...LLLLEEEEEEEEELLEEELLLLLEEEEEEEHHHLLLE


DSSP  EEELLLEEEELLLLLLEEEEEEEEEEell
Query DIREEKVCHCQCARIDWTAARCCKLQvas   89
ident |||    |||||   ||  ||||      
Sbjct DIRNGNTCHCQCSVMDWASARCCRMA...   81
DSSP  EEELLLEEEELLLLLLEEEEEEEEEL...


No 3: 2P4EA  MOLECULE: PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9;             

DSSP  lhhhHHHHHHHhHHHHH...........................................
Query cpidEAIDKKIkQDFNS...........................................   17
ident                                                             
Sbjct ....SIPWNLErITPPRyraggslvevylldtsiqsdhreiegrvmvtdfenvpeedqas   56
DSSP  ....LLLHHHHhLLLLLlllllllleeeeeellllllllllllleeeeeeelllllllhh


DSSP  ............................................................
Query ............................................................   17
ident                                                             
Sbjct kcdshgthlagvvsgrdagvakgasmrslrvlncqgkgtvsgtliglefirksqlvqpvg  116
DSSP  hhlhhhhhhhhhhhlllllllllleeeeeelllllleeehhhhhhhhhhhhhhhhhllll


DSSP  ............................................................
Query ............................................................   17
ident                                                             
Sbjct plvvllplaggysrvlnaacqrlaragvvlvtaagnfrddaclyspasapevitvgatna  176
DSSP  leeeeeleeeellhhhhhhhhhhhhllleeeeelllllllhhheellllllleeeeeell


DSSP  ............................................................
Query ............................................................   17
ident                                                             
Sbjct qdqpvtlgtlgtnfgrcvdlfapgediigassdcstcfvsqsgtsqaaahvagiaammls  236
DSSP  llllleelleelllllllleeeellleeeellllllleeeellhhhhhhhhhhhhhhhhh


DSSP  ...........................................hHHHHhlLEEEEEEEEE
Query ...........................................lFPNAikNIGLNCWTVS   34
ident                                                            |
Sbjct aepeltlaelrqrlihfsakdvineawfpedqrvltpnlvaalpPSTH..WQLFCRTVWS  294
DSSP  hlllllhhhhhhhhhhhleellllhhhllhhhlllllleellllLLLL..LLLEEEEEEL


DSSP  EEL......LEEELLL..LLEEEEEELLL.LLLLEEEEL.....LLEEEELLL.LLLEEE
Query SRG......KLASCPE..GTAVLSCSCGS.ACGSWDIRE.....EKVCHCQCA.RIDWTA   79
ident                          |            |                    |
Sbjct AHSgptrmaTAIARCApdEELLSCSSFSRsGKRRGERMEaqggkLVCRAHNAFgGEGVYA  354
DSSP  LLLllllllEEEELLLllLEEEEEEEELLlLLEEEEEEEellllEEEEEEELLlLLLLEE


DSSP  EEEEEE......................................................
Query ARCCKL......................................................   85
ident    | |                                                      
Sbjct IARCCLlpqancsvhtappaeasmgtrvhchqqghvltgcsshwevedlgpnqcvghrea  414
DSSP  EEEEEElllleeeeeeelllllllleeeellllleeeeeeeeellllllllleeeellll


DSSP  ............................................................
Query ............................................................   85
ident                                                             
Sbjct sihascchapgleckvkehgipapqeqvtvaceegwtltgcsalpgtshvlgayavdntc  474
DSSP  eeeeeeeellleeeeeeeeeeelllleeeeellllleeeeeeelllllleeeeeeellee


DSSP  ................EELL
Query ................QVAS   89
ident                     
Sbjct vvrsrseeavtavaicCRSR  494
DSSP  eeeelllleeeeeeeeEEEL


No 4: 1Z1WA  MOLECULE: TRICORN PROTEASE INTERACTING FACTOR F3;                    

DSSP  lhhhhhhhhhhhhhhhhhhhhhhllEEEEEEEEEEEL...leeelLLLLEEEEEELLllL
Query cpideaidkkikqdfnslfpnaiknIGLNCWTVSSRG...klascPEGTAVLSCSCGsaC   57
ident                                |               |            
Sbjct ..........mevekydltldfdiqKRTFNGTETITAdagdivldAVGLQINWMKVN..G   48
DSSP  ..........lleeeeeeeeeeellLLEEEEEEEEEElleeeeeeLLLLEEEEEEEL..L


DSSP  LLEEEEL...lLEEEellLLLLEEEEEEEEEEELL.........................
Query GSWDIRE...eKVCHcqcARIDWTAARCCKLQVAS.........................   89
ident                                   |                         
Sbjct RDTAFTYdgqtVRAP.gdSQPQKIEISFAGKVSDSlsgiyyagrengmitthfeatdarr  107
DSSP  LEELLEEllleEEEE.eeLLLLEEEEEEEEELLLLlleeeeellllleeeeelllllhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct mfpcvdhpaykavfaitvvidkdydaisnmppkrievserkvvefqdtprmstyllyvgi  167
DSSP  lllllllllllleeeeeeeelllleeeellleeeeeellleeeeelllllllhhhlleee


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct gkfryeyekyrdidlilaslkdirskypldmarksvefyenyfgipyalpkmhlisvpef  227
DSSP  elleeeeeeelleeeeeeelllllllhhhhhhhhhhhhhhhhhllllllleeeeeeelll


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct gagamenwgaitfreiymdiaensavtvkrnsanviaheiahqwfgdlvtmkwwndlwln  287
DSSP  llleelllleeeeehhhhlllllllhhhhhhhhhhhhhhhhhlllllleellllllhhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct esfatfmsyktmdtlfpewsfwgdffvsrtsgalrsdslknthpievdvrdpdeisqifd  347
DSSP  hhhhhhhhhhhhhhhlhhhlhhhhhhhhlhhhhhhhllllllllllllllllllllllll


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct eisygkgasilrmiedyagyeefrkgiskylndhkfgnaegsdlwtaiedvsgkpvkrvm  407
DSSP  llllhhhhhhhhhhhhhhlhhhhhhhhhhhhhhllleellhhhhhhhhhhhhlllhhhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct eywiknpgypviklkrngrkitmyqtrfllngeeegrwpvpvnikkkdgverilledeas  467
DSSP  hhhhhlllleeeeeeellleeeeeeeeelllleeelllleeeeeelllleeeeeelllee


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct ieadglikinadsagfyrvlyddatfsdvmghyrdlspldriglvddlfafllsghidpe  527
DSSP  eellllleelhhhlllleeeelhhhhhhhhhlhhhllhhhhhhhhhhhhhhhhhllllhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct tyrqrirnffddedhnvitaivgqmeylrmlthafdddarafcrsrmqfltgkqdenlki  587
DSSP  hhhhhhhlllllllhhhhhhhhhhhhhhlllllllhhhhhhhhhhhhhhhlllllhhhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct algrvsrlyvmvdesyaeemsklfkdfdsaepemrssiatayalvtgdlkgllekfrsvd  647
DSSP  hhhhhhhhhhhhlhhhhhhhhhhhhhlllllhhhhhhhhhhhhhhlllhhhhhhhhhlll


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct rdedrvriisafgklksntdlstvygmvekteikkqdmisffssaletlpgrefifanld  707
DSSP  llhhhhhhhhhhhhllllllllllllllllllllhhhlhhhhhhhlllhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct riirlviryftgnrtasrtvemmipvigldhpdaedivrnigsknismglakgiemlavn  767
DSSP  hlhhhhhhhlllllhhhhhhhhhhhhhllllllhhhhhhllllllhhhhhhhhhhhhhhh


DSSP  .............
Query .............   89
ident              
Sbjct rklverirqtavk  780
DSSP  hhhhhhhllllll


No 5: 2CZ8A  MOLECULE: TT0972 PROTEIN;                                            

DSSP  lhhhhhhhhhhhhhhhhhhhhhhLLEEEEEEEEEEElLEEE...............lllL
Query cpideaidkkikqdfnslfpnaiKNIGLNCWTVSSRgKLAS...............cpeG   45
ident                        |          |                         
Sbjct ......................gKVYKKVELVGTSE.EGLEaaiqaalararktlrhldW   37
DSSP  ......................lLEEEEEEEEEEEL.LLHHhhhhhhhhhhhhhllleeE


DSSP  LEEEEEELLLLllleeeellleeeellLLLLEEEEEEEEEEELL.
Query TAVLSCSCGSAcgswdireekvchcqcARIDWTAARCCKLQVAS.   89
ident   |                        |                 
Sbjct FEVKEIRGTIG...............eAGVKEYQVVLEVGFRLEe   67
DSSP  EEEEEEEEEEE...............lLEEEEEEEEEEEEEELLl


No 6: 1PM4A  MOLECULE: YPM;                                                       

DSSP  lhhhhhhhhhhhhhhhhhhhhhhlleEEEEEEEEEEL...leeELLLL........leeE
Query cpideaidkkikqdfnslfpnaikniGLNCWTVSSRG...klaSCPEG........tavL   49
ident                             |  |                            
Sbjct ..........................IPNIATYTGTIqgkgevCIIGNkegktrggelyA   34
DSSP  ..........................LLLEEEEEEEElllleeEEEELllllllleeeeE


DSSP  EEEL.LLLLlLEEEELL.................................LEEEELLLLL
Query SCSC.GSACgSWDIREE.................................KVCHCQCARI   75
ident                                                             
Sbjct VLHStNVNA.DMTLILLrnvggngwgeikrndidkplkyedyytsglswiWKIKNNSSET   93
DSSP  EEELlLLLL.LEEEEEEeelllleeeeeeeeelllleeeeeeellllleeEEEEELLLLL


DSSP  LEEEEEEEEEE..........ell
Query DWTAARCCKLQ..........vas   89
ident                         
Sbjct SNYSLDATVHDdkedsdvltkcpv  117
DSSP  EEEEEEEELLLlllhhhlllllll


No 7: 1ZHQA  MOLECULE: MANNAN-BINDING LECTIN;                                     

DSSP  lhhhhhhhhhhhhhhhhhhhhhhlleEEEEEEEEEELL..........eeELLL.LLEEE
Query cpideaidkkikqdfnslfpnaikniGLNCWTVSSRGK..........laSCPE.GTAVL   49
ident                                                             
Sbjct ..........................ASYKVNIPAGPLwsnaeaqqvgpkIAAAhQGNFT   34
DSSP  ..........................LEEEEEEEEELLllhhhhhhhhhhHHHHlLLEEE


DSSP  .EEELLllllleeeellleeeelllLLLEEEEEEEEEEE.....................
Query .SCSCGsacgswdireekvchcqcaRIDWTAARCCKLQV.....................   87
ident                                                             
Sbjct gQWTTV..................vESAMSVVEVELQVEntgihefktdvlagplwsnde   76
DSSP  eEEEEE..................eLLLEEEEEEEEELLllllleeeeeeeeellllhhh


DSSP  ...................................ll
Query ...................................as   89
ident                                      
Sbjct aqklgpqiaasygaeftgqwrtivegvmsviqikytf  113
DSSP  hhhhhhhhhhlllleeeeeeeeeellleeeeeeeeel


No 8: 2BYGA  MOLECULE: CHANNEL ASSOCIATED PROTEIN OF SYNAPSE-110;                 

DSSP  lhhhhhhhhhhhhhhhhhhhhhhlLEEEEEEEEEEEL.......................
Query cpideaidkkikqdfnslfpnaikNIGLNCWTVSSRG.......................   37
ident                                                             
Sbjct ........................FQSMTVVEIKLFKgpkglgfsiaggvgnqhipgdns   36
DSSP  ........................LEEEEEEEEEEELlllllleeeeellllllllllll


DSSP  .............leeeLLLLLEEEEEE.......lllllLLEEeellleeeellllLLE
Query .............klasCPEGTAVLSCS.......cgsacGSWDireekvchcqcarIDW   77
ident                     |   |                                   
Sbjct iyvtkiidggaaqkdgrLQVGDRLLMVNnysleevtheeaVAIL..........kntSEV   86
DSSP  eeeeeellllhhhhhllLLLLLEEEEELleelllllhhhhHHHH..........hllLLE


DSSP  EEEEEEEEEELL
Query TAARCCKLQVAS   89
ident       |     
Sbjct VYLKVGKPTTIY   98
DSSP  EEEEEEEEEELL


No 9: 2CSJA  MOLECULE: TJP2 PROTEIN;                                              

DSSP  lhhhhhhhhhhHHHHHhhhHHHHllEEEEEEEEEEEL.......................
Query cpideaidkkiKQDFNslfPNAIknIGLNCWTVSSRG.......................   37
ident                                ||                           
Sbjct ..........gSSGSS...GMEE..VIWEQYTVTLQKdskrgfgiavsggrdnphfenge   45
DSSP  ..........lLLLLL...LLLL..EEEEEEEEEEELllllllleeeellllllllllll


DSSP  .............leeeLLLLLEEEEEE....lllllLLEEeellleeEELLllLLEEEE
Query .............klasCPEGTAVLSCS....cgsacGSWDireekvcHCQCarIDWTAA   80
ident                    |   |                                  | 
Sbjct tsivisdvlpggpadglLQENDRVVMVNgtpmedvlhSFAV......qQLRK.sGKIAAI   98
DSSP  llleeeeelllllhhhhLLLLLEEEEELllllllllhHHHH......hHHHH.lLLEEEE


DSSP  EEEEEEELL..........
Query RCCKLQVAS..........   89
ident                    
Sbjct VVKRPRKVQvaplsgpssg  117
DSSP  EEEEEEELLllllllllll


No 10: 1W8XA  MOLECULE: MAJOR CAPSID PROTEIN (PROTEIN P3);                         

DSSP  ...lhhhhhhhhhhhhHHHHHH......................................
Query ...cpideaidkkikqDFNSLF......................................   19
ident                                                             
Sbjct qqaalrnqqamaanlqARQIVLqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflv   60
DSSP  llhhhhhhhhhhhhhhHHHHHHhhleeeeeeeeeeeelllllleeeelllllleeeeeee


DSSP  ............................................................
Query ............................................................   19
ident                                                             
Sbjct kvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapfl  120
DSSP  eeeeeeeelllllleeelllhhhhleeeeeeellllleeeeeehhhhhhhhhhhhlllll


DSSP  ............................................................
Query ............................................................   19
ident                                                             
Sbjct ssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskq  180
DSSP  lllllllllllllllllllllleelllleeeeeeeeeeellllllllllleellllllll


DSSP  ...........................................................h
Query ...........................................................p   20
ident                                                             
Sbjct rlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilp  240
DSSP  eeeeeelllllleelllllllllleelllhhheeeeeeeeeeeeeeeellllllllllll


DSSP  hhhllEEEEEEEEEEELL.....eeELLL....LLEEeEEELL..LLLL.....leEEEL
Query naiknIGLNCWTVSSRGK.....laSCPE....GTAVlSCSCG..SACG.....swDIRE   64
ident         |       |                                           
Sbjct lidlsTLYNLENSAQAGLtpnvdfvVQYAnlyrYLST.IAVFDngGSFNagtdinyLSQR  299
DSSP  hhhhlEEEEEEEEEEELLllllleeEELLllleEEEE.EEEEEelLLLLlllleeeEEEE


DSSP  ................................................lLEEEELLLL..
Query ................................................eKVCHCQCAR..   74
ident                                                             
Sbjct tanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvGFVVNPKTVnq  359
DSSP  ellllllllllhhhhhhhhhhhhllllllleeeeellllllllllllleEEEEEELLLll


DSSP  lLEEEEEEEEEEELL......
Query iDWTAARCCKLQVAS......   89
ident                      
Sbjct nARLLMGYEYFTSRTelvnag  380
DSSP  lEEEEEEEEEEEELLllllll