DaliLite: Structural Neighbours

Query: 1PEVA MOLECULE: ACTIN INTERACTING PROTEIN 1;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1NR0-A 59.9  0.8  610   610  100   ACTIN INTERACTING PROTEIN 1;                               "         
   2:  1PGU-A 46.3  2.3  573   606   31   ACTIN INTERACTING PROTEIN 1;                               "         
   3:  1ERJ-A 33.9  2.2  279   350   15   TRANSCRIPTIONAL REPRESSOR TUP1;                            "         
   4:  2HES-X 32.3  2.2  273   308   18   YDR267CP;                                                  "         
   5:  2GNQ-A 32.1  2.4  279   316   16   WD-REPEAT PROTEIN 5;                                       "         
   6:  1VYH-C 32.0  2.3  278   310   18   PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB              "         
   7:  1B9X-A 31.9  2.6  282   340   14   PROTEIN (TRANSDUCIN);                                      "         
   8:  1L0Q-A 31.8  4.6  313   391   15   SURFACE LAYER PROTEIN;                                     "         
   9:  2CE8-A 30.7  2.6  281   337   13   TRANSDUCIN-LIKE ENHANCER PROTEIN 1;                        "         
  10:  1P22-A 29.4  2.3  266   402   21   F-BOX/WD-REPEAT PROTEIN 1A;                                "         
  11:  2I3S-A 29.2  2.5  278   334   13   CELL CYCLE ARREST PROTEIN;                                 "         
  12:  2PM6-B 27.8  2.3  249   279   19   PROTEIN TRANSPORT PROTEIN SEC31;                           "         
  13:  2IWF-A 27.8  9.9  319   590   11   NITROUS-OXIDE REDUCTASE;                                   "         
  14:  2PM9-A 27.4 15.9  299   384   12   PROTEIN TRANSPORT PROTEIN SEC31;                           "         
  15:  1RI6-A 27.0  2.6  276   333   12   PUTATIVE ISOMERASE YBHE;                                   "         
  16:  2OVP-B 26.8  3.1  288   441   17   S-PHASE KINASE-ASSOCIATED PROTEIN 1A;                      "         
  17:  2Z2N-A 26.6  2.6  265   293    8   VIRGINIAMYCIN B LYASE;                                     "         
  18:  1K8K-C 25.6  3.2  266   354   16   ACTIN-LIKE PROTEIN 3;                                      "         
  19:  1JV2-A 25.5  2.7  280   927   11   INTEGRIN, ALPHA V;                                         "         
  20:  1NEX-B 25.2  2.8  268   444   18   CENTROMERE DNA-BINDING PROTEIN COMPLEX CBF3                "         
  21:  1R5M-A 25.1  3.2  289   351   13   SIR4-INTERACTING PROTEIN SIF2;                             "         
  22:  1S4U-X 25.0  2.8  268   356   13   ANTIVIRAL PROTEIN SKI8;                                    "         
  23:  2B5L-A 24.4  3.1  270  1132   10   DAMAGE-SPECIFIC DNA BINDING PROTEIN 1;                     "         
  24:  1JOF-A 24.2  2.9  268   365    8   CARBOXY-CIS,CIS-MUCONATE CYCLASE;                          "         
  25:  2CN2-A 23.4  5.1  555   704   10   BETA-1,4-XYLOGLUCAN HYDROLASE;                             "         
  26:  2J04-B 23.1  3.1  282   471   11   HYPOTHETICAL PROTEIN YPL007C;                              "         
  27:  2EBS-A 22.2  4.9  547   770   10   OLIGOXYLOGLUCAN REDUCING END-SPECIFIC                      "         
  28:  1JJU-B 21.6  3.2  272   337    9   QUINOHEMOPROTEIN AMINE DEHYDROGENASE;                      "         
  29:  2OIT-A 21.4  3.3  281   434   12   NUCLEOPORIN 214KDA;                                        "         
  30:  2AQ5-A 21.2  3.0  262   395   16   CORONIN-1A;                                                "         
  31:  2OAJ-A 20.9  3.3  286   875    9   PROTEIN SNI1;                                              "         
  32:  2UZX-B 19.9  3.2  275   546    9   INTERNALIN B;                                              "         
  33:  2H3X-A 19.9  3.3  283   359   11   AROMATIC AMINE DEHYDROGENASE;                              "         
  34:  1MG2-A 19.4  3.6  283   382   10   METHYLAMINE DEHYDROGENASE, HEAVY CHAIN;                    "         
  35:  2HU5-A 19.2 11.0  329   573   10   ACYLAMINO-ACID-RELEASING ENZYME;                           "         
  36:  1MDA-H 19.0  3.5  280   368   11   METHYLAMINE DEHYDROGENASE (HEAVY SUBUNIT);                 "         
  37:  1AOF-A 19.0  3.4  258   532   12   NITRITE REDUCTASE;                                         "         
  38:  1OLZ-A 18.7  3.1  284   621    8   SEMAPHORIN 4D;                                             "         
  39:  1NPE-A 18.7  3.6  229   263   10   NIDOGEN;                                                   "         
  40:  1Q47-A 18.2  3.5  275   484    5   SEMAPHORIN 3A;                                             "         
  41:  2J04-A 18.1  3.7  259   587   12   HYPOTHETICAL PROTEIN YPL007C;                              "         
  42:  1XKS-A 17.7  3.7  265   374    9   NUCLEAR PORE COMPLEX PROTEIN NUP133;                       "         
  43:  1Q7F-A 17.0  3.7  217   279   11   BRAIN TUMOR CG10719-PA;                                    "         
  44:  2FP8-A 16.9  3.2  222   302    7   STRICTOSIDINE SYNTHASE;                                    "         
  45:  1JMX-B 16.8  3.4  249   339   10   AMINE DEHYDROGENASE;                                       "         
  46:  1N7D-A 16.1  3.6  232   639   10   LOW-DENSITY LIPOPROTEIN RECEPTOR;                          "         
  47:  1N6D-A 15.8  9.8  313  1023   11   TRICORN PROTEASE;                                          "         
  48:  1RWI-A 15.7  3.3  208   256   11   SERINE/THREONINE-PROTEIN KINASE PKND;                      "         
  49:  2P9W-A 15.4  4.0  233   333   10   MAL S 1 ALLERGENIC PROTEIN;                                "         
  50:  1XIP-A 15.0  3.9  258   367   10   NUCLEOPORIN NUP159;                                        "         
  51:  1C9U-A 15.0  3.4  229   444   10   SOLUBLE QUINOPROTEIN GLUCOSE DEHYDROGENASE;                "         
  52:  1V04-A 14.9  3.3  223   332    9   SERUM PARAOXONASE/ARYLESTERASE 1;                          "         
  53:  2GHS-A 14.7  3.7  223   294   14   AGR_C_1268P;                                               "         
  54:  1C5K-A 14.4  4.7  228   397   12   PROTEIN (TOLB PROTEIN);                                    "         
  55:  2P4O-A 14.3  3.5  224   302    7   HYPOTHETICAL PROTEIN;                                      "         
  56:  2DG0-A 14.0  3.2  197   322   10   DRP35;                                                     "         
  57:  1POO-A 13.9  3.8  231   353   10   PROTEIN (PHYTASE);                                         "         
  58:  2BIW-A 13.8  4.3  254   479    8   APOCAROTENOID-CLEAVING OXYGENASE;                          "         
  59:  1YIQ-A 13.7  3.6  243   684   10   QUINOHEMOPROTEIN ALCOHOL DEHYDROGENASE;                    "         
  60:  2F0Z-A 13.3  3.7  229   356    8   SIALIDASE 2;                                               "         
  61:  1IUB-A 13.3  3.8  242   312    5   FUCOSE-SPECIFIC LECTIN;                                    "         
  62:  1E1A-A 13.3  3.9  226   312    8   DIISOPROPYLFLUOROPHOSPHATASE;                              "         
  63:  1EUT-A 13.2  4.1  240   601   10   SIALIDASE;                                                 "         
  64:  2G8S-A 13.1  3.5  211   347   11   GLUCOSE/SORBOSONE DEHYDROGENASES;                          "         
  65:  1A12-A 13.1  3.8  234   401    9   REGULATOR OF CHROMOSOME CONDENSATION 1;                    "         
  66:  1YR2-A 13.0  8.4  257   680   12   PROLYL OLIGOPEPTIDASE;                                     "         
  67:  2OJH-A 12.9  3.4  214   277   14   UNCHARACTERIZED PROTEIN ATU1656/AGR_C_3050;                "         
  68:  1FLG-A 12.8  4.0  249   582    8   PROTEIN (QUINOPROTEIN ETHANOL DEHYDROGENASE);              "         
  69:  1V0E-A 12.6  4.0  250   666    8   ENDO-ALPHA-SIALIDASE;                                      "         
  70:  1LRW-A 12.5  3.5  241   600    8   METHANOL DEHYDROGENASE SUBUNIT 1;                          "         
  71:  1X2J-A 12.4  3.4  219   290    9   KELCH-LIKE ECH-ASSOCIATED PROTEIN 1;                       "         
  72:  1JTD-B 12.4  4.0  212   273   11   TEM-1 BETA-LACTAMASE;                                      "         
  73:  2BF6-A 12.2  3.9  236   448    8   EXO-ALPHA-SIALIDASE;                                       "         
  74:  1A4G-A 12.1  3.7  236   390    5   NEURAMINIDASE;                                             "         
  75:  1K3I-A 11.8  3.7  269   651    9   GALACTOSE OXIDASE PRECURSOR;                               "         
  76:  1W0O-A 11.6  3.8  238   753   10   SIALIDASE;                                                 "         
  77:  1SLI-A 11.4  3.8  232   679    6   INTRAMOLECULAR TRANS-SIALIDASE;                            "         
  78:  2QE8-A 10.9  3.5  206   336    7   UNCHARACTERIZED PROTEIN;                                   "         
  79:  1NMB-N 10.2  3.8  229   388    7   N9 NEURAMINIDASE;                                          "         
  80:  2A75-A  9.7 13.9  246   632    7   SIALIDASE;                                                 "         
  81:  1E8T-A  9.5  3.9  225   446    7   HEMAGGLUTININ-NEURAMINIDASE;                               "         
  82:  1DIL-A  9.1  3.5  214   381    8   SIALIDASE;                                                 "         
  83:  1Z4V-A  8.8  3.9  209   444    7   HEMAGGLUTININ-NEURAMINIDASE;                               "         
  84:  2GOP-A  8.6  4.3  204   320   11   TRILOBED PROTEASE;                                         "         
  85:  2D5L-A  8.6 10.9  260   665   13   DIPEPTIDYL AMINOPEPTIDASE IV, PUTATIVE;                    "         
  86:  1V2I-A  8.3  3.9  210   431    8   HEMAGGLUTININ-NEURAMINIDASE GLYCOPROTEIN;                  "         
  87:  2FAW-A  7.8  4.1  159   250    9   GLUTAMINE CYCLOTRANSFERASE;                                "         
  88:  2BWM-A  7.2  4.2  237   400    8   PSATHYRELLA VELUTINA LECTIN PVL;                           "         
  89:  1E5T-A  7.1 10.7  206   710    9   PROLYL ENDOPEPTIDASE;                                      "         
  90:  1W18-A  7.0  3.6  191   492    7   LEVANSUCRASE;                                              "         
  91:  2ADD-A  6.8  4.0  194   537    7   FRUCTAN 1-EXOHYDROLASE IIA;                                "         
  92:  1GYH-A  6.8  3.8  196   318    8   ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A;                 "         
  93:  2BKL-A  6.7  4.7  210   676    6   PROLYL ENDOPEPTIDASE;                                      "         
  94:  1Y7B-A  6.7  4.8  210   534    5   BETA-XYLOSIDASE, FAMILY 43 GLYCOSYL HYDROLASE;             "         
  95:  2B4W-A  6.2  3.8  169   292    8   HYPOTHETICAL PROTEIN, CONSERVED;                           "         
  96:  1UYP-A  6.2  3.9  185   432    7   BETA-FRUCTOSIDASE;                                         "         
  97:  1TL2-A  5.8  3.8  179   235   10   PROTEIN (TACHYLECTIN-2);                                   "         
  98:  1OYG-A  4.9  4.0  182   440    4   LEVANSUCRASE;                                              "         
  99:  2H2N-A  4.6  3.8  156   317    9   SOLUBLE CALCIUM-ACTIVATED NUCLEOTIDASE 1;                  "         
 100:  1ITV-A  4.6  4.0  135   195    4   MMP9;                                                      "         
 101:  1VKD-A  4.5  3.7  164   327    5   CONSERVED HYPOTHETICAL PROTEIN TM1225;                     "         
 102:  1XFD-A  4.3 16.0  183   723   13   DIPEPTIDYL AMINOPEPTIDASE-LIKE PROTEIN 6;                  "         
 103:  1N7V-A  3.7  4.0  147   533    8   ADSORPTION PROTEIN P2;                                     "         
 104:  1J2E-A  3.7 12.7  222   729   10   DIPEPTIDYL PEPTIDASE IV;                                   "         
 105:  1H10-A  3.4  3.7   54   117    7   RAC-ALPHA SERINE/THREONINE KINASE;                         "         
 106:  2BS5-A  3.3  3.0   81    90    9   LECTIN;                                                    "         
 107:  1Y4W-A  3.2  4.5  189   517    6   EXO-INULINASE;                                             "         
 108:  1WJM-A  2.7  3.3   53   123    4   BETA-SPECTRIN III;                                         "         
 109:  1SUU-A  2.4  3.3  105   293    9   DNA GYRASE SUBUNIT A;                                      "         
 110:  1ZI0-A  2.3  3.2  113   287   12   DNA GYRASE SUBUNIT A;                                      "         
 111:  1V57-A  2.3 12.6  107   229    4   THIOL:DISULFIDE INTERCHANGE PROTEIN DSBG;                  "         
-

No 1: 1NR0A  MOLECULE: ACTIN INTERACTING PROTEIN 1;                               

DSSP  LLLEEEEEELLLLLLLLLLLLLLEELLLLLEEEEEELLEEEEEELLLLLLLEEELLLLLL
Query SEFSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQ   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct SEFSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQ   60
DSSP  LLLEEEEEELLLLLLLLLLLLLLEELLLLLEEEEEELLEEEEEELLLLLLLEEELLLLLL


DSSP  EEEEEELLLLLEEEEEELLLEEEEEELLLLLLLEEEEEELLLLLEEEEEELLLLLEEEEE
Query TTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAV  120
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct TTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAV  120
DSSP  EEEEEELLLLLEEEEEELLLEEEEEELLLLLLLEEEEEELLLLLEEEEEELLLLLEEEEE


DSSP  ELLLLLLEEEEELLLLLLLLLLLLLLLLEEEEEELLLLLLEEEEEELLLLEEEEELLLLE
Query GEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK  180
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct GEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK  180
DSSP  ELLLLLLEEEEELLLLLLLLLLLLLLLLEEEEEELLLLLLEEEEEELLLLEEEEELLLLE


DSSP  EEEEELLLLLLEEEEEELLLLLEEEEEELLLLEEEEELLLLLEEEEELLLLLLLLLLLLL
Query FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS  240
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS  240
DSSP  EEEEELLLLLLEEEEEELLLLLEEEEEELLLLEEEEELLLLLEEEELLLLLLLLLLLLLL


DSSP  EEEEEELLLLLEEEEEELLLEEEEEELLLLEEEEEEELLLLHHHLEEEEEEELLEEEEEE
Query VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS  300
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS  300
DSSP  EEEEEELLLLLEEEEEELLLEEEEEELLLLEEEEEEELLLLHHHLEEEEEELLLLEEEEE


DSSP  LLLLEEEEELLLLEEEEEELLLLLLEEEEEELLLLLEEEEEELLLLEEEEELLLLLEEEL
Query ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV  360
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV  360
DSSP  LLLLEEEEELLLLEEEEEELLLLLLEEEEEELLLLLEEEEEELLLLEEEEELLLLLEEEL


DSSP  LLLLLLLLEEEEEELLLLLEEEEELLLEEEEELLLLLLLLHHHLEEEELLLLEEEEEELL
Query FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSA  420
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSA  420
DSSP  LLLLLLLLEEEEEELLLLLEEEEELLLEEEEELLLLLLLLLLLLLEEELLLLEEEEEELL


DSSP  LLLLEEEEELLEEEEEELLEEEEEELLLLEEEEEELLLLLEEEEEELLLEEEEEEEELLE
Query DGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS  480
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct DGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS  480
DSSP  LLLLEEEEELLEEEEEELLEEEEEELLLLEEEEEELLLLLEEEEEELLLEEEEEEEELLE


DSSP  EEEEEEEELLLLEEEEEELLLLLEEEEEELLLLEEEEEHHHLLEELLLLLLLLLLLLEEE
Query VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVAC  540
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVAC  540
DSSP  EEEEEEEELLLLEEEEEELLLLLEEEEEELLLLEEEEEHHHLLEELLLLLLLLLLLLEEE


DSSP  EEELLLLLEEEEEELLLLEEEEELLLLLLLLEEELLLLLLLLEEEEEEEELLEEEEEELL
Query VSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD  600
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct VSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD  600
DSSP  EEELLLLLEEEEEELLLLEEEEELLLLLLLLEEELLLLLLLLEEEEEEEELLEEEEEELL


DSSP  LLEEEEELLL
Query SNIKFWNVPF  610
ident ||||||||||
Sbjct SNIKFWNVPF  610
DSSP  LLEEEEELLL


No 2: 1PGUA  MOLECULE: ACTIN INTERACTING PROTEIN 1;                               

DSSP  LLLEEEEEELLLLLLLLLLLLLLEELLLLLEEEEEELLEEEEEELLL....llLLEEELL
Query SEFSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGS....ltDTEIYTE   56
ident |  |     |  | | |     |   |    | |  | |                   | 
Sbjct SSISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDgdskvpPVVQFTG   60
DSSP  LLEEEEEEELLLLLLLLLLLLLLEEELLLLEEEEEELLEEEEEELLLllllllLEEEELL


DSSP  LL.LLEEEEEELLL..LLEEEEEELLLEEEEEELLL......LLLLEEEEEELLLLLEEE
Query HS.HQTTVAKTSPS..GYYCASGDVHGNVRIWDTTQ......TTHILKTTIPVFSGPVKD  107
ident |     |  | ||     |  |||  | |  |  |            |    |  ||  |
Sbjct HGsSVVTTVKFSPIkgSQYLCSGDESGKVIVWGWTFdkesnsVEVNVKSEFQVLAGPISD  120
DSSP  LLlLLEEEEEELLLllLLEEEEEELLLEEEEEEEEEehhhleEEEEEEEEEELLLLLEEE


DSSP  EEELLLLLEEEEEELLLLLLEEEEELLLLLLLLLLLLLLLLEEEEEELLLLLLEEEEEEL
Query ISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSD  167
ident |||| |  |   |||||  ||     | | | |   |     |    | ||| |     |
Sbjct ISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPXRSXTVGD  180
DSSP  EEELLLLLEEEEEELLLLLLEEEEELLLLLEEEELLLLLLLEEEEEELLLLLLEEEEEEL


DSSP  LLLEEEEELLLLEEEEEE.LLLL..LLEEEEEELLL.LLEEEEEELLLLEEEEELLLLLE
Query DNTVAIFEGPPFKFKSTF.GEHT..KFVHSVRYNPD.GSLFASTGGDGTIVLYNGVDGTK  223
ident |  |    ||||||       |    ||  |   || |      | |  |    |  |  
Sbjct DGSVVFYQGPPFKFSASDrTHHKqgSFVRDVEFSPDsGEFVITVGSDRKISCFDGKSGEF  240
DSSP  LLEEEEEELLLLEEEEEElLLLLllLLEEEEEELLLlLLEEEEEELLLLEEEEELLLLLE


DSSP  EEEELLLLLLlllLLLLEEEEEELLlLLEEEEEELLLEEEEEELLLLEEEEEEELLL.LH
Query TGVFEDDSLKnvaHSGSVFGLTWSPdGTKIASASADKTIKIWNVATLKVEKTIPVGT.RI  282
ident     |||        |  | | |     | |   || ||  | | | |            
Sbjct LKYIEDDQEP...VQGGIFALSWLD.SQKFATVGADATIRVWDVTTSKCVQKWTLDKqQL  296
DSSP  EEELLLLLLL...LLLLEEEEEELL.LLEEEEEELLLEEEEEELLLLEEEEEEELLLlLH


DSSP  HHLEEEEEEELL.EEEEEELLLLEEEEELLLLEEEEEELLLLLLEEEEEELllllEEEEE
Query EDQQLGIIWTKQ.ALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSadgkTLFSA  341
ident   || |   |      | |  |  ||             |||| ||||        | | 
Sbjct GNQQVGVVATGNgRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVN....PLISG  352
DSSP  HHLEEEEEEEELlEEEEEELLLLEEEEELLEEEEEEEELLLLLLEEEEELL....LLEEE


DSSP  ELLLLEEEEEllllLEEELllLLLLLLEEEEEELLLLLEEEEELLLEEEEEllllllllh
Query DAEGHINSWDistgISNRVfpDVHATMITGIKTTSKGDLFTVSWDDHLKVVpaggsgvds  401
ident    | |  |      |       |   |              |||| |||          
Sbjct SYDGRIXEWS....SSSXH..QDHSNLIVSLDNSKAQEYSSISWDDTLKVN.........  397
DSSP  ELLLLEEELL....LLEEE..LLLLLLEEEEELLLLLLLEEEELLLEEEEL.........


DSSP  hhLEEEELLLLEEEEEELLLLlLEEEEEL.LEEEEEE..LLEE.EEEELLLLEEEEEELl
Query skAVANKLSSQPLGLAVSADGdIAVAACY.KHIAIYS..HGKL.TEVPISYNSSCVALSn  457
ident          |||       ||             |     |     |      | | || 
Sbjct .gITKHEFGSQPKVASANNDG.FTAVLTNdDDLLILQsfTGDIiKSVRLNSPGSAVSLS.  454
DSSP  .lEEEEELLLLEEEEEELLLL.EEEEEELlLEEEEEEllLLLEeEEEELLLLEEEEEEL.


DSSP  lLLEEEEEELL.LEEEEEEEEllEEEEEEEE..ELLLLEEEEEELLLLLEEEEEELLLLE
Query dKQFVAVGGQD.SKVHVYKLSgaSVSEVKTI..VHPAEITSVAFSNNGAFLVATDQSRKV  514
ident     ||||        | |||               |       |       | |   | 
Sbjct .QNYVAVGLEEgNTIQVFKLS..DLEVSFDLktPLRAKPSYISISPSETYIAAGDVXGKI  511
DSSP  .LLEEEEEELLlLLEEEEELL..EEEEEEELllLLLLLEEEEEELLLLLEEEEEELLLLE


DSSP  EEEEHHhLLEELLLLLLLlLLLLEEEEEELLL....LLEEEEEELLLLEEEEELLLLlLL
Query IPYSVAnNFELAHTNSWTfHTAKVACVSWSPD....NVRLATGSLDNSVIVWNMNKPsDH  570
ident   |      |          | |    || |         ||||||          |   
Sbjct LLYDLQ.SREVKTSRWAF.RTSKINAISWKPAeeieEDLVATGSLDTNIFIYSVKRP.XK  568
DSSP  EEEELL.LLEEEELLLLL.LLLLEEEEEELLLllllLLEEEEEELLLLEEEEELLLL.LL


DSSP  LEEELLLLLlLLEEEEEEEELLEEEEEELLLLEEEEELLl
Query PIIIKGAHAmSSVNSVIWLNETTIVSAGQDSNIKFWNVPf  610
ident  |    ||    ||   |    | || | |  || |||  
Sbjct IIKALNAHK.DGVNNLLWETPSTLVSSGADACIKRWNVV.  606
DSSP  LEEELLLLL.LLEEEEEEEELLEEEEEELLLLEEEEEEL.


No 3: 1ERJA  MOLECULE: TRANSCRIPTIONAL REPRESSOR TUP1;                            

DSSP  .................................................llleeeeeeLL
Query .................................................sefsqtalfPS   11
ident                                                             
Sbjct hylvpynqranhskpippflldldsqsvpdalkkqtndyyilynpalpreidvelhksLD   60
DSSP  lllllllllllllllllhhhhllllllllllleeelllleeeellllllleeeeeeeeEE


DSSP  LLLLlllllLLLEELLLLLEEEEEELLEEEEEELLLLLLLEEELL.lLLLEEEEEELLLL
Query LPRTargtaVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTE.hSHQTTVAKTSPSG   70
ident                  |               |                      || |
Sbjct HTSV....vCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDssDLYIRSVCFSPDG  116
DSSP  LLLL....lLEEEELLLLLEEEEELLLLEEEEELLLLLEEEEELLllLLLEEEEEELLLL


DSSP  LEEEEEELLLEEEEEELLLllLLEEEEEELLLLLEEEEEELLLLLEEEEEELLllLLEEE
Query YYCASGDVHGNVRIWDTTQttHILKTTIPVFSGPVKDISWDSESKRIAAVGEGreRFGHV  130
ident    | |      ||||                                       |    
Sbjct KFLATGAEDRLIRIWDIEN..RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD..RTVRI  172
DSSP  LEEEEEELLLLEEEEELLL..LEEEEEELLLLLLEEEEEELLLLLEEEEEELL..LEEEE


DSSP  EELLLLLLLLLLLlLLLLEEEEEELLLLLLEEEEEELLLLEEEEELLLLEEEEEEL.LLL
Query FLFDTGTSNGNLTgQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG.EHT  189
ident     ||     |         |   |     |  || |  |                 | 
Sbjct WDLRTGQCSLTLS.IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDtGHK  231
DSSP  EELLLLEEEEEEE.LLLLEEEEEELLLLLLEEEEEELLLLEEEEELLLLLEEEEELlLLL


DSSP  LLEEEEEELLLLLEEEEEELLLLEEEEElllLLEEEEELlllllllLLLLLEEEEEELLL
Query KFVHSVRYNPDGSLFASTGGDGTIVLYNgvdGTKTGVFEddslknvAHSGSVFGLTWSPD  249
ident   | ||    ||    |   |    | |    |              |   |        
Sbjct DSVYSVVFTRDGQSVVSGSLDRSVKLWN...LTCEVTYI.......GHKDFVLSVATTQN  281
DSSP  LLEEEEEELLLLLEEEEEELLLEEEEEE...LLEEEEEE.......LLLLLEEEEEELHH


DSSP  LLEEEEEELLLEEEEEELLLLEEEEEEELLllhHHLEEEEEEELL........EEEEEEL
Query GTKIASASADKTIKIWNVATLKVEKTIPVGtriEDQQLGIIWTKQ........ALVSISA  301
ident    | | | |     |                                          | 
Sbjct DEYILSGSKDRGVLFWDKKSGNPLLMLQGH...RNSVISVAVANGsslgpeynVFATGSG  338
DSSP  HLEEEEEELLLEEEEEELLLLLEEEEEELL...LLLEEEEEELLLllllllleEEEEEEL


DSSP  LLLEEEEELLLleeeeeelllllleeeeeellllleeeeeelllleeeeellllleeell
Query NGFINFVNPELgsidqvryghnkaitalsssadgktlfsadaeghinswdistgisnrvf  361
ident                                                             
Sbjct DCKARIWKYKK.................................................  349
DSSP  LLEEEEEEEEE.................................................


DSSP  llllllleeeeeellllleeeeellleeeeellllllllhhhleeeelllleeeeeelll
Query pdvhatmitgikttskgdlftvswddhlkvvpaggsgvdsskavanklssqplglavsad  421
ident                                                             
Sbjct ............................................................  349
DSSP  ............................................................


DSSP  llleeeeelleeeeeelleeeeeelllleeeeeellllleeeeeellleeeeeeeellee
Query gdiavaacykhiaiyshgkltevpisynsscvalsndkqfvavggqdskvhvyklsgasv  481
ident                                                             
Sbjct ............................................................  349
DSSP  ............................................................


DSSP  eeeeeeelllleeeeeellllleeeeeelllleeeeehhhlleelllllllllllleeee
Query sevktivhpaeitsvafsnngaflvatdqsrkvipysvannfelahtnswtfhtakvacv  541
ident                                                             
Sbjct ............................................................  349
DSSP  ............................................................


DSSP  eellllleeeeeelllleeeeelllllllleeelllllllleeeeeeeelleeeeeelll
Query swspdnvrlatgsldnsvivwnmnkpsdhpiiikgahamssvnsviwlnettivsagqds  601
ident                                                             
Sbjct ............................................................  349
DSSP  ............................................................


DSSP  leeeeelll
Query nikfwnvpf  610
ident          
Sbjct ........i  350
DSSP  ........l


No 4: 2HESX  MOLECULE: YDR267CP;                                                  

DSSP  llleeeeeeLLLLLLlllllLLLEELLllLEEEEEE.LLEEEEEELL..LLLLLEEEL..
Query sefsqtalfPSLPRTargtaVVLGNTPagDKIQYCN.GTSVYTVPVG..SLTDTEIYT..   55
ident                                            | |     |        
Sbjct sinlikslkLYKEKI.....WSFDFSQ..GILATGStDRKIKLVSVKydDFTLIDVLDet   53
DSSP  lleeeeeeeLLLLLE.....EEEEEEL..LEEEEEElLLLEEEEELLllLLEEEEEELll


DSSP  LLLLLEEEEEELLLLLEEEEEELLLEEEEEeLLLLlLLEEEEEEllllLEEEEEELLLLL
Query EHSHQTTVAKTSPSGYYCASGDVHGNVRIWdTTQTtHILKTTIPvfsgPVKDISWDSESK  115
ident  |          |     | |     | ||        |   |      ||   |     
Sbjct AHKKAIRSVAWRPHTSLLAAGSFDSTVSIW.AKFE.MDLLAIIE....EVKGVAWSNDGY  107
DSSP  LLLLLEEEEEELLLLLEEEEEELLLLEEEE.ELLL.LEEEEEEL....LEEEEEELLLLL


DSSP  EEEEEELLllLLEEEEEL....LLLLLLLLLLLLLLLEEEEEELLLLlLEEEEEELLLLE
Query RIAAVGEGreRFGHVFLF....DTGTSNGNLTGQARAMNSVDFKPSRpFRIISGSDDNTV  171
ident   |                           |         |   ||      | | | ||
Sbjct YLATCSRD..KSVWIWETdesgEEYECISVLQEHSQDVKHVIWHPSE.ALLASSSYDDTV  164
DSSP  EEEEEELL..LLEEEEELllllLLLEEEEEELLLLLLEEEEEELLLL.LEEEEEELLLLE


DSSP  EEEEL..LLLEEEEEELLLLLLEEEEEELLL..lLEEEEEELLLLEEEEEL........l
Query AIFEG..PPFKFKSTFGEHTKFVHSVRYNPD..gSLFASTGGDGTIVLYNG........v  219
ident  |                |   | |             |   | |               
Sbjct RIWKDydDDWECVAVLNGHEGTVWSSDFDKTegvFRLCSGSDDSTVRVWKYmgddeddqq  224
DSSP  EEEEEelLEEEEEEEELLLLLLEEEEEELLLlllLEEEEEELLLLEEEEEEeeellllle


DSSP  LLLEEEEELLllllllLLLLLEEEEEELLLLlEEEEEELLLEEEEEELL..LLEEEEEEE
Query DGTKTGVFEDdslknvAHSGSVFGLTWSPDGtKIASASADKTIKIWNVA..TLKVEKTIP  277
ident          |       |   |    |   |  |||  ||             ||     
Sbjct EWVCEAILPD......VHKRQVYNVAWGFNG.LIASVGADGVLAVYEEVdgEWKVFAKRA  277
DSSP  EEEEEEELLL......LLLLLEEEEEELLLL.LEEEEELLLLEEEEEEEllEEEEEEEEL


DSSP  .LLLLhhHLEEEEEEElLEEEEEELLLLEEEEELllleeeeeelllllleeeeeelllll
Query .VGTRieDQQLGIIWTkQALVSISANGFINFVNPelgsidqvryghnkaitalsssadgk  336
ident               |    |      |  ||                             
Sbjct lCHGV..YEINVVKWL.TILATGGDDGIVNFWSL..........................  308
DSSP  lLLLL..LLEEEEEEL.LLEEEEELLLEEEEEEL..........................


DSSP  eeeeeelllleeeeellllleeellllllllleeeeeellllleeeeellleeeeellll
Query tlfsadaeghinswdistgisnrvfpdvhatmitgikttskgdlftvswddhlkvvpagg  396
ident                                                             
Sbjct ............................................................  308
DSSP  ............................................................


DSSP  llllhhhleeeelllleeeeeelllllleeeeelleeeeeelleeeeeelllleeeeeel
Query sgvdsskavanklssqplglavsadgdiavaacykhiaiyshgkltevpisynsscvals  456
ident                                                             
Sbjct ............................................................  308
DSSP  ............................................................


DSSP  lllleeeeeellleeeeeeeelleeeeeeeeelllleeeeeellllleeeeeelllleee
Query ndkqfvavggqdskvhvyklsgasvsevktivhpaeitsvafsnngaflvatdqsrkvip  516
ident                                                             
Sbjct ............................................................  308
DSSP  ............................................................


DSSP  eehhhlleelllllllllllleeeeeellllleeeeeelllleeeeelllllllleeell
Query ysvannfelahtnswtfhtakvacvswspdnvrlatgsldnsvivwnmnkpsdhpiiikg  576
ident                                                             
Sbjct ............................................................  308
DSSP  ............................................................


DSSP  lllllleeeeeeeelleeeeeelllleeeeelll
Query ahamssvnsviwlnettivsagqdsnikfwnvpf  610
ident                                   
Sbjct ..................................  308
DSSP  ..................................


No 5: 2GNQA  MOLECULE: WD-REPEAT PROTEIN 5;                                       

DSSP  ..............llleeeeeeLLLLLLlllllLLLEELLLLLEEEEEE.LLEEEEEEL
Query ..............sefsqtalfPSLPRTargtaVVLGNTPAGDKIQYCN.GTSVYTVPV   45
ident                                         | |                 
Sbjct eaaraqptkptpvkpnyalkftlAGHTKA....vSSVKFSPNGEWLASSSaDKLIKIWGA   56
DSSP  llhhhlllllllllllleeeeeeLLLLLL....eEEEEELLLLLEEEEEElLLEEEEEEL


DSSP  LLLLLLEEELLLLLLEEEEEELLLLLEEEEEELLLEEEEEELLLllLLEEEEEELLLLLE
Query GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQttHILKTTIPVFSGPV  105
ident            |         |       |        |||          |    |  |
Sbjct YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS..GKCLKTLKGHSNYV  114
DSSP  LLLLEEEEEELLLLLEEEEEELLLLLEEEEEELLLEEEEEELLL..LLEEEEEELLLLLE


DSSP  EEEEELLLLLEEEEEELLllLLEEEEELLLLLLLLLLLLLLLLEEEEEELLLllLEEEEE
Query KDISWDSESKRIAAVGEGreRFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSrpFRIISG  165
ident         |  |                 ||     |         | |       | | 
Sbjct FCCNFNPQSNLIVSGSFD..ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD.gSLIVSS  171
DSSP  EEEEELLLLLEEEEEELL..LLEEEEELLLLLEEEEELLLLLLEEEEEELLL.lLEEEEE


DSSP  ELLLLEEEEELLLLEEEEEELL.lLLLEEEEEELLLLLEEEEEELLLLEEEEELLLLLEE
Query SDDNTVAIFEGPPFKFKSTFGE.hTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT  224
ident | |    |          |        |  |   | |        | |  |     |   
Sbjct SYDGLCRIWDTASGQCLKTLIDddNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL  231
DSSP  ELLLLEEEEELLLLLEEEEELLllLLLEEEEEELLLLLEEEEEELLLEEEEEELLLLEEE


DSSP  EEELlllllllLLLLL..eEEEEELLL.lLEEEEEELLLEEEEEELLLLEEEEEEELLll
Query GVFEddslknvAHSGS..vFGLTWSPD.gTKIASASADKTIKIWNVATLKVEKTIPVGtr  281
ident             |           |      | | | |    |||  |            
Sbjct KTYT.......GHKNEkycIFANFSVTggKWIVSGSEDNLVYIWNLQTKEIVQKLQGH..  282
DSSP  EEEL.......LLLLLlllLLEEEELLllLEEEELLLLLLEEEEELLLLLEEEEELLL..


DSSP  hHHLEEEEEEELL..EEEEEEL..LLLEEEEELLLleeeeeelllllleeeeeellllle
Query iEDQQLGIIWTKQ..ALVSISA..NGFINFVNPELgsidqvryghnkaitalsssadgkt  337
ident   |               |        |                                
Sbjct .TDVVISTACHPTenIIASAALenDKTIKLWKSDC.........................  316
DSSP  .LLLEEEEEELLLllEEEEEELllLLLEEEEELLL.........................


DSSP  eeeeelllleeeeellllleeellllllllleeeeeellllleeeeellleeeeelllll
Query lfsadaeghinswdistgisnrvfpdvhatmitgikttskgdlftvswddhlkvvpaggs  397
ident                                                             
Sbjct ............................................................  316
DSSP  ............................................................


DSSP  lllhhhleeeelllleeeeeelllllleeeeelleeeeeelleeeeeelllleeeeeell
Query gvdsskavanklssqplglavsadgdiavaacykhiaiyshgkltevpisynsscvalsn  457
ident                                                             
Sbjct ............................................................  316
DSSP  ............................................................


DSSP  llleeeeeellleeeeeeeelleeeeeeeeelllleeeeeellllleeeeeelllleeee
Query dkqfvavggqdskvhvyklsgasvsevktivhpaeitsvafsnngaflvatdqsrkvipy  517
ident                                                             
Sbjct ............................................................  316
DSSP  ............................................................


DSSP  ehhhlleelllllllllllleeeeeellllleeeeeelllleeeeelllllllleeelll
Query svannfelahtnswtfhtakvacvswspdnvrlatgsldnsvivwnmnkpsdhpiiikga  577
ident                                                             
Sbjct ............................................................  316
DSSP  ............................................................


DSSP  llllleeeeeeeelleeeeeelllleeeeelll
Query hamssvnsviwlnettivsagqdsnikfwnvpf  610
ident                                  
Sbjct .................................  316
DSSP  .................................


No 6: 1VYHC  MOLECULE: PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB              

DSSP  ....llleeeeeeLLLLLLlllllLLLEELLLLLEEEEEE.LLEEEEEELLLLLLLEEEL
Query ....sefsqtalfPSLPRTargtaVVLGNTPAGDKIQYCN.GTSVYTVPVGSLTDTEIYT   55
ident                               |                             
Sbjct kewiprppekyalSGHRSP....vTRVIFHPVFSVMVSASeDATIKVWDYETGDFERTLK   56
DSSP  llllllllllleeELLLLL....eEEEEELLLLLEEEEEElLLLEEEEELLLLLLLEEEL


DSSP  LLLLLEEEEEELLLLLEEEEEELLLEEEEEELLLllLLEEEEEELLLLLEEEEEELLLLL
Query EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQttHILKTTIPVFSGPVKDISWDSESK  115
ident  |           ||   ||         ||          |       |   |      
Sbjct GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG..FECIRTMHGHDHNVSSVSIMPNGD  114
DSSP  LLLLLEEEEEELLLLLEEEEEELLLLLLEEELLL..LLEEELLLLLLLLEEEEEELLLLL


DSSP  EEEEEELLllLLEEEEELLLLLLLLLLLLLLLLEEEEEELLLLlLEEEEEELLLLEEEEE
Query RIAAVGEGreRFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRpFRIISGSDDNTVAIFE  175
ident  |                 ||      ||       |         | | | | ||    
Sbjct HIVSASRD..KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG.TLIASCSNDQTVRVWV  171
DSSP  EEEEEELL..LEEEEEELLLLLEEEEEELLLLLEEEEEELLLL.LEEEEEELLLLEEEEE


DSSP  LLLLEEEEEELLLLLLEEEEEELLL.............lLEEEEEELLLLEEEEELLLLL
Query GPPFKFKSTFGEHTKFVHSVRYNPD.............gSLFASTGGDGTIVLYNGVDGT  222
ident       |    ||   |      |                   |   | ||       | 
Sbjct VATKECKAELREHRHVVECISWAPEssyssiseatgsegPFLLSGSRDKTIKMWDVSTGM  231
DSSP  LLLLLEEEEELLLLLLEEEEEELLLlhhhhhhhllllllLEEEEEELLLEEEEEELLLLE


DSSP  EEEEELlllllllLLLLLEEEEEELLLLLEEEEEELLLEEEEEELLLLEEEEEEELlllh
Query KTGVFEddslknvAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVgtri  282
ident               |   | |      |  | |   |||   |        ||       
Sbjct CLMTLV.......GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA...h  281
DSSP  EEEEEE.......LLLLLEEEEEELLLLLLEEEEELLLEEEEELLLLLLLLEEEEL...l


DSSP  HHLEEEEEEELL..EEEEEELLLLEEEEElllleeeeeelllllleeeeeellllleeee
Query EDQQLGIIWTKQ..ALVSISANGFINFVNpelgsidqvryghnkaitalsssadgktlfs  340
ident |         |     |  |                                        
Sbjct EHFVTSLDFHKTapYVVTGSVDQTVKVWE...............................  310
DSSP  LLLEEEEEELLLllLEEEEELLLEEEEEL...............................


DSSP  eelllleeeeellllleeellllllllleeeeeellllleeeeellleeeeellllllll
Query adaeghinswdistgisnrvfpdvhatmitgikttskgdlftvswddhlkvvpaggsgvd  400
ident                                                             
Sbjct ............................................................  310
DSSP  ............................................................


DSSP  hhhleeeelllleeeeeelllllleeeeelleeeeeelleeeeeelllleeeeeelllll
Query sskavanklssqplglavsadgdiavaacykhiaiyshgkltevpisynsscvalsndkq  460
ident                                                             
Sbjct ............................................................  310
DSSP  ............................................................


DSSP  eeeeeellleeeeeeeelleeeeeeeeelllleeeeeellllleeeeeelllleeeeehh
Query fvavggqdskvhvyklsgasvsevktivhpaeitsvafsnngaflvatdqsrkvipysva  520
ident                                                             
Sbjct ............................................................  310
DSSP  ............................................................


DSSP  hlleelllllllllllleeeeeellllleeeeeelllleeeeelllllllleeellllll
Query nnfelahtnswtfhtakvacvswspdnvrlatgsldnsvivwnmnkpsdhpiiikgaham  580
ident                                                             
Sbjct ............................................................  310
DSSP  ............................................................


DSSP  lleeeeeeeelleeeeeelllleeeeelll
Query ssvnsviwlnettivsagqdsnikfwnvpf  610
ident                               
Sbjct ..............................  310
DSSP  ..............................


No 7: 1B9XA  MOLECULE: PROTEIN (TRANSDUCIN);                                      

DSSP  ...........................................llleeeeeELLLLLLll
Query ...........................................sefsqtalFPSLPRTar   17
ident                                                       |     
Sbjct mseldqlrqeaeqlknqirdarkacadatlsqitnnidpvgriqmrtrrtlRGHLAKI..   58
DSSP  llllllhhhhhhhhhhhhhhhhhllllllhhhhllllllllllllleeeeeLLLLLLE..


DSSP  lllLLLEELLLLLEEEEEE.LLEEEEEELLLLLLLEEELLLLLLEEEEEELLLLLEEEEE
Query gtaVVLGNTPAGDKIQYCN.GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASG   76
ident                                          |         ||| | | |
Sbjct ...YAMHWGTDSRLLLSASqDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACG  115
DSSP  ...EEEEELLLLLEEEEEElLLEEEEEELLLLEEEEEEELLLLLEEEEEELLLLLEEEEE


DSSP  ELLLEEEEEELLLLLL..LEEEEEELLLLLEEEEEELlLLLEEEEEELLllLLEEEEELL
Query DVHGNVRIWDTTQTTH..ILKTTIPVFSGPVKDISWDsESKRIAAVGEGreRFGHVFLFD  134
ident        |                    |             |                 
Sbjct GLDNICSIYNLKTREGnvRVSRELAGHTGYLSCCRFL.DDNQIVTSSGD..TTCALWDIE  172
DSSP  ELLLLEEEEELLLLLLllLLLEEELLLLLLEEEEEEE.ELLEEEEEELL..LLEEEEELL


DSSP  LLLLLLLLLLLLLLEEEEEELLLllLEEEEEELLLLEEEEELLLLEEEEEELLLLLLEEE
Query TGTSNGNLTGQARAMNSVDFKPSrpFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS  194
ident ||      ||      |    |       ||  |               ||  |      
Sbjct TGQQTTTFTGHTGDVMSLSLAPD.tRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA  231
DSSP  LLEEEEEELLLLLLEEEEEELLL.lLEEEEEELLLEEEEEELLLLEEEEEEELLLLLEEE


DSSP  EEELLLLLEEEEEELLLLEEEEELLLLLEEEEELLLLlllllLLLLEEEEEELLLLLEEE
Query VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSlknvaHSGSVFGLTWSPDGTKIA  254
ident     | |  ||    | |  |              |                |  |    
Sbjct ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN.....IICGITSVSFSKSGRLLL  286
DSSP  EEELLLLLEEEEEELLLLEEEEELLLLEEEEEELLLL.....LLLLEEEEEELLLLLEEE


DSSP  EEELLLEEEEEELLLLEEEEE.EELLllhhHLEEEEEEEL..LEEEEEELLLLEEEEEll
Query SASADKTIKIWNVATLKVEKT.IPVGtrieDQQLGIIWTK..QALVSISANGFINFVNpe  311
ident     |     |                           |    |    |   |    |  
Sbjct AGYDDFNCNVWDALKADRAGVlAGHD....NRVSCLGVTDdgMAVATGSWDSFLKIWN..  340
DSSP  EEELLLLEEEEELLLLLEEEEeHHHL....LLLLEEEELLllLLEEEELLLLLEEEEL..


DSSP  lleeeeeelllllleeeeeellllleeeeeelllleeeeellllleeellllllllleee
Query lgsidqvryghnkaitalsssadgktlfsadaeghinswdistgisnrvfpdvhatmitg  371
ident                                                             
Sbjct ............................................................  340
DSSP  ............................................................


DSSP  eeellllleeeeellleeeeellllllllhhhleeeelllleeeeeelllllleeeeell
Query ikttskgdlftvswddhlkvvpaggsgvdsskavanklssqplglavsadgdiavaacyk  431
ident                                                             
Sbjct ............................................................  340
DSSP  ............................................................


DSSP  eeeeeelleeeeeelllleeeeeellllleeeeeellleeeeeeeelleeeeeeeeelll
Query hiaiyshgkltevpisynsscvalsndkqfvavggqdskvhvyklsgasvsevktivhpa  491
ident                                                             
Sbjct ............................................................  340
DSSP  ............................................................


DSSP  leeeeeellllleeeeeelllleeeeehhhlleelllllllllllleeeeeellllleee
Query eitsvafsnngaflvatdqsrkvipysvannfelahtnswtfhtakvacvswspdnvrla  551
ident                                                             
Sbjct ............................................................  340
DSSP  ............................................................


DSSP  eeelllleeeeelllllllleeelllllllleeeeeeeelleeeeeelllleeeeelll
Query tgsldnsvivwnmnkpsdhpiiikgahamssvnsviwlnettivsagqdsnikfwnvpf  610
ident                                                            
Sbjct ...........................................................  340
DSSP  ...........................................................


No 8: 1L0QA  MOLECULE: SURFACE LAYER PROTEIN;                                     

DSSP  llleeeeeelllllllllllllleellllLEEEEEE..LLEEEEEELLLLLLLEEELLLl
Query sefsqtalfpslprtargtavvlgntpagDKIQYCN..GTSVYTVPVGSLTDTEIYTEHs   58
ident                                    |          | |   |       
Sbjct ............................sTFAYIANseSDNISVIDVTSNKVTATIPVG.   31
DSSP  ............................lEEEEEEEllLLEEEEEELLLLEEEEEEELL.


DSSP  LLEEEEEELLLLLEEEEEEL.LLEEEEEELLLllLLEEEEEELLlLLEEEEEELLLLLEE
Query HQTTVAKTSPSGYYCASGDV.HGNVRIWDTTQttHILKTTIPVFsGPVKDISWDSESKRI  117
ident      |  || |            | | ||         | |               |  
Sbjct SNPXGAVISPDGTKVYVANAhSNDVSIIDTAT..NNVIATVPAG.SSPQGVAVSPDGKQV   88
DSSP  LLEEEEEELLLLLEEEEEEHhHLEEEEEELLL..LEEEEEEELL.LLEEEEEELLLLLEE


DSSP  EEEELLlLLLEEEEELLLLLLLLLLLLLlLLEEEEEELLLLlLEEEEEE.LLLLEEEEEL
Query AAVGEGrERFGHVFLFDTGTSNGNLTGQaRAMNSVDFKPSRpFRIISGS.DDNTVAIFEG  176
ident             |      |  |               |            | ||     
Sbjct YVTNXA.SSTLSVIDTTSNTVAGTVKTG.KSPLGLALSPDG.KKLYVTNnGDKTVSVINT  145
DSSP  EEEELL.LLEEEEEELLLLEEEEEEELL.LLEEEEEELLLL.LEEEEEElLLLEEEEEEL


DSSP  LLLEEEEEELLLlLLEEEEEELLLLLEEEEEEL.LLLEEEEELLLLLEEEEElllllllL
Query PPFKFKSTFGEHtKFVHSVRYNPDGSLFASTGG.DGTIVLYNGVDGTKTGVFeddslknV  235
ident        |              |||            |     |                
Sbjct VTKAVINTVSVG.RSPKGIAVTPDGTKVYVANFdSXSISVIDTVTNSVIDTV.......K  197
DSSP  LLLEEEEEEELL.LLEEEEEELLLLLEEEEEELlLLEEEEEELLLLEEEEEE.......E


DSSP  LLLlLEEEEEELLLLLEEEEEELL...LEEEEEELLLLEEEEEEELlllhHHLEEEEEEE
Query AHSgSVFGLTWSPDGTKIASASAD...KTIKIWNVATLKVEKTIPVgtriEDQQLGIIWT  292
ident        |    | |||      |    |       | |    |||         ||  |
Sbjct VEA.APSGIAVNPEGTKAYVTNVDkyfNTVSXIDTGTNKITARIPV....GPDPAGIAVT  252
DSSP  LLL.EEEEEEELLLLLEEEEEEELlllLEEEEEELLLLEEEEEEEL....LLLEEEEEEL


DSSP  LL..EEEEEE.LLLLEEEEELLLLEEEEEELLLLlleeeeeellllleeeeeelllleee
Query KQ..ALVSIS.ANGFINFVNPELGSIDQVRYGHNkaitalsssadgktlfsadaeghins  349
ident                          |                                  
Sbjct PDgkKVYVALsFXNTVSVIDTATNTITATXAVGK..........................  286
DSSP  LLllEEEEEElLLLEEEEEELLLLEEEEEEELLL..........................


DSSP  eellllleeellllllllleeeeeellllleeeeellleeeeellllllllhhhleeeel
Query wdistgisnrvfpdvhatmitgikttskgdlftvswddhlkvvpaggsgvdsskavankl  409
ident                                                             
Sbjct ............................................................  286
DSSP  ............................................................


DSSP  llleeeeeelllllleeeeelleeeeeelleeeeeelllleeeeeellllleeeeeelll
Query ssqplglavsadgdiavaacykhiaiyshgkltevpisynsscvalsndkqfvavggqds  469
ident                                                             
Sbjct ...........................................................n  287
DSSP  ...........................................................l


DSSP  eeeeeeeelleeeeeeeeelllleeeeeellLLLEeeeeelllleeeeehhhlleellll
Query kvhvyklsgasvsevktivhpaeitsvafsnNGAFlvatdqsrkvipysvannfelahtn  529
ident                                                             
Sbjct pyasgqfigsipvqpvypsadfksnitsgyiFLSE.........................  322
DSSP  eellllleeellllllllllleeellllleeELLL.........................


DSSP  lllllllleeeeeelllLLEEEEeelllleeeeelllllllleEELLLllllleEEEEEE
Query swtfhtakvacvswspdNVRLATgsldnsvivwnmnkpsdhpiIIKGAhamssvNSVIWL  589
ident                   |                          | |            
Sbjct .................PVQFTD....................LSKDA.....tEWKWDF  340
DSSP  .................LEEEEE....................LLLLL.....lEEEEEL


DSSP  E...................LLEEEEEE.lllLEEEEELLL..........
Query N...................ETTIVSAG.qdsNIKFWNVPF..........  610
ident                      |                             
Sbjct GdgssskkqnpthtysetgiYTVRLTVSnsngTDSQISTVNvvlkgsptps  391
DSSP  LllleellllleellllleeEEEEEEEEelleEEEEEEEEEeellllllll


No 9: 2CE8A  MOLECULE: TRANSDUCIN-LIKE ENHANCER PROTEIN 1;                        

DSSP  ......................................llleeeeeelLLLLLlllllLL
Query ......................................sefsqtalfpSLPRTargtaVV   22
ident                                                             
Sbjct dyfqgamgskpaysfhvtadgqmqpvpfppdaligpgiprharqintlNHGEV....vCA   56
DSSP  lleeeeeeeeelleeeellllleeellllllllllllllleeeeeeeeLLLLL....lLE


DSSP  LEELLLLLEEEEEELLEEEEEELLL..LLLL.EEELLLL..LLEEEEEELLLLLEEEEEE
Query LGNTPAGDKIQYCNGTSVYTVPVGS..LTDT.EIYTEHS..HQTTVAKTSPSGYYCASGD   77
ident                  |                             |  | |     | 
Sbjct VTISNPTRHVYTGGKGCVKVWDISHpgNKSPvSQLDCLNrdNYIRSCKLLPDGCTLIVGG  116
DSSP  EEELLLLLEEEEELLLEEEEEELLLllLLLLlEEEELLLllLLEEEEEELLLLLEEEEEE


DSSP  LLLEEEEEELLLLLLLEEEEEELLLLLEEEEEELLLLLEEEEEELLllLLEEEEELLLLL
Query VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGreRFGHVFLFDTGT  137
ident       |||    |   |                  ||              |      |
Sbjct EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD..GNIAVWDLHNQT  174
DSSP  LLLEEEEEELLLLLLEEEEEEELLLLLEEEEEELLLLLEEEEEELL..LLEEEEELLLLE


DSSP  LLLLLLLLLLLEEEEEELLLLlLEEEEEELLLLEEEEELLLLEEEEEELlLLLLEEEEEE
Query SNGNLTGQARAMNSVDFKPSRpFRIISGSDDNTVAIFEGPPFKFKSTFGeHTKFVHSVRY  197
ident       |        |           |  ||||                 |    |  |
Sbjct LVRQFQGHTDGASCIDISNDG.TKLWTGGLDNTVRSWDLREGRQLQQHD.FTSQIFSLGY  232
DSSP  EEEEELLLLLLEEEEEELLLL.LEEEEEELLLEEEEEELLLLLEEEEEE.LLLLEEEEEE


DSSP  LLLLLEEEEEELLLLEEEEELlLLLEEEEElllllllLLLLLLEEEEEELLLLLEEEEEE
Query NPDGSLFASTGGDGTIVLYNGvDGTKTGVFeddslknVAHSGSVFGLTWSPDGTKIASAS  257
ident  | |   |                               |   |  |     |    |  
Sbjct CPTGEWLAVGMESSNVEVLHV.NKPDKYQL.......HLHESCVLSLKFAYCGKWFVSTG  284
DSSP  LLLLLEEEEEELLLLEEEEEL.LLLLEEEE.......LLLLLLEEEEEELLLLLEEEEEE


DSSP  LLLEEEEEELLLLEEEEEEELLllhhHLEEEEEEELL..EEEEEELLLLEEEEELLLlee
Query ADKTIKIWNVATLKVEKTIPVGtrieDQQLGIIWTKQ..ALVSISANGFINFVNPELgsi  315
ident  |     |                     |           |  |               
Sbjct KDNLLNAWRTPYGASIFQSKES....SSVLSCDISVDdkYIVTGSGDKKATVYEVIY...  337
DSSP  LLLEEEEEELLLLLEEEEEELL....LLEEEEEELLLllEEEEEELLLLEEEEEEEL...


DSSP  eeeelllllleeeeeellllleeeeeelllleeeeellllleeellllllllleeeeeel
Query dqvryghnkaitalsssadgktlfsadaeghinswdistgisnrvfpdvhatmitgiktt  375
ident                                                             
Sbjct ............................................................  337
DSSP  ............................................................


DSSP  lllleeeeellleeeeellllllllhhhleeeelllleeeeeelllllleeeeelleeee
Query skgdlftvswddhlkvvpaggsgvdsskavanklssqplglavsadgdiavaacykhiai  435
ident                                                             
Sbjct ............................................................  337
DSSP  ............................................................


DSSP  eelleeeeeelllleeeeeellllleeeeeellleeeeeeeelleeeeeeeeelllleee
Query yshgkltevpisynsscvalsndkqfvavggqdskvhvyklsgasvsevktivhpaeits  495
ident                                                             
Sbjct ............................................................  337
DSSP  ............................................................


DSSP  eeellllleeeeeelllleeeeehhhlleelllllllllllleeeeeellllleeeeeel
Query vafsnngaflvatdqsrkvipysvannfelahtnswtfhtakvacvswspdnvrlatgsl  555
ident                                                             
Sbjct ............................................................  337
DSSP  ............................................................


DSSP  llleeeeelllllllleeelllllllleeeeeeeelleeeeeelllleeeeelll
Query dnsvivwnmnkpsdhpiiikgahamssvnsviwlnettivsagqdsnikfwnvpf  610
ident                                                        
Sbjct .......................................................  337
DSSP  .......................................................


No 10: 1P22A  MOLECULE: F-BOX/WD-REPEAT PROTEIN 1A;                                

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct spaimlqrdfitalpargldhiaenilsyldakslcaaelvckewyrvtsdgmlwkklie   60
DSSP  lllllllllhhhhlhhhllhhhhhhhhllllhhhhhhhhhhlhhhhhhhhhllhhhhhhh


DSSP  .....................................................llleeee
Query .....................................................sefsqta    7
ident                                                             
Sbjct rmvrtdslwrglaerrgwgqylfppnsfyralypkiiqdietiesnwrcgrhslqrihcr  120
DSSP  hhhlllhhhhhhhhlllhhhhlllllhhhhhhhhhhhhhhhhhhhhlllllllllleell


DSSP  eelLLLLllllllLLLEEllLLLEEEEEE.LLEEEEEELLLLLLLEEELLLLLLEEEEEE
Query lfpSLPRtargtaVVLGNtpAGDKIQYCN.GTSVYTVPVGSLTDTEIYTEHSHQTTVAKT   66
ident    |           |       ||                |    | | |         
Sbjct setSKGV......YCLQY..DDQKIVSGLrDNTIKIWDKNTLECKRILTGHTGSVLCLQY  172
DSSP  lllLLLE......EEEEL..LLLEEEEEElLLLEEEEELLLLLEEEEELLLLLLEEEEEL


DSSP  LllLLEEEEEELLLEEEEEELLLllLLEEEEEELLLLLEEEEEELllLLEEEEEELLllL
Query SpsGYYCASGDVHGNVRIWDTTQttHILKTTIPVFSGPVKDISWDseSKRIAAVGEGreR  126
ident          |     || ||          |       |                    |
Sbjct D..ERVIITGSSDSTVRVWDVNT..GEMLNTLIHHCEAVLHLRFN..NGMMVTCSKD..R  224
DSSP  L..LLEEEEEELLLLEEEEELLL..LLEEEEELLLLLLEEEEELL..LLEEEEEELL..L


DSSP  LEEEEELL...LLLLLLLLLLLLLLEEEEEELlllLLEEEEEELLLLEEEEELLLLEEEE
Query FGHVFLFD...TGTSNGNLTGQARAMNSVDFKpsrPFRIISGSDDNTVAIFEGPPFKFKS  183
ident    |         |    | |   | | |||       | | | | |          |  
Sbjct SIAVWDMAsptDITLRRVLVGHRAAVNVVDFD...DKYIVSASGDRTIKVWNTSTCEFVR  281
DSSP  LEEEEELLlllLLEEEEEELLLLLLEEEEEEE...LLEEEEEELLLEEEEEELLLLLEEE


DSSP  EELLLLLLEEEEEELllLLEEEEEELLLLEEEEELLLLLEEEEElllllllLLLLLLEEE
Query TFGEHTKFVHSVRYNpdGSLFASTGGDGTIVLYNGVDGTKTGVFeddslknVAHSGSVFG  243
ident |   |        |     |  |   | || |     |    |          |   |  
Sbjct TLNGHKRGIACLQYR..DRLVVSGSSDNTIRLWDIECGACLRVL.......EGHEELVRC  332
DSSP  EEELLLLLEEEEEEE..LLEEEEEELLLLEEEEELLLLLEEEEE.......LLLLLLEEE


DSSP  EEELllLLEEEEEELLLEEEEEELLLL.........EEEEEEELLllhHHLEEEEEEELL
Query LTWSpdGTKIASASADKTIKIWNVATL.........KVEKTIPVGtriEDQQLGIIWTKQ  294
ident          | |   |  || |                  |                   
Sbjct IRFD..NKRIVSGAYDGKIKVWDLVAAldprapagtLCLRTLVEH...SGRVFRLQFDEF  387
DSSP  EELL..LLEEEEEELLLLEEEEEHHHHlllllllllLEEEEELLL...LLLLLLEEELLL


DSSP  EEEEEELLLLEEEEElllleeeeeelllllleeeeeellllleeeeeelllleeeeelll
Query ALVSISANGFINFVNpelgsidqvryghnkaitalsssadgktlfsadaeghinswdist  354
ident   || |    |                                                 
Sbjct QIVSSSHDDTILIWD.............................................  402
DSSP  LEEELLLLLEEEEEL.............................................


DSSP  lleeellllllllleeeeeellllleeeeellleeeeellllllllhhhleeeellllee
Query gisnrvfpdvhatmitgikttskgdlftvswddhlkvvpaggsgvdsskavanklssqpl  414
ident                                                             
Sbjct ............................................................  402
DSSP  ............................................................


DSSP  eeeelllllleeeeelleeeeeelleeeeeelllleeeeeellllleeeeeellleeeee
Query glavsadgdiavaacykhiaiyshgkltevpisynsscvalsndkqfvavggqdskvhvy  474
ident                                                             
Sbjct ............................................................  402
DSSP  ............................................................


DSSP  eeelleeeeeeeeelllleeeeeellllleeeeeelllleeeeehhhlleelllllllll
Query klsgasvsevktivhpaeitsvafsnngaflvatdqsrkvipysvannfelahtnswtfh  534
ident                                                             
Sbjct ............................................................  402
DSSP  ............................................................


DSSP  llleeeeeellllleeeeeelllleeeeelllllllleeelllllllleeeeeeeellee
Query takvacvswspdnvrlatgsldnsvivwnmnkpsdhpiiikgahamssvnsviwlnetti  594
ident                                                             
Sbjct ............................................................  402
DSSP  ............................................................


DSSP  eeeelllleeeeelll
Query vsagqdsnikfwnvpf  610
ident                 
Sbjct ................  402
DSSP  ................


No 11: 2I3SA  MOLECULE: CELL CYCLE ARREST PROTEIN;                                 

DSSP  lllEEEEEELllllllllllllleellllleeeeeelleeeeeellllllleeellllll
Query sefSQTALFPslprtargtavvlgntpagdkiqycngtsvytvpvgsltdteiytehshq   60
ident     |                                                       
Sbjct ...MQIVQIE..................................................    7
DSSP  ...LEEEELL..................................................


DSSP  eeeeeellllleeeeeellleeeeeellllllleeeeeellllleeeeeellllleeeee
Query ttvaktspsgyycasgdvhgnvriwdttqtthilkttipvfsgpvkdiswdseskriaav  120
ident                                                             
Sbjct ............................................................    7
DSSP  ............................................................


DSSP  elllllleeeeelllllllllllllllleeeeeelllllleeeeeelllleeeeelllle
Query gegrerfghvflfdtgtsngnltgqaramnsvdfkpsrpfriisgsddntvaifegppfk  180
ident                                                             
Sbjct ............................................................    7
DSSP  ............................................................


DSSP  eeeeelllllleeeeeellllleeeeeelllleeeeellllleeeeelllllllllllll
Query fkstfgehtkfvhsvrynpdgslfastggdgtivlyngvdgtktgvfeddslknvahsgs  240
ident                                                             
Sbjct ............................................................    7
DSSP  ............................................................


DSSP  eeeeeellllleeeeeellleeeeeelllleeeeeeellllhhhleeeeeeelleeeeee
Query vfgltwspdgtkiasasadktikiwnvatlkvektipvgtriedqqlgiiwtkqalvsis  300
ident                                                             
Sbjct ............................................................    7
DSSP  ............................................................


DSSP  lllleeeeelllleeeeeeLLLLLLEEEEEELLLLLEEEEEELLLLEEEEELL....LLL
Query angfinfvnpelgsidqvrYGHNKAITALSSSADGKTLFSADAEGHINSWDIS....TGI  356
ident                          |           |      |               
Sbjct ...................QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDiqakNVD   48
DSSP  ...................LLLLLLEEEEEEEHHHLEEEEEELLLEEEEEEEEllllEEE


DSSP  EEELllLLLLLLEEEEEELL..LLLEEEEELLLEEEEELlllllLLHHH.LEEE.ELLL.
Query SNRVfpDVHATMITGIKTTS..KGDLFTVSWDDHLKVVPaggsgVDSSK.AVAN.KLSS.  411
ident                                      |         |    |       
Sbjct LLQS..LRYKHPLLCCNFIDntDLQIYVGTVQGEILKVD.....LIGSPsFQALtNNEAn  101
DSSP  EEEE..EELLLLEEEEEEEEllLEEEEEEELLLLEEEEL.....LLLLLlEEELlLLLLl


DSSP  .LEEEEEELLLlLLEEEEELL.EEEEEEL....LEEEE.EELL.LLEEEEEELllLLEEE
Query .QPLGLAVSADgDIAVAACYK.HIAIYSH....GKLTE.VPIS.YNSSCVALSndKQFVA  463
ident           | |   ||     |                                    
Sbjct lGICRICKYGD.DKLIAASWDgLIEVIDPrnygDGVIAvKNLNsNKIFTMDTN..SSRLI  158
DSSP  lLEEEEEEELL.LEEEEEELLlEEEEELHhhhlLLEEEeEELLlLLEEEEEEL..LLEEE


DSSP  EEELLLEEEEEEEEL.lEEEEeEEEE..LLLLEEEEEELLL.LLEEEEEELLLLEEEEEH
Query VGGQDSKVHVYKLSG.aSVSEvKTIV..HPAEITSVAFSNN.GAFLVATDQSRKVIPYSV  519
ident ||   | |    |                   |  ||                 |     
Sbjct VGMNNSQVQWFRLPLceDDNG.TIEEsgLKYQIRDVALLPKeQEGYACSSIDGRVAVEFF  217
DSSP  EEELLLEEEEEELLLllLLLL.EEEEllLLLLEEEEEELLHhHLEEEEEELLLEEEEEEL


DSSP  HH.....llEELLllLLLLLL.........LLEEEEEELLLLLEEEEEELLLLEEEEELL
Query AN.....nfELAHtnSWTFHT.........AKVACVSWSPDNVRLATGSLDNSVIVWNMN  565
ident                    |            |     ||    | |   |     ||  
Sbjct DDqgddynsSKRF..AFRCHRlnlkdtnlaYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ  275
DSSP  LLlllllllLLLE..EEELLEellllleeeLLEEEEEELLLLLLEEEEELLLLEEEEELL


DSSP  LLlLLLEEELLlLLLLLEEEEEEEElLEEEEEELL.................LLEEE.EE
Query KPsDHPIIIKGaHAMSSVNSVIWLNeTTIVSAGQD.................SNIKF.WN  607
ident                 ||             |  |                 | |     
Sbjct TR.KKIKNFAK.FNEDSVVKIACSD.NILCLATSDdtfktnaaidqtielnaSSIYIiFD  332
DSSP  LL.EEEEELLL.LLLLEEEEEEELL.LEEEEEEELlhhhhllllllllllllLEEEEeEL


DSSP  LLl
Query VPf  610
ident    
Sbjct YE.  334
DSSP  LL.


No 12: 2PM6B  MOLECULE: PROTEIN TRANSPORT PROTEIN SEC31;                           

DSSP  llleeeeeelllllllllllllleellllleeeeeelleeeeeelllllllEEEL.LLLL
Query sefsqtalfpslprtargtavvlgntpagdkiqycngtsvytvpvgsltdtEIYT.EHSH   59
ident                                                          |  
Sbjct ...................................................VVIAnAHNE    9
DSSP  ...................................................LEELlLLLL


DSSP  LEEEEEELLLLLEEEEEELLLEEEEEELLLLLLLEEEEEELLLLLEEEEEELLL..LLEE
Query QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE..SKRI  117
ident     |     |   |         |      || |  |     |||    |         
Sbjct LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPkfGTIL   69
DSSP  LEEEELLLLLLLEEEEEELLLEEEEEEELLLLEEEEEEEELLLLLEEEEEELLHhhLLEE


DSSP  EEEELLllLLEEEEELL..LLLLLLLLLLLLLLEEEEEELLL.LLLEEEEEELLLLEEEE
Query AAVGEGreRFGHVFLFD..TGTSNGNLTGQARAMNSVDFKPS.RPFRIISGSDDNTVAIF  174
ident |                                 |||   |          | |  |   
Sbjct ASCSYD..GKVLIWKEEngRWSQIAVHAVHSASVNSVQWAPHeYGPLLLVASSDGKVSVV  127
DSSP  EEEELL..LEEEEEEEEllEEEEEEEELLLLLLEEEEEELLLlLLLLEEEEELLLEEEEE


DSSP  ELL..llEEEEEELLLLLLEEEEEELLL.lLEEEEEELLLLEEEEEL....lLLLEEEEE
Query EGP..pfKFKSTFGEHTKFVHSVRYNPD.gSLFASTGGDGTIVLYNG....vDGTKTGVF  227
ident |              |   | |    |     |   | |                     
Sbjct EFKengtTSPIIIDAHAIGVNSASWAPAtsRKFVTGGADNLVKIWKYnsdaqTYVLESTL  187
DSSP  LLLllllLLLEEEELLLLLEEEEEELLLllLEEEEEELLLLEEEEEEehhhlEEEEEEEE


DSSP  LlllllllLLLLLEEEEEELLL...lLEEEEEELLLEEEEEELL....LLEEeEEEELLL
Query EddslknvAHSGSVFGLTWSPD...gTKIASASADKTIKIWNVA....TLKVeKTIPVGT  280
ident |        ||  |    |||        || | | |  ||         |         
Sbjct E.......GHSDWVRDVAWSPTvllrSYLASVSQDRTCIIWTQDneqgPWKK.TLLKEEK  239
DSSP  L.......LLLLLEEEEEELLLllllEEEEEEELLLLEEEEEELllllLLEE.EELLLLL


DSSP  lHHHLEEEEEEELL..EEEEEELLLLEEEEEL...LLLEEEeeelllllleeeeeellll
Query rIEDQQLGIIWTKQ..ALVSISANGFINFVNP...ELGSIDqvryghnkaitalsssadg  335
ident    |      |      |                                          
Sbjct .FPDVLWRASWSLSgnVLALSGGDNKVTLWKEnleGKWEPA...................  279
DSSP  .LLLLLLEEEELLLllLEEEELLLLLEEEEEElllLLEEEL...................


DSSP  leeeeeelllleeeeellllleeellllllllleeeeeellllleeeeellleeeeelll
Query ktlfsadaeghinswdistgisnrvfpdvhatmitgikttskgdlftvswddhlkvvpag  395
ident                                                             
Sbjct ............................................................  279
DSSP  ............................................................


DSSP  lllllhhhleeeelllleeeeeelllllleeeeelleeeeeelleeeeeelllleeeeee
Query gsgvdsskavanklssqplglavsadgdiavaacykhiaiyshgkltevpisynsscval  455
ident                                                             
Sbjct ............................................................  279
DSSP  ............................................................


DSSP  llllleeeeeellleeeeeeeelleeeeeeeeelllleeeeeellllleeeeeellllee
Query sndkqfvavggqdskvhvyklsgasvsevktivhpaeitsvafsnngaflvatdqsrkvi  515
ident                                                             
Sbjct ............................................................  279
DSSP  ............................................................


DSSP  eeehhhlleelllllllllllleeeeeellllleeeeeelllleeeeelllllllleeel
Query pysvannfelahtnswtfhtakvacvswspdnvrlatgsldnsvivwnmnkpsdhpiiik  575
ident                                                             
Sbjct ............................................................  279
DSSP  ............................................................


DSSP  llllllleeeeeeeelleeeeeelllleeeeelll
Query gahamssvnsviwlnettivsagqdsnikfwnvpf  610
ident                                    
Sbjct ...................................  279
DSSP  ...................................


No 13: 2IWFA  MOLECULE: NITROUS-OXIDE REDUCTASE;                                   

DSSP  llleeeeeelllllllllllllleellllLEEEEEE..LLEEEEEELLLLLLLEEELLL.
Query sefsqtalfpslprtargtavvlgntpagDKIQYCN..GTSVYTVPVGSLTDTEIYTEH.   57
ident                                                 |           
Sbjct .................adgsvapgklddYYGFWSSgqTGEMRILGIPSMRELMRVPVFn   43
DSSP  .................llllllllllllEEEEELLllLLEEEEEEELLLEEEEEEELLl


DSSP  ......................................LLLEEEEEELL.....LLLEEE
Query ......................................SHQTTVAKTSP.....SGYYCA   74
ident                                                |       | |  
Sbjct rcsatgwgqtnesirihqrtmtektkkqlaangkkihdNGDLHHVHMSFtdgkyDGRYLF  103
DSSP  llllllllllhhhhhhhhllllhhhhhhhhllllllllLLLLLLEEEEEelleeEEEEEE


DSSP  EEEL.LLEEEEEELLLllLLEEEEEELL.LLLEEEEEELL..LLLEEEEEELLLL.....
Query SGDV.HGNVRIWDTTQttHILKTTIPVF.SGPVKDISWDS..ESKRIAAVGEGRE.....  125
ident   |     |                                  |      ||        
Sbjct MNDKaNTRVARVRCDV..MKTDAILEIPnAKGIHGMRPQKwpRSNYVFCNGEDEAplvnd  161
DSSP  EEELlLLEEEEEELLL..LEEEEEEELLlLEEEEEEEELLllLLLEEEEEEEELLlllll


DSSP  ...........LLEEEEELLLLLLLLLLLLlLLLEEEEEELLLLlLEEEEEELL......
Query ...........RFGHVFLFDTGTSNGNLTGqARAMNSVDFKPSRpFRIISGSDD......  168
ident                    |                  |          | |        
Sbjct gstmtdvatyvNIFTAVDADKWEVAWQVKV.SGNLDNCDADYEG.KWAFSTSYNsemgmt  219
DSSP  llllllhhhllEEEEEEELLLLEEEEEEEE.LLLLLLEEELLLL.LEEEEEELLllllll


DSSP  .........LLEEEEELLLL..........................eEEEEELLLlLLEE
Query .........NTVAIFEGPPF..........................kFKSTFGEHtKFVH  193
ident            |  |                                |           |
Sbjct leemtksemDHVVVFNIAEIekaikagqyeeingvkvvdgrkeakslFTRYIPIA.NNPH  278
DSSP  hhhhlllllEEEEEEEHHHHhhhhhlllleeelleeeeellhhhlllLEEEEEEL.LLLL


DSSP  EEEELLLLLEEEEEEL.LLLEEEEELLLL............LEEEEElllllllLLLLlL
Query SVRYNPDGSLFASTGG.DGTIVLYNGVDG............TKTGVFeddslknVAHSgS  240
ident      ||       |    |                                        
Sbjct GCNMAPDRKHLCVAGKlSPTVTVLDVTKFdalfydnaeprsAVVAEP.......ELGL.G  330
DSSP  LEEELLLLLEEEEELLlLLLEEEEEHHHLhhhhlllllhhhHEEELL.......LLLL.L


DSSP  EEEEEELLLlLEEEEEEL.LLEEEEEELLLL..........EEEEEEELLllhhHLEEEE
Query VFGLTWSPDgTKIASASA.DKTIKIWNVATL..........KVEKTIPVGtrieDQQLGI  289
ident                    |     ||                     |      |    
Sbjct PLHTAFDGR.GNAYTSLFlDSQVVKWNIDEAirayagekinPIKDKLDVQ....YQPGHL  385
DSSP  EEEEEELLL.LEEEEEELlLLEEEEEEHHHHhhhhllllllLEEEEEELL....LLEEEE


DSSP  EEEL........LEEEEEELL.............LLEEEEEL..LLLEEEEEELLLLlle
Query IWTK........QALVSISAN.............GFINFVNP..ELGSIDQVRYGHNkai  326
ident               ||                                            
Sbjct KTVMgetldaanDWLVCLCKFskdrflnvgplkpENDQLIDIsgDKMVLVHDGPTFA...  442
DSSP  EELLllllllllLEEEEEELLlllllllllllllEEEEEEELllLLLEEEEEEEELL...


DSSP  eeeeellllleeeeeelllleeeeellllleeellllllllleeeeeellllleeeeell
Query talsssadgktlfsadaeghinswdistgisnrvfpdvhatmitgikttskgdlftvswd  386
ident                                                             
Sbjct ............................................................  442
DSSP  ............................................................


DSSP  leeeeellllllllhhhleeeelllleeeeeelllllleEEEElleeeeeelleeeeeel
Query dhlkvvpaggsgvdsskavanklssqplglavsadgdiaVAACykhiaiyshgkltevpi  446
ident                                         |                   
Sbjct .....ephdaiavspsilpnirsvwdrndplwaetrkqaEADE.................  480
DSSP  .....lllleeeelhhhllllllllllllhhhhhhhhhhHHLL.................


DSSP  llleeeeeelllLLEEEEEElLLEEEEEeeelleeeeeeeeelllleeeeeellllLEEE
Query synsscvalsndKQFVAVGGqDSKVHVYklsgasvsevktivhpaeitsvafsnngAFLV  506
ident                        || ||                                
Sbjct .......vdideWTEAVIRD.GNKVRVY..................mtsvapsfsqPSFT  514
DSSP  .......lllllLLLLEEEE.LLEEEEE..................eeeelleellLEEE


DSSP  EEEL.llleeeeehhhlleellllllLLLLLleeeeeellllleeeeeelLLLE......
Query ATDQ.srkvipysvannfelahtnswTFHTAkvacvswspdnvrlatgslDNSV......  559
ident                             |                        |      
Sbjct VKEGdevtvivtnldeiddlthgftmGNHGV...................AMEVgpqqts  555
DSSP  EELLleeeeeeeelllllllleeeeeLLLLE...................EEEEllllee


DSSP  ...eeeelllllllLEEElllllllleeeeeeeelleeeeeelllleeeeELLL......
Query ...ivwnmnkpsdhPIIIkgahamssvnsviwlnettivsagqdsnikfwNVPF......  610
ident                                                             
Sbjct svtfvaanpgvywyYCQW................................FCHAlhmemr  583
DSSP  eeeeelllleeeeeELLL................................LLLLllllle


DSSP  .......
Query .......  610
ident        
Sbjct grmfvep  590
DSSP  eeeeeel


No 14: 2PM9A  MOLECULE: PROTEIN TRANSPORT PROTEIN SEC31;                           

DSSP  llleeeeeeLLLLLlllllllLLEELLL.lLEEEEEE...........LLEEEEEELLL.
Query sefsqtalfPSLPRtargtavVLGNTPA.gDKIQYCN...........GTSVYTVPVGS.   47
ident           |                                       |         
Sbjct .......aeFSRTA.......TFAWSHDkiPLLVSGTvsgtvdanfstDSSLELWSLLAa   46
DSSP  .......leEEELL.......LLLLLLLllLEEEELLlllllllllllLLLLEEEELLLh


DSSP  .LLLL.EEELLlLLLEEEEEELLLLLEEEEEELLLEEEEEELLL..LLLLEEEEEELLLL
Query .LTDT.EIYTEhSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ..TTHILKTTIPVFSG  103
ident                      |      |     |      |                | 
Sbjct dSEKPiASLQV.DSKFNDLDWSHNNKIIAGALDNGSLELYSTNEanNAINSMARFSNHSS  105
DSSP  hHLLLlLLLLL.LLLEEEEEELLLLLLEEEEELLLLEEEELLLLllLLLLEEEELLLLLL


DSSP  LEEEEEELL.LLLEEEEEELLllLLEEEEELLLL.......LLLLLLLLLL..LLEEEEE
Query PVKDISWDS.ESKRIAAVGEGreRFGHVFLFDTG.......TSNGNLTGQA..RAMNSVD  153
ident  ||            |  |                      |               |  
Sbjct SVKTVKFNAkQDNVLASGGNN..GEIFIWDMNKCtespsnyTPLTPGQSMSsvDEVISLA  163
DSSP  LLLEEEELLlLLLLEEEELLL..LLEELLLLLLLlllllllLLLLLLLLLLllLLLLEEE


DSSP  ELLLLLLEEEEEELLLLEEEEELLLLEEEEEELL......lLLLEEEEEELLL.LLEEEE
Query FKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE......hTKFVHSVRYNPD.GSLFAS  206
ident    |      |    |   |      |                    |   |      | 
Sbjct WNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYtspnsgiKQQLSVVEWHPKnSTRVAT  223
DSSP  ELLLLLLEEEEELLLLLEEEEELLLLEEEEEELLlllllllLLLEEEEEELLLlLLEEEE


DSSP  EELL...LLEEEEELLLL.LEEEEELllllllLLLLLLEEEEEELL.LLLEEEEEELLLE
Query TGGD...GTIVLYNGVDG.TKTGVFEddslknVAHSGSVFGLTWSP.DGTKIASASADKT  261
ident   |      |         |              |      | |   |     |   | |
Sbjct ATGSdndPSILIWDLRNAnTPLQTLN......QGHQKGILSLDWCHqDEHLLLSSGRDNT  277
DSSP  EELLlllLLLLEEELLLLlLLLLLLL......LLLLLLEEEEEELLlLLLLEEEEELLLE


DSSP  EEEEELLLLEEEEEEELLllhHHLEEEEEE.ELLE..EEEEELLLLEEEEELLLleeeee
Query IKIWNVATLKVEKTIPVGtriEDQQLGIIW.TKQA..LVSISANGFINFVNPELgsidqv  318
ident    ||          |                         |    |             
Sbjct VLLWNPESAEQLSQFPAR...GNWCFKTKFaPEAPdlFACASFDNKIEVQTLQN......  328
DSSP  EEEELLLLLLEEEEEELL...LLLLLLEEElLLLLleEEELLLLLEEEEEELLL......


DSSP  elllllleeeeeellllleeeeeelllleeeeellllleeellllllllleeeeeellll
Query ryghnkaitalsssadgktlfsadaeghinswdistgisnrvfpdvhatmitgikttskg  378
ident                                                             
Sbjct ............................................................  328
DSSP  ............................................................


DSSP  leeeeellleeeeelllLLLLlhhhleeeelllleeeeeelllllleeeeelleeeeeel
Query dlftvswddhlkvvpagGSGVdsskavanklssqplglavsadgdiavaacykhiaiysh  438
ident                                                             
Sbjct ..............ltnTLDE.......................................  335
DSSP  ..............lllLLLL.......................................


DSSP  leeeeeelllleeeeeellllleeeeeellleeEEEEeelleeEEEEEeelllleeeeee
Query gkltevpisynsscvalsndkqfvavggqdskvHVYKlsgasvSEVKTivhpaeitsvaf  498
ident                                  |                          
Sbjct ..........skekpsvfhlqaptwygepspaaHWAF......GGKLV............  367
DSSP  ..........lllllllllllllllllllllllEEEL......LLEEE............


DSSP  llllleeeeeelllleeeeehhhLLEElllllllllllleeeeeellllleeeeeellll
Query snngaflvatdqsrkvipysvanNFELahtnswtfhtakvacvswspdnvrlatgsldns  558
ident                                                             
Sbjct ..........qitpdgkgvsitnPKIS.................................  384
DSSP  ..........lllllllllllllLLLL.................................


DSSP  eeeeelllllllleeelllllllleeeeeeeelleeeeeelllleeeeelll
Query vivwnmnkpsdhpiiikgahamssvnsviwlnettivsagqdsnikfwnvpf  610
ident                                                     
Sbjct ....................................................  384
DSSP  ....................................................


No 15: 1RI6A  MOLECULE: PUTATIVE ISOMERASE YBHE;                                   

DSSP  llleeeeeelllllllllllllleellllLEEEEEE..LLEEEEEELL...LLLLLEEEL
Query sefsqtalfpslprtargtavvlgntpagDKIQYCN..GTSVYTVPVG...SLTDTEIYT   55
ident                                                     || |    
Sbjct ..........................slkQTVYIASpeSQQIHVWNLNhegALTLTQVVD   34
DSSP  ..........................lleEEEEEEEhhHLEEEEEEELlllLEEEEEEEE


DSSP  LlLLLEEEEEELLLLLEEEEEEL.LLEEEEEELLLL..lLLEEEEEELLlLLEEEEEELL
Query EhSHQTTVAKTSPSGYYCASGDV.HGNVRIWDTTQT..tHILKTTIPVFsGPVKDISWDS  112
ident     |      ||   |   |      |                      |    || | 
Sbjct V.PGQVQPMVVSPDKRYLYVGVRpEFRVLAYRIAPDdgaLTFAAESALP.GSLTHISTDH   92
DSSP  L.LLLLLLEEELLLLLEEEEEELlLLEEEEEEELLLlllEEEEEEEELL.LLLLEEEELL


DSSP  LLLEEEEEELLlLLLEEEEEL...LLLLLLLLLLLLlLLEEEEEELLLLlLEEEEEEL.L
Query ESKRIAAVGEGrERFGHVFLF...DTGTSNGNLTGQaRAMNSVDFKPSRpFRIISGSD.D  168
ident                  |                |      |    |             
Sbjct QGQFVFVGSYN.AGNVSVTRLedgLPVGVVDVVEGL.DGCHSANISPDN.RTLWVPALkQ  149
DSSP  LLLEEEEEELL.LLEEEEEEEellEEEEEEEEELLL.LLLLLLEELLLL.LEEEEEEHhH


DSSP  LLEEEEELL...LLEEE..EEELLL.LLLEEEEEELLLLLEEEEEEL.LLLEEEEELL..
Query NTVAIFEGP...PFKFK..STFGEH.TKFVHSVRYNPDGSLFASTGG.DGTIVLYNGV..  219
ident      |                              |                       
Sbjct DRICLFTVSddgHLVAQdpAEVTTVeGAGPRHMVFHPNEQYAYCVNElNSSVDVWELKdp  209
DSSP  LEEEEEEELlllLEEEEeeEEEELLlLLLEEEEEELLLLLEEEEEELlLLEEEEEELLll


DSSP  ..LLLEEEEElllllllLLLL......LLEEEEEELLLLLEEEEEEL.LLEEEEEELL..
Query ..DGTKTGVFeddslknVAHS......GSVFGLTWSPDGTKIASASA.DKTIKIWNVA..  268
ident                                     |||            |    |   
Sbjct hgNIECVQTL.......DMMPenfsdtRWAADIHITPDGRHLYACDRtASLITVFSVSed  262
DSSP  llLLEEEEEE.......ELLLllllllLLEEEEEELLLLLEEEEEELlLLEEEEEEELll


DSSP  ..LLEEEEEEELlllhhHLEEEEEEELL..EEEEEEL.LLLEEEEELLL...LEEEEEEL
Query ..TLKVEKTIPVgtrieDQQLGIIWTKQ..ALVSISA.NGFINFVNPEL...GSIDQVRY  320
ident    |  |   |       |  |         |         |                ||
Sbjct gsVLSKEGFQPT....eTQPRGFNVDHSgkYLIAAGQkSHHISVYEIVGeqgLLHEKGRY  318
DSSP  llLEEEEEEEEL....lLLLLLEEELLLllEEEEELLlLLEEEEEEEELlllEEEEEEEE


DSSP  LLLlleeeeeellllleeeeeelllleeeeellllleeellllllllleeeeeellllle
Query GHNkaitalsssadgktlfsadaeghinswdistgisnrvfpdvhatmitgikttskgdl  380
ident                                                             
Sbjct AVG.........................................................  321
DSSP  ELL.........................................................


DSSP  eeeellleeeeellllllllhhhleeeelllleeeeeelllllleeeeelleeeeeelle
Query ftvswddhlkvvpaggsgvdsskavanklssqplglavsadgdiavaacykhiaiyshgk  440
ident                                                             
Sbjct ............................................................  321
DSSP  ............................................................


DSSP  eeeeelllleeeeeellllleeeeeellleeeeeeeelleeeeeeeeelllleeeeeell
Query ltevpisynsscvalsndkqfvavggqdskvhvyklsgasvsevktivhpaeitsvafsn  500
ident                                                             
Sbjct ............................................................  321
DSSP  ............................................................


DSSP  llleeeeeelllleeeeehhhlleelllllllllllleeeeeellllleeeeeellllee
Query ngaflvatdqsrkvipysvannfelahtnswtfhtakvacvswspdnvrlatgsldnsvi  560
ident                                                             
Sbjct ............................................................  321
DSSP  ............................................................


DSSP  eeelllllllleeelllllllleeeeeeeelleeeeeelllleeeeelll
Query vwnmnkpsdhpiiikgahamssvnsviwlnettivsagqdsnikfwnvpf  610
ident                                                   
Sbjct ......................................qgpmwvvvnahe  333
DSSP  ......................................lllleeeeeeel


No 16: 2OVPB  MOLECULE: S-PHASE KINASE-ASSOCIATED PROTEIN 1A;                      

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct tqvkhmmqviepqfqrdfisllpkelalyvlsflepkdllqaaqtcrywrilaednllwr   60
DSSP  llhhhhhhhhlllllllhhhhllhhhhhhhhllllhhhhhhhhlllhhhhhhhllhhhhh


DSSP  ...........................................llleeeEEEL...LLLL
Query ...........................................sefsqtALFP...SLPR   14
ident                                                   |         
Sbjct ekckeegideplhikvikpgfihspwksayirqhridtnwrrgelkspkVLKGhddHVIT  120
DSSP  hhhhhlllllllllllllllllllhhhhhhhhhhhhhhhhhllllllleEEELlllLLEE


DSSP  llllllllLEELllLLEEEEEE.LLEEEEEELLLlLLLE.EELLLLLLEEEEEELllLLE
Query targtavvLGNTpaGDKIQYCN.GTSVYTVPVGSlTDTE.IYTEHSHQTTVAKTSpsGYY   72
ident         |     |  |                          |               
Sbjct .......cLQFC..GNRIVSGSdDNTLKVWSAVT.GKCLrTLVGHTGGVWSSQMR..DNI  168
DSSP  .......eEEEE..LLEEEEEElLLLEEEEELLL.LLEEeELLLLLLLEEEEEEL..LLE


DSSP  EEEEELLLEEEEEELLLllLLEEEEEELLLLLEEEEEELllLLEEEEEELLllLLEEEEE
Query CASGDVHGNVRIWDTTQttHILKTTIPVFSGPVKDISWDseSKRIAAVGEGreRFGHVFL  132
ident   ||        |           |       |         ||             |  
Sbjct IISGSTDRTLKVWNAET..GECIHTLYGHTSTVRCMHLH..EKRVVSGSRD..ATLRVWD  222
DSSP  EEEEELLLEEEEEELLL..LLEEEEEELLLLLLLEEEEE..LLEEEEELLL..LEEEEEE


DSSP  LLLLLLLLLLLLLLLLEEEEEELLlllLEEEEEELLLLEEEEELLLLEEEEEELLLLLLE
Query FDTGTSNGNLTGQARAMNSVDFKPsrpFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV  192
ident   ||     | |   |   |        |  ||  |  |            |   ||  |
Sbjct IETGQCLHVLMGHVAAVRCVQYDG...RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV  279
DSSP  LLLLLLLEEEELLLLLEEEEEELL...LLEEEEELLLLEEEEEHHHLEEEEEELLLLLLE


DSSP  EEEEELllLLEEEEEELLLLEEEEELLLLLEEEEElllllllLLLLLLEEEEEELllLLE
Query HSVRYNpdGSLFASTGGDGTIVLYNGVDGTKTGVFeddslknVAHSGSVFGLTWSpdGTK  252
ident  |      |    |   |  |       |               |     |         
Sbjct YSLQFD..GIHVVSGSLDTSIRVWDVETGNCIHTL.......TGHQSLTSGMELK..DNI  328
DSSP  EEEEEL..LLEEEEEELLLLEEEEELLLLLEEEEE.......LLLLLLEEEEEEE..LLE


DSSP  EEEEELLLEEEEEELLLLEEEEEEELLllhHHLEEEEEEElleEEEEELLLLEEEEELLL
Query IASASADKTIKIWNVATLKVEKTIPVGtriEDQQLGIIWTkqaLVSISANGFINFVNPEL  312
ident   |  || | |||   |     |                        |  |         
Sbjct LVSGNADSTVKIWDIKTGQCLQTLQGPnkhQSAVTCLQFNknfVITSSDDGTVKLWDLKT  388
DSSP  EEEEELLLLEEEEELLLLEEEEEELLLlllLLLEEEEEELlleEEEEELLLEEEEEELLL


DSSP  LEEEE.EELL......................LLLLeeeeeellllleeeeeeLLLLeee
Query GSIDQ.VRYG......................HNKAitalsssadgktlfsadAEGHins  349
ident |                                                           
Sbjct GEFIRnLVTLesggsggvvwrirasntklvcaVGSR.................NGTE...  428
DSSP  LLEEEeEEELllllllleeeeeeellleeeeeEELL.................LLLL...


DSSP  eellllleeellllllllleeeeeellllleeeeellleeeeellllllllhhhleeeel
Query wdistgisnrvfpdvhatmitgikttskgdlftvswddhlkvvpaggsgvdsskavankl  409
ident                                                             
Sbjct ............................................................  428
DSSP  ............................................................


DSSP  llleeeeeelllllleeeeelleeeeeelleeeeeelllleeeeeellllleeeeeelll
Query ssqplglavsadgdiavaacykhiaiyshgkltevpisynsscvalsndkqfvavggqds  469
ident                                                             
Sbjct ............................................................  428
DSSP  ............................................................


DSSP  eeeeeeeelleeeeeeeeelllleeeeeellllleeeeeelllleeeeehhhlleellll
Query kvhvyklsgasvsevktivhpaeitsvafsnngaflvatdqsrkvipysvannfelahtn  529
ident                                                             
Sbjct ............................................................  428
DSSP  ............................................................


DSSP  lllllllleeeeeellllleeeeeelllleeeeelllllllleeelllllllleeeeeee
Query swtfhtakvacvswspdnvrlatgsldnsvivwnmnkpsdhpiiikgahamssvnsviwl  589
ident                                                             
Sbjct ............................................................  428
DSSP  ............................................................


DSSP  elleeeeeelLLLE..eeeelll
Query nettivsagqDSNI..kfwnvpf  610
ident                        
Sbjct ..........ETKLlvldfdvdm  441
DSSP  ..........LLEEeeeelllll


No 17: 2Z2NA  MOLECULE: VIRGINIAMYCIN B LYASE;                                     

DSSP  ..llleeeeeELLLLLllllllLLLEELLLlLEEEEEE..LLEEEEEElLLLLlLEEELL
Query ..sefsqtalFPSLPRtargtaVVLGNTPAgDKIQYCN..GTSVYTVPvGSLTdTEIYTE   56
ident                                 |                        |  
Sbjct efklqelnltNQDTGP......YGITVSDK.GKVWITQhkANXISCIN.LDGK.ITEYPL   51
DSSP  leeeeeeellLLLLLE......EEEEELLL.LLEEEEEllLLEEEEEL.LLLL.EEEEEL


DSSP  LL..LLEEEEEELLLLlEEEEEEL.LLEEEEEELlllLLLEeEEEEL..lLLLEEEEEEL
Query HS..HQTTVAKTSPSGyYCASGDV.HGNVRIWDTtqtTHILkTTIPV..fSGPVKDISWD  111
ident             |  |                       |                |   
Sbjct PTpdAKVXCLTISSDG.EVWFTENaANKIGRITK...KGII.KEYTLpnpDSAPYGITEG  106
DSSP  LLllLLEEEEEELLLL.LEEEEELlLLEEEEELL...LLLE.EEEELlllLLLEEEEEEL


DSSP  LLlLEEEEEELLlLLLEEEEElLLLLLLlLLLL..lLLLEEEEEELLLllLEEEEEELL.
Query SEsKRIAAVGEGrERFGHVFLfDTGTSNgNLTG..qARAMNSVDFKPSrpFRIISGSDD.  168
ident      |                | |                                   
Sbjct PN.GDIWFTEXN.GNRIGRIT.DDGKIR.EYELpnkGSYPSFITLGSD..NALWFTENQn  160
DSSP  LL.LLEEEEELL.LLEEEEEL.LLLLEE.EEELlllLLLEEEEEELLL..LLEEEEELLl


DSSP  LLEEEEELlLLEEeEEELL..lLLLEEEEEELLLlLEEEEEELL.LLEEEEELlLLLEeE
Query NTVAIFEGpPFKFkSTFGE..hTKFVHSVRYNPDgSLFASTGGD.GTIVLYNGvDGTKtG  225
ident |               |                |             |       |    
Sbjct NAIGRITE.SGDI.TEFKIptpASGPVGITKGND.DALWFVEIIgNKIGRITT.SGEI.T  215
DSSP  LEEEEELL.LLLE.EEEELlllLLLEEEEEELLL.LLEEEEELLlLEEEEELL.LLLE.E


DSSP  EELllllllLLLL.LLEEEEEELLLlLEEEEEEL.LLEEEEEElLLLEEeEEEELLLLhH
Query VFEddslknVAHS.GSVFGLTWSPDgTKIASASA.DKTIKIWNvATLKVeKTIPVGTRiE  283
ident  |                  |                 |              |      
Sbjct EFK......IPTPnARPHAITAGAG.IDLWFTEWgANKIGRLT.SNNII.EEYPIQIK.S  265
DSSP  EEE......LLLLlLLEEEEEELLL.LLEEEEELlLLEEEEEE.LLLEE.EEEELLLL.L


DSSP  HLEEEEEEELLEEEEEELLLLEEEEELLlleeeeeelllllleeeeeellllleeeeeel
Query DQQLGIIWTKQALVSISANGFINFVNPElgsidqvryghnkaitalsssadgktlfsada  343
ident     ||               |                                      
Sbjct AEPHGICFDGETIWFAXECDKIGKLTLI................................  293
DSSP  LLEEEEEELLLLEEEEELLLEEEEEEEL................................


DSSP  llleeeeellllleeellllllllleeeeeellllleeeeellleeeeellllllllhhh
Query eghinswdistgisnrvfpdvhatmitgikttskgdlftvswddhlkvvpaggsgvdssk  403
ident                                                             
Sbjct ............................................................  293
DSSP  ............................................................


DSSP  leeeelllleeeeeelllllleeeeelleeeeeelleeeeeelllleeeeeellllleee
Query avanklssqplglavsadgdiavaacykhiaiyshgkltevpisynsscvalsndkqfva  463
ident                                                             
Sbjct ............................................................  293
DSSP  ............................................................


DSSP  eeellleeeeeeeelleeeeeeeeelllleeeeeellllleeeeeelllleeeeehhhll
Query vggqdskvhvyklsgasvsevktivhpaeitsvafsnngaflvatdqsrkvipysvannf  523
ident                                                             
Sbjct ............................................................  293
DSSP  ............................................................


DSSP  eelllllllllllleeeeeellllleeeeeelllleeeeelllllllleeelllllllle
Query elahtnswtfhtakvacvswspdnvrlatgsldnsvivwnmnkpsdhpiiikgahamssv  583
ident                                                             
Sbjct ............................................................  293
DSSP  ............................................................


DSSP  eeeeeeelleeeeeelllleeeeelll
Query nsviwlnettivsagqdsnikfwnvpf  610
ident                            
Sbjct ...........................  293
DSSP  ...........................


No 18: 1K8KC  MOLECULE: ACTIN-LIKE PROTEIN 3;                                      

DSSP  llleeeeeelllllllllllllleellllleeeeeelleeeeeelllllLLEEELllLLL
Query sefsqtalfpslprtargtavvlgntpagdkiqycngtsvytvpvgsltDTEIYTehSHQ   60
ident                                                             
Sbjct .................................................AYHSFL..VEP    9
DSSP  .................................................LEEELL..LLL


DSSP  EEEEEELLLLLEEEEEELLLEEEEEELLLLLLLEEEEEELLLLLEEEEEELLLLLEEEEE
Query TTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAV  120
ident              |       | |                  | |    |   | ||   
Sbjct ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC   69
DSSP  LLEEEELLLLLEEEEELLLLEEEEEEEELLEEEEEEEEELLLLLEEEEEEELLLLEEEEE


DSSP  ELLllLLEEEEELL..LLLLlLLLL.LLLLLEEEEEELLLLlLEEEEEELLLLEEEEEL.
Query GEGreRFGHVFLFD..TGTSnGNLT.GQARAMNSVDFKPSRpFRIISGSDDNTVAIFEG.  176
ident |    |   |      |            ||   |   |        ||      |    
Sbjct GTD..RNAYVWTLKgrTWKP.TLVIlRINRAARCVRWAPNE.KKFAVGSGSRVISICYFe  125
DSSP  ELL..LLEEEEEEEllEEEE.EEELlLLLLLEEEEEELLLL.LEEEEEELLLLEEEEEEe


DSSP  ...lLLEEeEEEL.LLLLLEEEEEELLLLLEEEEEELLLLEEEEELLL............
Query ...pPFKFkSTFG.EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD............  220
ident                    | |    |   | |    |                      
Sbjct qendWWVC.KHIKkPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIkeveerpaptpw  184
DSSP  llllEEEE.EEELlLLLLLEEEEEELLLLLEEEEEELLLLEEEEELLLllllllllllll


DSSP  ......LLEEEEELlllllllLLLLLEEEEEELLLLLEEEEEELLLEEEEEELL.LLEEe
Query ......GTKTGVFEddslknvAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA.TLKVe  273
ident       |                 | | |   |  |   |  | | |           | 
Sbjct gskmpfGELMFESS.......SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADkKMAV.  236
DSSP  llllllLLEEEELL.......LLLLLEEEEEELLLLLEEEEEELLLEEEEEEHHhLLEE.


DSSP  EEEELLllhHHLEEEEEEELL.EEEEEELLLLEEEEELL....LLEEEEEELLLllleee
Query KTIPVGtriEDQQLGIIWTKQ.ALVSISANGFINFVNPE....LGSIDQVRYGHnkaita  328
ident  |           |         ||      |             |              
Sbjct ATLASE...TLPLLAVTFITEsSLVAAGHDCFPVLFTYDsaagKLSFGGRLDVP......  287
DSSP  EEEELL...LLLEEEEEEEELlEEEEEELLLLLEEEEEEllllEEEELLLLLLL......


DSSP  eeelllLLEEeeeelllleeeeellllleeellllllllleeeeeellllleeeeellle
Query lsssadGKTLfsadaeghinswdistgisnrvfpdvhatmitgikttskgdlftvswddh  388
ident                                                             
Sbjct ..tareRFQN..................................................  295
DSSP  ..lhhhHHHH..................................................


DSSP  eeeellllllllhhhleeeelllleeeeeelllllleeeeelleeeeeelleeeeeelll
Query lkvvpaggsgvdsskavanklssqplglavsadgdiavaacykhiaiyshgkltevpisy  448
ident                                                             
Sbjct ............................................................  295
DSSP  ............................................................


DSSP  leeeeeellllleeeeeellleeeeeeeelleeeeeeeeelllleeeeeellllleeeee
Query nsscvalsndkqfvavggqdskvhvyklsgasvsevktivhpaeitsvafsnngaflvat  508
ident                                                             
Sbjct ............................................................  295
DSSP  ............................................................


DSSP  elllleeeeehhhlleelllllllllllleeeeeellllleeeeeelllleeeeelllll
Query dqsrkvipysvannfelahtnswtfhtakvacvswspdnvrlatgsldnsvivwnmnkps  568
ident                                                             
Sbjct ............................................................  295
DSSP  ............................................................


DSSP  llleeelllllllleeeEEEEelleeeeeeLLLL..........................
Query dhpiiikgahamssvnsVIWLnettivsagQDSN..........................  602
ident                                                             
Sbjct ................lDKKA.........AGLDslhknsvsqisvlsggkakcsqfctt  330
DSSP  ................lLLLL.........LLLLlllllleeeeeeeellllllleeeee


DSSP  ................eeeeelll
Query ................ikfwnvpf  610
ident                         
Sbjct gmdggmsiwdvrslesalkdlkiv  354
DSSP  ellleeeeeehhhhhhhlllllll


No 19: 1JV2A  MOLECULE: INTEGRIN, ALPHA V;                                         

DSSP  lLLEE..EEEELLLLlllllllllleellllleeeeeelleeeeeellllllleeellll
Query sEFSQ..TALFPSLPrtargtavvlgntpagdkiqycngtsvytvpvgsltdteiytehs   58
ident         |                                                   
Sbjct fNLDVdsPAEYSGPE.............................................   15
DSSP  lLLLLllLEEEELLL.............................................


DSSP  lleeeeeellllleeeeeellleeeeeellllllleeeeeellllleeeeeellllleee
Query hqttvaktspsgyycasgdvhgnvriwdttqtthilkttipvfsgpvkdiswdseskria  118
ident                                                             
Sbjct ............................................................   15
DSSP  ............................................................


DSSP  eeelllllleeeeelllllllllllllllleeeeeelllllleeeeeelllleeeeelll
Query avgegrerfghvflfdtgtsngnltgqaramnsvdfkpsrpfriisgsddntvaifegpp  178
ident                                                             
Sbjct ............................................................   15
DSSP  ............................................................


DSSP  leeeeeelllllleeeeeellllleeeeeelllleeeeellllleeeeelllllllllll
Query fkfkstfgehtkfvhsvrynpdgslfastggdgtivlyngvdgtktgvfeddslknvahs  238
ident                                                             
Sbjct ............................................................   15
DSSP  ............................................................


DSSP  lleeeeeellllleeeeeellleeeeeelllleeeeeeellllhhhleeeeeeelleeee
Query gsvfgltwspdgtkiasasadktikiwnvatlkvektipvgtriedqqlgiiwtkqalvs  298
ident                                                             
Sbjct ............................................................   15
DSSP  ............................................................


DSSP  eelllleeeeelllleeeeeelllLLLE.EEEEELLL....lLEEEEEELL.........
Query isangfinfvnpelgsidqvryghNKAI.TALSSSAD....gKTLFSADAE.........  344
ident                               |             |               
Sbjct ........................GSYFgFAVDFFVPsassrMFLLVGAPKanttqpgiv   51
DSSP  ........................LLLLlLLEEEELLlllllLEEEEEELLlllllllll


DSSP  ..LLEEEEELL.LLLEEELLLL...............llLLLE.EEEEELLlLLEEEEEL
Query ..GHINSWDIS.TGISNRVFPD...............vhATMI.TGIKTTSkGDLFTVSW  385
ident   |     | | |        |                                      
Sbjct egGQVLKCDWSsTRRCQPIEFDatgnrdyakddplefksHQWFgASVRSKQ.DKILACAP  110
DSSP  llLEEEEEELLlLLLLLLLLLLllllleeelleeleellLLLLlLEEEELL.LLEEEEEL


DSSP  L..............LEEEEELLllllllhHHLEEEEL............LLLE.EEEEE
Query D..............DHLKVVPAggsgvdsSKAVANKL............SSQP.LGLAV  418
ident                                | |                  |       
Sbjct LyhwrtemkqerepvGTCFLQDG.......TKTVEYAPcrsqdidadgqgFCQGgFSIDF  163
DSSP  LleelllllllleelLEEEEELL.......LLLEEELLllllllllllllLLLLlLEEEL


DSSP  LLLlLLEEEEEL......LEEEEEELLE................EEEEE......lLLLE
Query SADgDIAVAACY......KHIAIYSHGK................LTEVP......iSYNS  450
ident     |                                                       
Sbjct TKA.DRVLLGGPgsfywqGQLISDQVAEivskydpnvysikynnQLATRtaqaifdDSYL  222
DSSP  LLL.LLLEEEELlhhhhlLEEEEELHHHhlllllllllllllllEEELLlllhhhlLLLL


DSSP  .EEEEELL....LLLEEEEEELL.....LEEEEEEEEllEEEEEEEEELL....LLEEEE
Query .SCVALSN....DKQFVAVGGQD.....SKVHVYKLSgaSVSEVKTIVHP....AEITSV  496
ident    ||              |          |  |       |                ||
Sbjct gYSVAVGDfngdGIDDFVSGVPRaartlGMVYIYDGK..NMSSLYNFTGEqmaaYFGFSV  280
DSSP  lLEEEEELllllLLLEEEEEELLhhhhlLEEEEEELL..LLLEEEEEELLllllLLLLEE


DSSP  EELL....LLLEEEEEELL.............LLEEEEEHH..HLLEELlllLLLLL..L
Query AFSN....NGAFLVATDQS.............RKVIPYSVA..NNFELAhtnSWTFH..T  535
ident |         |                       |          |              
Sbjct AATDingdDYADVFIGAPLfmdrgsdgklqevGQVSVSLQRasGDFQTT...KLNGFevF  337
DSSP  EEELllllLLLEEEEEELLleeellllleeelLEEEEEEELllLLEEEE...LLLLLllL


DSSP  LLE.EEEEELLL.....lLEEEEEELL......LLEEEEELL...LLLLLLEEElLLLL.
Query AKV.ACVSWSPD.....nVRLATGSLD......NSVIVWNMN...KPSDHPIIIkGAHA.  579
ident |          |         |             |   |            |       
Sbjct ARFgSAIAPLGDldqdgfNDIAIAAPYggedkkGIVYIFNGRstgLNAVPSQIL.EGQWa  396
DSSP  LLLlLLLLLLLLllllllLLLLEEELLllhhhlLEEELLLEElleELLLLLLEE.ELLLl


DSSP  ....LLLE.EEEEEEE......LLEEEEEEL.LLLEEEEELLL.................
Query ....MSSV.NSVIWLN......ETTIVSAGQ.DSNIKFWNVPF.................  610
ident       |   |                                                 
Sbjct arsmPPSFgYSMKGATdidkngYPDLIVGAFgVDRAILYRARPvitvnaglevypsilnq  456
DSSP  llllLLLLlLEEELLLllllllLLEEEEEELlLLEEEEEELLLeeeeelleeellleell


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct dnktcslpgtalkvscfnvrfclkadgkgvlprklnfqvellldklkqkgairralflys  516
DSSP  llllllllllllllleeeeeeeeeeellllllllllleeeeeelllllllllllleelll


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct rspshsknmtisrgglmqceeliaylrdesefrdkltpitifmeyrldyrtaadttglqp  576
DSSP  llleeeeellllllllleeeeeeeelllhhhllllllleeeeeeeellllllllllllll


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct ilnqftpanisrqahilldcgednvckpklevsvdsdqkkiyigddnpltlivkaqnqge  636
DSSP  eelllllleelleeeellllllllllllleeeeelllllleelllleeeeeeeeeeelll


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct gayeaelivsiplqadfigvvrnnealarlscafktenqtrqvvcdlgnpmkagtqllag  696
DSSP  llllleeeeelllllleeeelllllllllllleeeelllleeeeeellllllllllllee


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct lrfsvhqqsemdtsvkfdlqiqssnlfdkvspvvshkvdlavlaaveirgvsspdhvflp  756
DSSP  eeeeelllllllleeeeeeeeellllllllllleeeeeeeelllleeeeeeellleeell


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct ipnwehkenpeteedvgpvvqhiyelrnngpssfskamlhlqwpykynnntllyilhydi  816
DSSP  llllllllllllhhhhlleeeeeeeeeellllllleeeeeeeeeeeelleellllleeee


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct dgpmnctsdmeinplrikissldihtlgcgvaqclkivcqvgrldrgksailyvksllwt  876
DSSP  elleeeeellllllllllllllllllllllllleeeeeeeelllllleeeeeeeeeelll


DSSP  ...................................................
Query ...................................................  610
ident                                                    
Sbjct etfmnkenqnhsyslkssasfnviefpyknlpieditnstlvttnvtwgiq  927
DSSP  lllllllllllllllleeeeeeeeelllllllllleeeeeeelleeellll


No 20: 1NEXB  MOLECULE: CENTROMERE DNA-BINDING PROTEIN COMPLEX CBF3                

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct lkrdlitslpfeislkifnylqfediinslgvsqnwnkiirkstslwkkllisenfvspk   60
DSSP  llllhhhhllhhhhhhhhllllhhhhhhhllllhhhhhhhhlllhhhhhhhhhlllllhh


DSSP  .....................................llLEEEeeellllllllllllll
Query .....................................seFSQTalfpslprtargtavvl   23
ident                                                             
Sbjct gfnslnlklsqkypklsqqdrlrlsflenifilknwynpKFVP.................  103
DSSP  hhhhhhhhhhhhlllllhhhhhhhhhhhhhhhhhhhhllLLLL.................


DSSP  eellllleeeeeelleeeeeelllllllEEELLLLL.LEEEEEELllLLEEEEEELLLEE
Query gntpagdkiqycngtsvytvpvgsltdtEIYTEHSH.QTTVAKTSpsGYYCASGDVHGNV   82
ident                                  |     |         |   |      
Sbjct ..........................qrTTLRGHXTsVITCLQFE..DNYVITGADDKXI  135
DSSP  ..........................eeEEEELLLLlLEEEEEEE..LLEEEEEELLLEE


DSSP  EEEELLLllLLEEEEEELLLLLEEEEEELlLLLEEEEEELLllLLEEEEELLLLLLLLLL
Query RIWDTTQttHILKTTIPVFSGPVKDISWDsESKRIAAVGEGreRFGHVFLFDTGTSNGNL  142
ident |  |                | |                    |   |     |      
Sbjct RVYDSIN..KKFLLQLSGHDGGVWALKYA.HGGILVSGSTD..RTVRVWDIKKGCCTHVF  190
DSSP  EEEELLL..LEEEEEEELLLLLEEEEEEE.LLLEEEEEELL..LLEEEEELLLLEEEEEE


DSSP  LLLLLLEEEEEELLL.LLLEEEEEELLLLEEEEELLL............lEEEEEELLLL
Query TGQARAMNSVDFKPS.RPFRIISGSDDNTVAIFEGPP............fKFKSTFGEHT  189
ident  |        |         |  || |||      |               |      | 
Sbjct EGHNSTVRCLDIVEYkNIKYIVTGSRDNTLHVWKLPKdyplvfhtpeenpYFVGVLRGHX  250
DSSP  LLLLLLEEEEEEEEElLEEEEEEEELLLEEEEEELLLllleeelllllllLEEEEEELLL


DSSP  LLEEEEEELllLLEEEEEELLLLEEEEELLLLLEEEEElllllllLLLLLLEEEEEELLL
Query KFVHSVRYNpdGSLFASTGGDGTIVLYNGVDGTKTGVFeddslknVAHSGSVFGLTWSPD  249
ident   |  |     |    |   | |                        |            
Sbjct ASVRTVSGH..GNIVVSGSYDNTLIVWDVAQXKCLYIL.......SGHTDRIYSTIYDHE  301
DSSP  LLEEEEEEE..LLEEEEEELLLLEEEEELLLLEEEEEE.......LLLLLLEEEEEEELL


DSSP  LLEEEEEELLLEEEEEELLLLEEEEEEELLllhHHLEEEEEEELLEEEEEELLLLEEEEE
Query GTKIASASADKTIKIWNVATLKVEKTIPVGtriEDQQLGIIWTKQALVSISANGFINFVN  309
ident      ||| | || ||         |                    |||  | | |    
Sbjct RKRCISASXDTTIRIWDLENGELXYTLQGH...TALVGLLRLSDKFLVSAAADGSIRGWD  358
DSSP  LLEEEEEELLLLEEEEELLLLLEEEEELLL...LLLLLEEEELLLEEEEELLLLEEEEEE


DSSP  LLLLEEEEEELLL..................LLLEeeeeellllleeeeeelllleeeee
Query PELGSIDQVRYGH..................NKAItalsssadgktlfsadaeghinswd  351
ident     |                                                       
Sbjct ANDYSRKFSYHHTnlsaittfyvsdnilvsgSENQ....................fniyn  398
DSSP  LLLLLEEEEEELLlllllleeeellleeeeeELLE....................eeeee


DSSP  llLLLEeellllllllleeeeeellllleeeeellleeeeellllllllhhhleeeelll
Query isTGISnrvfpdvhatmitgikttskgdlftvswddhlkvvpaggsgvdsskavanklss  411
ident    |                                                        
Sbjct lrSGKL......................................................  404
DSSP  llLLLL......................................................


DSSP  leeeeeelllllleeeeelleeeeeelleeeeeelllleeeeeellllleeeeeelllee
Query qplglavsadgdiavaacykhiaiyshgkltevpisynsscvalsndkqfvavggqdskv  471
ident                                                             
Sbjct ............................................................  404
DSSP  ............................................................


DSSP  eeeeeelleeeeeeeeelllleeeeeellllleeeeeelllleeeeehhhlleellllll
Query hvyklsgasvsevktivhpaeitsvafsnngaflvatdqsrkvipysvannfelahtnsw  531
ident                                                             
Sbjct ............................................................  404
DSSP  ............................................................


DSSP  lllllleeeeeellllleeeeeelllleeeeelllllllleeelllllllleeeeeeeel
Query tfhtakvacvswspdnvrlatgsldnsvivwnmnkpsdhpiiikgahamssvnsviwlne  591
ident                                                             
Sbjct ...........................................................v  405
DSSP  ...........................................................l


DSSP  leeeeEELLL....................leeeeelll
Query ttivsAGQDS....................nikfwnvpf  610
ident         |                              
Sbjct hanilKDADQiwsvnfkgktlvaavekdgqsfleildfs  444
DSSP  lllllLLLLEeeeeeeelleeeeeeelllleeeeeeell


No 21: 1R5MA  MOLECULE: SIR4-INTERACTING PROTEIN SIF2;                             

DSSP  ..llleeeEEEL.LLLLlllllllllEELLLLL.EEEEEEL.LEEEEE...ellllLLLE
Query ..sefsqtALFP.SLPRtargtavvlGNTPAGD.KIQYCNG.TSVYTV...pvgslTDTE   52
ident                              |       |                      
Sbjct gfvkilkeIVKLdNIVS........sTWNPLDEsILAYGEKnSVARLArivetywkLTII   52
DSSP  llleeleeEEELlLLLE........eEELLLLLlEEEEEELlLEEEEEeeeelleeEEEE


DSSP  EELLLL.....LLEEEEEELLLLLEEEEEELLLEEEEEELLlllLLEEEEEELLLLLEEE
Query IYTEHS.....HQTTVAKTSPSGYYCASGDVHGNVRIWDTTqttHILKTTIPVFSGPVKD  107
ident     |       | |    |  |     |   |  | |  |     |         |   
Sbjct AELRHPfalstNQVTCLAWSHDGNSIVTGVENGELRLWNKT...GALLNVLNFHRAPIVS  109
DSSP  EEEELLlllllLLEEEEEELLLLLEEEEEELLLLEEEEELL...LLEEEEELLLLLLEEE


DSSP  EEELLLLLEEEEEELLllLLEEEEELLLLLLLLLLLLLLLLEEEEEELLLllLEEEEEEL
Query ISWDSESKRIAAVGEGreRFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSrpFRIISGSD  167
ident   |      |                  ||              |               
Sbjct VKWNKDGTHIISMDVE..NVTILWNVISGTVMQHFELKGSLGVDVEWVDD..DKFVIPGP  165
DSSP  EEELLLLLEEEEEELL..LLEEEEELLLLEEEEEELLLLLLLLLLEEEEL..LEEEEELH


DSSP  LLLEEEEELLLLEEEEEELLLLLLEEEEEELLLLLEEEEEELLLLEEEEElLLLL.EEEE
Query DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNgVDGT.KTGV  226
ident                     |         |    |  |   |||               
Sbjct KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH.GGNGnSQNC  224
DSSP  HHLEEEEELLLLLLLEEELLLLLLEEEEEEELLLLEEEEEELLLLEEEEL.LLLLlLLEE


DSSP  ElllllllLLLLLLEEEEEELlLLLEEEEEELLLEEEEEELLLLEEEEEEELLLlhhHLE
Query FeddslknVAHSGSVFGLTWSpDGTKIASASADKTIKIWNVATLKVEKTIPVGTrieDQQ  286
ident |         || |     |     |  | | |     |            |        
Sbjct F.......YGHSQSIVSASWV.GDDKVISCSMDGSVRLWSLKQNTLLALSIVDG...VPI  273
DSSP  E.......LLLLLLEEEEEEE.LLLEEEEEELLLEEEEEELLLLEEEEEEELLL...LLE


DSSP  EEEEEELL..EEEEEELLLLEEEEELLL......LEEEEEEL..................
Query LGIIWTKQ..ALVSISANGFINFVNPEL......GSIDQVRY..................  320
ident                   |  |                                      
Sbjct FAGRISQDgqKYAVAFMDGQVNVYDLKKlnsplpIPLYASYQssqdndyifdlswncagn  333
DSSP  EEEEELLLllEEEEEELLLLEEEEELHHhhlleeLLEEEEELllllllleeeeeelllll


DSSP  ....lLLLLeeeeeellllleeeeeelllleeeeellllleeellllllllleeeeeell
Query ....gHNKAitalsssadgktlfsadaeghinswdistgisnrvfpdvhatmitgiktts  376
ident                                                             
Sbjct kisvaYSLQ...................................................  342
DSSP  eeeeeELLL...................................................


DSSP  llleeeeellleeeeellllllllhhhleeeelllleeeeeelllllleeeeelleeeee
Query kgdlftvswddhlkvvpaggsgvdsskavanklssqplglavsadgdiavaacykhiaiy  436
ident                                                             
Sbjct ............................................................  342
DSSP  ............................................................


DSSP  elleeeeeelllleeeeeellllleeeeeellleeeeeeeelleeeeeeeeelllleeee
Query shgkltevpisynsscvalsndkqfvavggqdskvhvyklsgasvsevktivhpaeitsv  496
ident                                                             
Sbjct ............................................................  342
DSSP  ............................................................


DSSP  eellllleeeeeelllleeeeehhhlleelllllllllllleeeeeellllleeeeeell
Query afsnngaflvatdqsrkvipysvannfelahtnswtfhtakvacvswspdnvrlatgsld  556
ident                                                             
Sbjct ............................................................  342
DSSP  ............................................................


DSSP  lleeeeelllllllleeelllllllleeeeeeeelleeeeeellLLEEeeelll
Query nsvivwnmnkpsdhpiiikgahamssvnsviwlnettivsagqdSNIKfwnvpf  610
ident                                                       
Sbjct ............................................EGSV.vaipg  351
DSSP  ............................................LLEE.eelll


No 22: 1S4UX  MOLECULE: ANTIVIRAL PROTEIN SKI8;                                    

DSSP  llleeeeeelllllllllllllleellllleeeeeelleeeeeelLLLLlLEEE.LLLLL
Query sefsqtalfpslprtargtavvlgntpagdkiqycngtsvytvpvGSLTdTEIY.TEHSH   59
ident                                                   |      |  
Sbjct ............................................kVFIA.TANAgKAHDA   15
DSSP  ............................................lLLLE.EEEElLLLLL


DSSP  LEEEEEELllLLEEEEEELLLEEEEEELLLL.....LLLEeEEEELLLLLEEEEEELLL.
Query QTTVAKTSpsGYYCASGDVHGNVRIWDTTQT.....THILkTTIPVFSGPVKDISWDSE.  113
ident                |    |    ||                  |              
Sbjct DIFSVSAC..NSFTVSCSGDGYLKVWDNKLLdnenpKDKS.YSHFVHKSGLHHVDVLQAi   72
DSSP  LEEEEEEL..LLEEEEEELLLEEEEEELLLLllllhHHHE.EEEELLLLLEEEEEEEEEe


DSSP  ......LLEEEEEELLllLLEEEEELL....LLLLLLLL..lLLLLLEEEEEELLLLLLE
Query ......SKRIAAVGEGreRFGHVFLFD....TGTSNGNL..tGQARAMNSVDFKPSRPFR  161
ident           |                           |                |   |
Sbjct erdafeLCLVATTSFS..GDLLFYRITrkkvIFEKLDLLdsdMKKHSFWALKWGASLSHR  130
DSSP  ellleeEEEEEEEELL..LLEEEEEEEllllEEEEELLLlhhHHLLLEEEEEEELLLLLE


DSSP  EEEEELLLLEEEEELL...............LLEEEEEELLL...LLLEEEEEELLLlLE
Query IISGSDDNTVAIFEGP...............PFKFKSTFGEH...TKFVHSVRYNPDgSL  203
ident         |  |                         |         |  ||       |
Sbjct LVATDVKGTTYIWKFHpfadesnsltlnwspTLELQGTVESPmtpSQFATSVDISER.GL  189
DSSP  EEEEELLLLEEEEEEEllllhhhhhllllllEEEEEEEELLLlllLLLLLEEEELLL.LE


DSSP  EEEEELLLLEEEEELLLLLEEEEELllllllllllLLEEEEEELLLLLEEEEEELL...L
Query FASTGGDGTIVLYNGVDGTKTGVFEddslknvahsGSVFGLTWSPDGTKIASASAD...K  260
ident  |     ||              ||           |      || |   | |       
Sbjct IATGFNNGTVQISELSTLRPLYNFE..........NSIRSVKFSPQGSLLAIAHDSnsfG  239
DSSP  EEEELLLLLEEEEELLLLLEEEEEL..........LLEEEEEELLLLLEEEEEEEElleE


DSSP  EEEEEELLLLEEEEEE..ELLLlhhHLEEEEEEELL..EEEEEELLLLEEEEELLLLEEE
Query TIKIWNVATLKVEKTI..PVGTrieDQQLGIIWTKQ..ALVSISANGFINFVNPELGSID  316
ident  |                                     | |    |   |         
Sbjct CITLYETEFGERIGSLsvFAHS...SWVMSLSFNDSgeTLCSAGWDGKLRFWDVKTKERI  296
DSSP  EEEEEELLLLLEEEEEllLLLL...LLEEEEEELLLllEEEEEELLLEEEEEELLLLEEE


DSSP  EEELLLLLleeeeeellllleeeeeelllleeeeellllleeellllllllleeeeeell
Query QVRYGHNKaitalsssadgktlfsadaeghinswdistgisnrvfpdvhatmitgiktts  376
ident      |                                                      
Sbjct TTLNMHCD....................................................  304
DSSP  EEEELLHH....................................................


DSSP  llleeeeellleeeeellllllllhhhleeeelllleeeeeelllllleeeeelleeeee
Query kgdlftvswddhlkvvpaggsgvdsskavanklssqplglavsadgdiavaacykhiaiy  436
ident                                                             
Sbjct ............................................................  304
DSSP  ............................................................


DSSP  elleeeeeelllleeeeeellllleeeeeellleeeeeeeelleeeeeeeeelllleeee
Query shgkltevpisynsscvalsndkqfvavggqdskvhvyklsgasvsevktivhpaeitsv  496
ident                                                             
Sbjct ............................................................  304
DSSP  ............................................................


DSSP  eellllleeeeeelllleeeeehhhlleelllllllllllleeeeeellllleeeeeell
Query afsnngaflvatdqsrkvipysvannfelahtnswtfhtakvacvswspdnvrlatgsld  556
ident                                                             
Sbjct ............................................................  304
DSSP  ............................................................


DSSP  lleeeeelllllllleeelLLLLLLleeeeeeeelleeeeeELLL...............
Query nsvivwnmnkpsdhpiiikGAHAMSsvnsviwlnettivsaGQDS...............  601
ident                                                             
Sbjct ................dieIEEDIL..........avdehgDSLAepgvfdvkflkkgwr  338
DSSP  ................hllLHHHLL..........llllllLLLLllleeeeeeelllll


DSSP  .........leeeeelll
Query .........nikfwnvpf  610
ident                   
Sbjct sneslccvcldrsirwfr  356
DSSP  llleeeeeellleeeeel


No 23: 2B5LA  MOLECULE: DAMAGE-SPECIFIC DNA BINDING PROTEIN 1;                     

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct msynyvvtaqkptavngcvtghftsaedlnlliakntrleiyvvtaeglrpvkevgmygk   60
DSSP  llleeeeeeelllllleeeeelllllllleeeeellleeeeeeelllleeeeeeeellll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct iavmelfrpkgeskdllfiltakynacileykqsgesidiitrahgnvqdrigrpsetgi  120
DSSP  eeeeeeelllllllleeeeeellleeeeeeeeelllleeeeeeeeeelllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct igiidpecrmiglrlydglfkvipldrdnkelkafnirleelhvidvkflygcqapticf  180
DSSP  eeeellllleeeeelllleeeeeelllllllllleeeellllleeeeeellllllleeee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct vyqdpqgrhvktyevslrekefnkgpwkqenveaeasmviavpepfggaiiigqesityh  240
DSSP  eeeelleeeeeeeeeelllleellllllllllllllleeeellllllleeeelllleeee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct ngdkylaiappiikqstivchnrvdpngsryllgdmegrlfmlllekeeqmdgtvtlkdl  300
DSSP  elleeeeellhhhhllllleeeeeelleeeeeeelllleeeeeeeeeeellllleeeeee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct rvellgetsiaecltyldngvvfvgsrlgdsqlvklnvdsneqgsyvvametftnlgpiv  360
DSSP  eeeeeeellleeeeeelllleeeeeelllleeeeeelllllllllleeeeeeelllllee


DSSP  .................................lLLEEEEEELLlllllllllllleell
Query .................................sEFSQTALFPSlprtargtavvlgntp   27
ident                                        |                    
Sbjct dmcvvdlerqgqgqlvtcsgafkegslriirngiGIHEHASIDL................  404
DSSP  eeeelllllllllleeeeellhhhleeeeeelllLEEEEEEELL................


DSSP  llleeeeeelleeeeeellllllleeelllllleeeeeellllleeeeeellleeeeeel
Query agdkiqycngtsvytvpvgsltdteiytehshqttvaktspsgyycasgdvhgnvriwdt   87
ident                                                             
Sbjct ............................................................  404
DSSP  ............................................................


DSSP  lllllleeeeeellllleeeeeellllleeeeeelllllleeeeelllllllllllllll
Query tqtthilkttipvfsgpvkdiswdseskriaavgegrerfghvflfdtgtsngnltgqar  147
ident                                                             
Sbjct ............................................................  404
DSSP  ............................................................


DSSP  leeeeeelllllleeeeeelllleeeeelllleeeeeelllllleeeeeellllleeeee
Query amnsvdfkpsrpfriisgsddntvaifegppfkfkstfgehtkfvhsvrynpdgslfast  207
ident                                                             
Sbjct ............................................................  404
DSSP  ............................................................


DSSP  elllleeeeellllleeeeellllllllllllleeeeeellllleeeeeellleeeeeel
Query ggdgtivlyngvdgtktgvfeddslknvahsgsvfgltwspdgtkiasasadktikiwnv  267
ident                                                             
Sbjct ............................................................  404
DSSP  ............................................................


DSSP  llleeeeeeellllhhhleeeeeeelleeeeeelllleeeeelllleeeeeellllLLEE
Query atlkvektipvgtriedqqlgiiwtkqalvsisangfinfvnpelgsidqvryghnKAIT  327
ident                                                           | 
Sbjct ........................................................PGIK  408
DSSP  ........................................................LLLL


DSSP  EEEELL......LLLEEEEEELLlLEEEEEL..LLLLEEELlLLLL.LLLEEEEEELLLL
Query ALSSSA......DGKTLFSADAEgHINSWDI..STGISNRVfPDVH.ATMITGIKTTSKG  378
ident  |             ||                                           
Sbjct GLWPLRsdpnreTYDTLVLSFVG.QTRVLMLngEEVEETEL.MGFVdDQQTFFCGNVAHQ  466
DSSP  EEEEELllllllLLLEEEEELLL.LEEEEEEelLEEEEELL.LLLLlLLLEEEEEEELLL


DSSP  LEEEEELlLEEEEELLLLlllLHHHlEEEEL..LLLEEEEEELllLLLEEEEELLEEEEE
Query DLFTVSWdDHLKVVPAGGsgvDSSKaVANKL..SSQPLGLAVSadGDIAVAACYKHIAIY  436
ident  |           |               |                   | |        
Sbjct QLIQITS.ASVRLVSQEP...KALV.SEWKEpqAKNISVASCN..SSQVVVAVGRALYYL  519
DSSP  EEEEEEL.LLEEEELLLL...LLEE.EEELLllLLLLLEEEEL..LLEEEEEELLEEEEE


DSSP  E....LLEE.EEEELLLLEEEEEELLL......LLEEEEEELL.LEEEEEEEEllEEEEE
Query S....HGKL.TEVPISYNSSCVALSND......KQFVAVGGQD.SKVHVYKLSgaSVSEV  484
ident                     |                | |          ||   |    
Sbjct QihpqELRQiSHTEMEHEVACLDITPLgdsnglSPLCAIGLWTdISARILKLP..SFELL  577
DSSP  EeellEEEEeEEEELLLLEEEEELLLLllllllLLEEEEEELLlLEEEEEELL..LLEEE


DSSP  EEEELL..LLEEEEEELL..llLEEEEEELLLLEEEEEHH...hLLEELLllLLLLLLLL
Query KTIVHP..AEITSVAFSN..ngAFLVATDQSRKVIPYSVA...nNFELAHtnSWTFHTAK  537
ident             |           |                             |  |  
Sbjct HKEMLGgeIIPRSILMTTfessHYLLCALGDGALFYFGLNietgLLSDRK..KVTLGTQP  635
DSSP  EEEELLllLLEEEEEEEEllllEEEEEEELLLEEEEEEELllllLEEEEE..EEELLLLL


DSSP  EeEEEELLL..LLEEEEEELLllEEEEEL..LLLLllLEEELLLllllLEEEEEEEE...
Query VaCVSWSPD..NVRLATGSLDnsVIVWNM..NKPSdhPIIIKGAhamsSVNSVIWLN...  590
ident                   |      |      |                ||    ||   
Sbjct T.VLRTFRSlsTTNVFACSDR..PTVIYSsnHKLV..FSNVNLK....EVNYMCPLNsdg  686
DSSP  L.EEEEELLllLLEEEEELLL..LEEEEEllLLEE..EEELLLL....LLLEEEEELlll


DSSP  .lLEEEEEELLlLEEEEELLL.......................................
Query .eTTIVSAGQDsNIKFWNVPF.......................................  610
ident        |                                                    
Sbjct ypDSLALANNS.TLTIGTIDEiqklhirtvplyesprkicyqevsqcfgvlssrievqdt  745
DSSP  llLEEEEELLL.LEEEEEELLlllleeeeeellleeeeellllllleeeeeeeeeeelll


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct sggttalrpsastqalsssvsssklfsstsfgeevevhnlliidqhtfevlhahqflqne  805
DSSP  llllllllllllllllllllllllllllllllleeeeeeeeeeellllleeeeeelllle


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct yalslvscklgkdpntyfivgtamvypeeaepkqgrivvfqysdgklqtvaekevkgavy  865
DSSP  eeeelleeeelleeeeeeeeeeeelllllllllleeeeeeelllllleeeelleelllll


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct smvefngkllasinstvrlyewttekdvrtecnhynnimalylktkgdfilvgdlmrsvl  925
DSSP  eeeeelleeeeelllleeeeeellllleeeeeeellllleeeeeeelleeeeeellllee


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct llaykpmegnfeeiardfnpnwmsaveildddnflgaenafnlfvcqkdsaattdeerqh  985
DSSP  eeeeelllleeeeeeelllllleeeeeeeelleeeeeellleeeeeeellllllllllll


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct lqevglfhlgefvnvfchgslvmqnlgstptqgsvlfgtvngmiglvtslseswynllld 1045
DSSP  eeeeeeeelllleeeeeellllllllllllleeeeeeeelllleeeeeellhhhhhhhhh


DSSP  ............................................................
Query ............................................................  610
ident                                                             
Sbjct mqnrlnkviksvgkiehsfwrsfhterktepatgfidgdliesfldisrpkmqevvanlq 1105
DSSP  hhhhhhhhllllllllhhhhlleelllleelllleeehhhhhhhhhllhhhhhhhhllle


DSSP  ...........................
Query ...........................  610
ident                            
Sbjct yddgsgmkreataddlikvveeltrih 1132
DSSP  ellllllleellhhhhhhhhhhhhlll


No 24: 1JOFA  MOLECULE: CARBOXY-CIS,CIS-MUCONATE CYCLASE;                          

DSSP  ...........................llleeeEEEL.LLLLllllllLLLEELLLLLEE
Query ...........................sefsqtALFP.SLPRtargtaVVLGNTPAGDKI   32
ident                                     |   |                  |
Sbjct plhhlxigtwtppgaiftvqfddekltcklikrTEIPqDEPI......SWXTFDHERKNI   54
DSSP  leeeeeeeellllleeeeeeeelllleeeeeeeEELLlLLLL......LEEEELLLLLEE


DSSP  EEEELLEEEEEELLL..LLLLEEELLLL...........LLEEEEEELLL.LLEEEEEEL
Query QYCNGTSVYTVPVGS..LTDTEIYTEHS...........HQTTVAKTSPS.GYYCASGDV   78
ident             | |      |                              |       
Sbjct YGAAXKKWSSFAVKSptEIVHEASHPIGghprandadtnTRAIFLLAAKQpPYAVYANPF  114
DSSP  EEEELLEEEEEEEEEllEEEEEEEEELLllhhhhlllllLEEEEEEELLLlLLLEEEEEE


DSSP  ...LLEEEEEELLL..llLLEEEEEELL.LLLEEEEEELLLLLEEEEEELLLlLLEEEEE
Query ...HGNVRIWDTTQ..ttHILKTTIPVF.SGPVKDISWDSESKRIAAVGEGReRFGHVFL  132
ident     |                                 |                     
Sbjct ykfAGYGNVFSVSEtgklEKNVQNYEYQeNTGIHGXVFDPTETYLYSADLTA.NKLWTHR  173
DSSP  lllLLEEEEEEELLllleEEEEEEEELLlLLLEEEEEELLLLLEEEEEELLL.LEEEEEE


DSSP  LL...LLLLLLLLLLLL..LLEEEEEELlLLLLEEEEEEL.LLLEEEEEL....LLLEEE
Query FD...TGTSNGNLTGQA..RAMNSVDFKpSRPFRIISGSD.DNTVAIFEG....PPFKFK  182
ident           |             |                 |                 
Sbjct KLasgEVELVGSVDAPDpgDHPRWVAXH.PTGNYLYALXEaGNRICEYVIdpatHXPVYT  232
DSSP  ELlllLEEEEEEEELLLllLLEEEEEEL.LLLLEEEEEELlLLEEEEEEEllllLLEEEE


DSSP  .EEELLLL..............LLEEEEEELLLLLEEEEEELL......LLEEEEEL...
Query .STFGEHT..............KFVHSVRYNPDGSLFASTGGD......GTIVLYNG...  218
ident    |                             |               | |        
Sbjct hHSFPLIPpgipdrdpetgkglYRADVCALTFSGKYXFASSRAnkfelqGYIAGFKLrdc  292
DSSP  eEEEELLLllllllllllllllEEEEEEEELLLLLEEEEEEEEllllllLEEEEEEElll


DSSP  LLLL.EEEEElllllllLLLLLL..EEEEEELL.LLLEEEEEELL.LEEEEEELL..LLE
Query VDGT.KTGVFeddslknVAHSGS..VFGLTWSP.DGTKIASASAD.KTIKIWNVA..TLK  271
ident                                 |      |          |       | 
Sbjct GSIEkQLFLS.......PTPTSGghSNAVSPCPwSDEWXAITDDQeGWLEIYRWKdeFLH  345
DSSP  LLEEeEEEEE.......ELLLLLllLLLEEELLlLLLEEEEELLLlLEEEEEEEEllEEE


DSSP  EEEEEELLllHHHLEEEEEEELleeeeeelllleeeeelllleeeeeelllllleeeeee
Query VEKTIPVGtrIEDQQLGIIWTKqalvsisangfinfvnpelgsidqvryghnkaitalss  331
ident                   ||                                        
Sbjct RVARVRIP..EPGFGXNAIWYD......................................  365
DSSP  EEEEEELL..LLLEEEEEEEEL......................................


DSSP  llllleeeeeelllleeeeellllleeellllllllleeeeeellllleeeeellleeee
Query sadgktlfsadaeghinswdistgisnrvfpdvhatmitgikttskgdlftvswddhlkv  391
ident                                                             
Sbjct ............................................................  365
DSSP  ............................................................


DSSP  ellllllllhhhleeeelllleeeeeelllllleeeeelleeeeeelleeeeeellllee
Query vpaggsgvdsskavanklssqplglavsadgdiavaacykhiaiyshgkltevpisynss  451
ident                                                             
Sbjct ............................................................  365
DSSP  ............................................................


DSSP  eeeellllleeeeeellleeeeeeeelleeeeeeeeelllleeeeeellllleeeeeell
Query cvalsndkqfvavggqdskvhvyklsgasvsevktivhpaeitsvafsnngaflvatdqs  511
ident                                                             
Sbjct ............................................................  365
DSSP  ............................................................


DSSP  lleeeeehhhlleelllllllllllleeeeeellllleeeeeelllleeeeellllllll
Query rkvipysvannfelahtnswtfhtakvacvswspdnvrlatgsldnsvivwnmnkpsdhp  571
ident                                                             
Sbjct ............................................................  365
DSSP  ............................................................


DSSP  eeelllllllleeeeeeeelleeeeeelllleeeeelll
Query iiikgahamssvnsviwlnettivsagqdsnikfwnvpf  610
ident                                        
Sbjct .......................................  365
DSSP  .......................................


No 25: 2CN2A  MOLECULE: BETA-1,4-XYLOGLUCAN HYDROLASE;                             

DSSP  ...LLLEEEEEE..lLLLLLlllllLLLEEL.LLLLEEEEEE.LLEEEEEELLLllLLEE
Query ...SEFSQTALF..pSLPRTargtaVVLGNT.PAGDKIQYCN.GTSVYTVPVGSltDTEI   53
ident                                    | |         |            
Sbjct vtsVPYKWDNVViggGGGFX.....PGIVFNeTEKDLIYARAdIGGAYRWDPST.eTWIP   54
DSSP  leeLLEEEEEELlllLLLLL.....LEEEELlLLLLLEEEELlLLLEEEEELLL.lEEEE


DSSP  EL.......lLLLLEEEEEELL.LLLEEEEEEL.........LLEEEEEELLlllLLEEe
Query YT.......eHSHQTTVAKTSP.SGYYCASGDV.........HGNVRIWDTTqttHILKt   96
ident                    | |                     |                
Sbjct LLdhfqxdeySYYGVESIATDPvDPNRVYIVAGxytndwlpnXGAILRSTDR..gETWE.  111
DSSP  LLllllhhhhHHHLEEEEEELLlLLLLEEEEELlllllllllLLEEEEELLL..lLLLE.


DSSP  EEELLLLLE.........EEEEELL.LLLEEEEEELLLlLLEEEEE.LLLLlLLLL.lLL
Query TIPVFSGPV.........KDISWDS.ESKRIAAVGEGReRFGHVFL.FDTGtSNGN.lTG  144
ident                        |                                    
Sbjct KTILPFKXGgnxpgrsxgERLAIDPnDNRILYLGTRCG.NGLWRSTdYGVT.WSKVesFP  169
DSSP  EEELLLLLLlllllllllLLEEELLlLLLLEEEELLLL.LLEEEELlLLLL.LEELllLL


DSSP  LLL...LEEEEEELLLLL......LEEEEEELLL..LEEEEELLlLEEEEEE..LLLLLL
Query QAR...AMNSVDFKPSRP......FRIISGSDDN..TVAIFEGPpFKFKSTF..GEHTKF  191
ident           | |  |          |  |  |                           
Sbjct NPGtiiGVVWVVFDKSSStpgnptKTIYVGVADKneSIYRSTDG.GVTWKAVpgQPKGLL  228
DSSP  LLLlllLEEEEEELHHHLllllllLLEEEEELLLllLEEEELLL.LLLLEELllLLLLLE


DSSP  EEEEEELLLlLEEEEEELL..LLEEEEELLLlLEEEEELLLLLLLlllLLLEEEEEELL.
Query VHSVRYNPDgSLFASTGGD..GTIVLYNGVDgTKTGVFEDDSLKNvahSGSVFGLTWSP.  248
ident  |             | ||  |     |                         ||     
Sbjct PHHGVLASN.GXLYITYGDgkGQVWKFNTRT.GEWIDITPIPYSSsdnRFCFAGLAVDRq  286
DSSP  EEEEEELLL.LEEEEEEELllEEEEEEELLL.LLEEELLLLLLLLlllLLEEEEEEELLl


DSSP  LLLEEEEEELL.....LEEEEE.ELLLlEEEEE...........................
Query DGTKIASASAD.....KTIKIW.NVATlKVEKT...........................  275
ident     |   |         |                                         
Sbjct NPDIIXVTSXNawwpdEYIFRStDGGA.TWKNIwewgxyperilhyeidisaapwldwgt  345
DSSP  LLLLEEEEEELlllllLLEEEElLLLL.LLEELeeellllleeeleeeellllhhhhlll


DSSP  ...eelLLLH.HHLEEEEEEELL...EEEEEElLLLEEEE.ELLL......LEEEEEE.l
Query ...ipvGTRI.EDQQLGIIWTKQ...ALVSISaNGFINFV.NPEL......GSIDQVR.y  320
ident                  |                  |    |           |      
Sbjct ekqlpeINPKlGWXIGDIEIDPFnsdRXXYVT.GATIYGCdNLTDwdrggkVKIEVKAtg  404
DSSP  llllllLLLLlLLLLLLEEELLLlllLEEEEL.LLLEEEElLHHHhhhlllEEEEELLll


DSSP  lLLLLEEEEEELLLLLEEEEEELLLLEEEE.ELLLlLEEELllLLLL.LLEEEEEEL..L
Query gHNKAITALSSSADGKTLFSADAEGHINSW.DISTgISNRVfpDVHA.TMITGIKTT..S  376
ident     |   | |   |  | ||          |            |      |||      
Sbjct iEECAVLDLVSPPEGAPLVSAVGDLVGFVHdDLKV.GPKKX..HVPSySSGTGIDYAelV  461
DSSP  lLLLLEEEEELLLLLLLEEEEELLLLLLEElLLLL.LLLLL..LLLLlLEEEEEEELllL


DSSP  LLLEEEEELL.LEEEEELLlllLLLHhhLEEE..ELLL..LEEEEEELLLLLLEEEEE.L
Query KGDLFTVSWD.DHLKVVPAggsGVDSskAVAN..KLSS..QPLGLAVSADGDIAVAAC.Y  430
ident       |               |                      || ||          
Sbjct PNFXALVAKAvKKISFSYD...GGRN..WFQPpnEAPNsvGGGSVAVAADAKSVIWTPeN  516
DSSP  LLLEEEEEELlLLEEEELL...LLLL..LLLLllLLLLllLLLEEEELLLLLLEEEELlL


DSSP  LEEEEEEL..LEEEEEELlLLEEEEEELL.LLLEEEEEElLLEEEEEEEellEEEEEEEE
Query KHIAIYSH..GKLTEVPIsYNSSCVALSN.DKQFVAVGGqDSKVHVYKLsgaSVSEVKTI  487
ident    |                    ||                |                 
Sbjct ASPAVTTDngNSWKVCTNlGXGAVVASDRvNGKKFYAFY.NGKFYISTD.ggLTFTDTKA  574
DSSP  LLLEEELLllLLLEELLLlLLLLEEEELLlLLLLEEEEE.LLEEEEELL.llLLLEELLL


DSSP  .ELLLLEEEEEELL.LLLEEEEEELLLLEEEEEHhhlLEELllLLLLLLlllEEEEEELL
Query .VHPAEITSVAFSN.NGAFLVATDQSRKVIPYSVannFELAhtNSWTFHtakVACVSWSP  545
ident    |                                        |          |    
Sbjct pQLPKSVNKIKAVPgKEGHVWLAAREGGLWRSTD.ggYTFE.kLSNVDT...AHVVGFGK  629
DSSP  lLLLLLLLEEEELLlLLLLEEEELLLLLEEEELL.llLLLE.eLLLLLE...EEEEEEEL


DSSP  L.....LLEEEEEE...llLLEEEEELLlLLLLLEEEL..LLLLlLLEEEEEEE..ELLE
Query D.....NVRLATGS...ldNSVIVWNMNkPSDHPIIIK..GAHAmSSVNSVIWL..NETT  593
ident                                    |                        
Sbjct AapgqdYXAIYITGkidnvLGFFRSDDA.GKTWVRINDdeHGYG.AVDTAITGDprVYGR  687
DSSP  LlllllLLEEEEEEeelleEEEEEELLL.LLLLEELLLllLLLL.LLLLLEEEEllEEEE


DSSP  EEEEELLLLEEEEELLl
Query IVSAGQDSNIKFWNVPf  610
ident    |     |       
Sbjct VYIATNGRGIVYGEPAs  704
DSSP  EEEELLLLLEEEEEELl


No 26: 2J04B  MOLECULE: HYPOTHETICAL PROTEIN YPL007C;                              

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct sardkieriyglnkekllllakvkegfetsvfdfpfkniqpdspyfvcldppckkesayn   60
DSSP  llhhhhhhhhlllhhhhhhhhhhhhhhllllllllhhhhlllllllllllllllllllhh


DSSP  .........lllEEEE............................................
Query .........sefSQTA............................................    7
ident                                                             
Sbjct kvigdknrtvyhEINKtefenmiklrtkrlklligevdaevstgdkiefpvlangkrrgf  120
DSSP  hlllllllllllLLLLhhhhlllllllleeeeeelleeeeeellleeehhhlllllllee


DSSP  ...eelLLLLlllllllLLEELLL......lLEEEEEEL..LEEEEEELL....LLLLLE
Query ...lfpSLPRtargtavVLGNTPA......gDKIQYCNG..TSVYTVPVG....SLTDTE   52
ident                   |                                         
Sbjct iynvggTDIA.......WLNIEENtdigkdiQYLAVAVSqsSCIQIFKMNtstlHCVKVQ  173
DSSP  eeelllLLLL.......LEEELLLlllllleEEEEEEEEllEEEEEEEEEllllLEEEEE


DSSP  EELLlLLLEEE.EEELLLL......LEEEEEELLLEEEEEELLLL.........llLEEE
Query IYTEhSHQTTV.AKTSPSG......YYCASGDVHGNVRIWDTTQT.........thILKT   96
ident      |       |                    |                         
Sbjct TIVH.SFGEVWdLKWHEGChaphlvGCLSFVSQEGTINFLEIIDNatdvhvfkmceKPSL  232
DSSP  EEEE.LLLLEEeEEELLLLllllllLEEEEEELLLLEEEEELLLLllllleeelllLLLE


DSSP  EEELlLLLEEEEEELlLLLEEEEEELLllLLEEEEELLLL.LLLLLLLLLLLLEEEEEEL
Query TIPVfSGPVKDISWDsESKRIAAVGEGreRFGHVFLFDTG.TSNGNLTGQARAMNSVDFK  155
ident |                             |   |                    ||   
Sbjct TLSLaDSLITTFDFL.SPTTVVCGFKN..GFVAEFDLTDPeVPSFYDQVHDSYILSVSTA  289
DSSP  EELLlLLLEEEEEEL.LLLEEEEEELL..LEEEEEELLLLlLLLEEEELLLLLEEEEEEE


DSSP  LL..LLLEEEEEELLLLEEEEELLLLE.EEEEELLLLLL.EEEEEELLLLLEEEEEELLL
Query PS..RPFRIISGSDDNTVAIFEGPPFK.FKSTFGEHTKF.VHSVRYNPDGSLFASTGGDG  211
ident  |            |    ||        | |           | | |         |  
Sbjct YSdfEDTVVSTVAVDGYFYIFNPKDIAtTKTTVSRFRGSnLVPVVYCPQIYSYIYSDGAS  349
DSSP  LLllLLLEEEEEELLLEEEEELHHHHHhHLEEEEELLLLlLLLEEEELLLLEEEEELLLL


DSSP  LEEEEELLLLLEEEEELlllllllLLLLLEEEEEELLLLLEEEEEELLLEEEEEELLL..
Query TIVLYNGVDGTKTGVFEddslknvAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT..  269
ident                                    |         |||    | | |   
Sbjct SLRAVPSRAAFAVHPLV.......SRETTITAIGVSRLHPMVLAGSADGSLIITNAARrl  402
DSSP  EEEEEELLLLLLLEEEE.......ELLLLEEEEELLLLLLLLEEEELLLEEELLLLLLll


DSSP  ....lEEEEEEELLL................lHHHLEEEEEEELL.....EEEEEELLLL
Query ....lKVEKTIPVGT................rIEDQQLGIIWTKQ.....ALVSISANGF  304
ident      |                                   |                | 
Sbjct lhgiqKSLRLWKWDYsikddkyridssyevypHGINITCTKWNETsaggkCYAFSNSAGL  462
DSSP  lllllLLLEEEELLLllllleeeellllllllLLLLLLLEEELLLlllllEEEEELLLLE


DSSP  EEEEELLLleeeeeelllllleeeeeellllleeeeeelllleeeeellllleeelllll
Query INFVNPELgsidqvryghnkaitalsssadgktlfsadaeghinswdistgisnrvfpdv  364
ident        |                                                    
Sbjct LTLEYLSL....................................................  470
DSSP  EEEEELLL....................................................


DSSP  lllleeeeeellllleeeeellleeeeellllllllhhhleeeelllleeeeeellllll
Query hatmitgikttskgdlftvswddhlkvvpaggsgvdsskavanklssqplglavsadgdi  424
ident                                                             
Sbjct ............................................................  470
DSSP  ............................................................


DSSP  eeeeelleeeeeelleeeeeelllleeeeeellllleeeeeellleeeeeeeelleeeee
Query avaacykhiaiyshgkltevpisynsscvalsndkqfvavggqdskvhvyklsgasvsev  484
ident                                                             
Sbjct ............................................................  470
DSSP  ............................................................


DSSP  eeeelllleeeeeellllleeeeeelllleeeeehhhlleelllllllllllleeeeeel
Query ktivhpaeitsvafsnngaflvatdqsrkvipysvannfelahtnswtfhtakvacvsws  544
ident                                                             
Sbjct ............................................................  470
DSSP  ............................................................


DSSP  lllleeeeeelllleeeeelllllllleeelllllllleeeeeeeelleeeeeellllee
Query pdnvrlatgsldnsvivwnmnkpsdhpiiikgahamssvnsviwlnettivsagqdsnik  604
ident                                                             
Sbjct ............................................................  470
DSSP  ............................................................


DSSP  eeelll
Query fwnvpf  610
ident       
Sbjct .....e  471
DSSP  .....l


No 27: 2EBSA  MOLECULE: OLIGOXYLOGLUCAN REDUCING END-SPECIFIC                      

DSSP  llLEEEEEE.LLLLLLlllllLLLEELL.LLLEEEEEE.LLEEEEEELLLLlLLEEEL..
Query seFSQTALF.PSLPRTargtaVVLGNTP.AGDKIQYCN.GTSVYTVPVGSLtDTEIYT..   55
ident                            |   |           |    |           
Sbjct ..YEFKNVAiGGGGYI.....TGIVAHPkTKDLLYARTdIGGAYRWDAGTS.KWIPLNdf   52
DSSP  ..LEEEELLlLLLLLE.....EEEEELLlLLLLEEEEElLLLEEEEELLLL.EEEELLll


DSSP  .....llLLLEEEEEELL.LLLEEEEEEL......LLEEEEEELLlllLLEEEEEELLLL
Query .....ehSHQTTVAKTSP.SGYYCASGDV......HGNVRIWDTTqttHILKTTIPVFSG  103
ident           |      |                                       |  
Sbjct ieaqdmnIMGTESIALDPnNPDRLYLAQGryvgdeWAAFYVSEDR..gQSFTIYESPFPM  110
DSSP  llhhhhhHLLEEEEEEELlEEEEEEEEELllllllLLEEEEELLL..lLEEEEEELLLLL


DSSP  L........eEEEEELL.LLLEEEEEELLllLLEEEEE.LLLLlLLLL.lLLLLL....L
Query P........vKDISWDS.ESKRIAAVGEGreRFGHVFL.FDTGtSNGN.lTGQAR....A  148
ident                    |                                 |      
Sbjct GandmgrnngERLAVNPfNSNEVWMGTRT..EGIWKSSdRAKT.WTNVtsIPDAFtngiG  167
DSSP  LlllllllllLLEEELLlLLLLEEEELLL..LLEEEELlLLLL.LEELllLLLLLllllL


DSSP  EEEEEELLLLLLEEEEEELLL.LEEEEELLlLEEEEEE.LLLL.................
Query MNSVDFKPSRPFRIISGSDDN.TVAIFEGPpFKFKSTF.GEHT.................  189
ident   || | | |   |                         |                    
Sbjct YTSVIFDPERNGTIYASATAPqGMYVTHDG.GVSWEPVaGQPSswlnrttgafpdkkpas  226
DSSP  EEEEEELLLLLLLEEEEELLLlLEEEELLL.LLLLEELlLLLLlllhhhhhlllllllll


DSSP  ..LLEEEEEELllLLEEEEEELL.........LLEEEEELlllLEEEEE.LLLLL.....
Query ..KFVHSVRYNpdGSLFASTGGD.........GTIVLYNGvdgTKTGVF.EDDSL.....  232
ident        |           |  |         |     |                     
Sbjct iaPQPMKVALT..PNFLYVTYADypgpwgvtfGEVWRQNR.tsGAWDDItPRVGNsspap  283
DSSP  llLEEEEEEEL..LLEEEEEEELlllllllllEEEEEEEL.llLLEEELlLLLLLeelll


DSSP  ..lllllLLLEEEEEELL.LLLEEEEEELL.......LEEEEEELLLLEEEEEEE.....
Query ..knvahSGSVFGLTWSP.DGTKIASASAD.......KTIKIWNVATLKVEKTIP.....  277
ident         |   ||               |         |     |              
Sbjct ynnqtfpAGGFCGLSVDAtNPNRLVVITLDrdpgpalDSIYLSTDAGATWKDVTQlssps  343
DSSP  lllllllLLEEEEEEELLlLLLLEEEEEELlllllllLLEEEELLLLLLEEEHHHhllll


DSSP  ..........................................llLLHHHLEEEEEEELL.
Query ..........................................vgTRIEDQQLGIIWTKQ.  294
ident                                             |               
Sbjct nlegnwghptnaarykdgtpvpwldfnngpqwggygaphgtpglTKFGWWMSAVLIDPFn  403
DSSP  lllllleeehhhlllllllllhhhhhhhllllllllllllllleEELLLLLLLEEEELLe


DSSP  ..EEEEEElLLLEEEE.ELLLL.....EEEEEE..llLLLLEEEEEELLLLLEEEEEELL
Query ..ALVSISaNGFINFV.NPELG.....SIDQVR..ygHNKAITALSSSADGKTLFSADAE  344
ident    |        |                           ||  | |   |  | |    
Sbjct peHLMYGT.GATIWATdTLSRVekdwaPSWYLQidgiEENAILSLRSPKSGAALLSGIGN  462
DSSP  eeEEEEEL.LLLEEEElLHHHHhhlllLLEEELllllLLLLEEEEELLLLLLLEEEEELL


DSSP  LLEEEE.ELLLlLEEELLlLLLLLLEEEEEEL..LLLLEEEEELL........lEEEEEL
Query GHINSW.DISTgISNRVFpDVHATMITGIKTT..SKGDLFTVSWD........dHLKVVP  393
ident        |                    |                               
Sbjct ISGMKHdDLTK.PQKMFG.APQFSNLDSIDAAgnFPNVVVRAGSSgheydsacaRGAYAT  520
DSSP  LLLLEElLLLL.LLLLLL.LLLLLEEEEEEELllLLLLEEEEEELlllllllllLEEEEL


DSSP  LlllLLLHhhLEEE.ELLLL......EEEEEELLLLLLEEEEELL.....EEEEEEL..L
Query AggsGVDSskAVAN.KLSSQ......PLGLAVSADGDIAVAACYK.....HIAIYSH..G  439
ident     |                         || | |   |                    
Sbjct D..gGDAW..TIFPtCPPGMnashyqGSTIAVDASGSQIVWSTKLdeqasGPWYSHDygK  576
DSSP  L..lLLLE..EELLlLLLLLllllllLLEEEELLLLLLEEEELLLlllllLLEEELLllL


DSSP  EEEEE..eLLLLEEEEEELL.LLLEEEEEElLLEEEEEEEellEEEEeEEEE..LLLLEE
Query KLTEV..pISYNSSCVALSN.DKQFVAVGGqDSKVHVYKLsgaSVSEvKTIV..HPAEIT  494
ident                |                 |  |                       
Sbjct TWSVPagdLKAQTANVLSDKvQDGTFYATD.GGKFFVSTD.ggKSYA.AKGAglVTGTSL  633
DSSP  LLLLLeelLLLLLLLEEELLlLLLLEEEEE.LLEEEEELL.llLEEE.ELLLllLLLLLL


DSSP  EEEELL.LLLEEEEEELLLLEEEEEHhhLLEELLlLLLLlllllEEEEEELLL..LLEEE
Query SVAFSN.NGAFLV