DaliLite: Structural Neighbours

Query: 1NKQE MOLECULE: HYPOTHETICAL 28.8 KDA PROTEIN IN PSD1-SKO1

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1NKQ-A 44.3  0.4  246   247  100   HYPOTHETICAL 28.8 KDA PROTEIN IN PSD1-SKO1                 "         
   2:  2DFU-A 25.7  2.2  201   251   33   PROBABLE 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE               "         
   3:  1NR9-A 25.4  2.0  198   211   35   PROTEIN YCGM;                                              "         
   4:  1GTT-A 22.1  2.9  192   421   27   4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL            "         
   5:  1QCO-A 18.8  2.7  207   416   19   FUMARYLACETOACETATE HYDROLASE;                             "         
   6:  1SV6-A 15.7  3.1  187   261   20   2-KETO-4-PENTENOATE HYDRATASE;                             "         
   7:  2EB4-A 15.5  3.1  188   261   18   2-OXO-HEPT-3-ENE-1,7-DIOATE HYDRATASE;                     "         
   8:  1HNF-A  3.2  2.9   76   179    8   CD2;                                                       "         
   9:  1I85-A  3.1  3.1   79   110   13   T LYMPHOCYTE ACTIVATION ANTIGEN CD86;                      "         
  10:  2PN5-A  3.0  3.7   82  1283    6   THIOESTER-CONTAINING PROTEIN I;                            "         
  11:  1I8L-A  3.0  3.3   78   199    5   T LYMPHOCYTE ACTIVATION ANTIGEN CD80;                      "         
  12:  1GSM-A  2.9  3.4   74   206   11   MUCOSAL ADDRESSIN CELL ADHESION MOLECULE-1;                "         
  13:  2ICC-A  2.8  2.8   76   119   12   V-SET AND IMMUNOGLOBULIN DOMAIN-CONTAINING                 "         
  14:  1CN4-A  2.8  3.4   85   217    2   PROTEIN (ERYTHROPOIETIN RECEPTOR);                         "         
  15:  2IF7-A  2.6  4.8   79   188    1   SLAM FAMILY MEMBER 6;                                      "         
  16:  2HUH-A  2.5  3.7   86   147    7   PUTATIVE DNA MISMATCH REPAIR PROTEIN;                      "         
  17:  2DRU-A  2.5  3.0   72   180    8   CHIMERA OF CD48 ANTIGEN AND T-CELL SURFACE                 "         
  18:  2CH8-A  2.4  3.1   73   188    8   33 KDA EARLY PROTEIN;                                      "         
  19:  1F97-A  2.3  3.3   72   207   10   JUNCTION ADHESION MOLECULE;                                "         
  20:  1BD9-A  2.2  3.4   82   180    6   PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN;                  "         
-

No 1: 1NKQA  MOLECULE: HYPOTHETICAL 28.8 KDA PROTEIN IN PSD1-SKO1                 

DSSP  LLHHHHHLLLEEEELLLLLLLHHHHLLLLLEEEELHHHEELLLLLLLLLLLLLLLLLLLL
Query SYNYLKAARKIICIGRNYAAHIKELNNQPFFFLKPTSSIVTPLSSSPANSTFNGLNEDGT   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct SYNYLKAARKIICIGRNYAAHIKELNNQPFFFLKPTSSIVTPLSSSPANSTFNGLNEDGT   60
DSSP  LLHHHHHLLLEEEELLLLLLLHHHHHLLLLEEEELHHHEELLLLLLLLLLLLLLLLLLLL


DSSP  LLLLEEELLLLLEEELEEEEEEELLLLLLLLLLLHHHHHHHEEEEEEEELLEEHHHHHHH
Query NPGPIFIPRGVKVHHEIELALIVSKHLSNVTKXKPEEVYDSISGVALALDLTARNVQDEA  120
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct NPGPIFIPRGVKVHHEIELALIVSKHLSNVTKXKPEEVYDSISGVALALDLTARNVQDEA  120
DSSP  LLLLEEELLLLLEEELEEEEEEELLLLLLLLLLLHHHLHHHEEEEEEEELLEEHHHHHHH


DSSP  HHLLLLLHHHHHLLLLEELLLLEEHHHHHHHLLLHHHLEEEEEEELLEEEEEEEHHHLLL
Query KKKGLPWTISKGFDTFXPISAIVSREKFSSYKSNLQDIFRVKCSVNGQLRQDGGTNLXLH  180
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct KKKGLPWTISKGFDTFXPISAIVSREKFSSYKSNLQDIFRVKCSVNGQLRQDGGTNLXLH  180
DSSP  HHHLLLLHHHHHLLLLEELLLLEEHHHHHHHLLLLLLLEEEEEEELLEEEEEEEHHHLLL


DSSP  LHHHHHHHHHLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEEELLEEEEEEEEEEEELL
Query PLHKILQHISTXISLEPGDIILTGTPAGVGELKPGDRVHCELLQNNDNIVDXNFECENRP  240
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct PLHKILQHISTXISLEPGDIILTGTPAGVGELKPGDRVHCELLQNNDNIVDXNFECENRP  240
DSSP  LHHHHHHHHHLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEEELLEEEEEEEEEEEELL


DSSP  LLLLLL.
Query GPYEFR.  246
ident |||||| 
Sbjct GPYEFRe  247
DSSP  LLLLLLl


No 2: 2DFUA  MOLECULE: PROBABLE 2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE               

DSSP  ..LLHH.....................................HHHLLLEEEELLLLLll
Query ..SYNY.....................................LKAARKIICIGRNYAah   21
ident                                                 || | ||||   
Sbjct mkILRFnegrwgvlegelvletdgpggnptgrrydlasvtllpPATPTKIVCVGRNYR..   58
DSSP  leEEEEllleeeeeelleeeeelllllleeeeeeehhhlleelLLLLLLEEEELLLLL..


DSSP  hhhhlLLLLEEEELHHHEELLLLLLlllllllllllllllLLLEEELLLL.LEEELEEEE
Query ikelnNQPFFFLKPTSSIVTPLSSSpanstfnglnedgtnPGPIFIPRGV.KVHHEIELA   80
ident        |  |||       |                     |   |      | | |||
Sbjct ...lpKEPGLFLKGPNALARPGNPR..........dpwgtAEPVPYPFFTeELHYEGELA  105
DSSP  ...llLLLLEEEELHHHEELLLLLL..........lhhhhLLLEEELLLLlLEELLEEEE


DSSP  EEELLLLLLLlLLLHhhHHHHEEEEEEEELLEEHHHHHHHhhllLLLHHHHHLLLLEELL
Query LIVSKHLSNVtKXKPeeVYDSISGVALALDLTARNVQDEAkkkgLPWTISKGFDTFXPIS  140
ident   |      |         |   |   | | ||| ||       | |   |  | | |  
Sbjct VVVGDRMRHV.PPEK..ALDHVLGYTVAVDITARDVQKKD....LQWVRAKSADKFLPLG  158
DSSP  EEELLLLLLL.LHHH..HHHHEEEEEEEELLEEHHHHHHL....LLLHHHHLLLLLEEEE


DSSP  .LLEEHhhhhhhlllHHHLEEEEEEELLEEEEEEEHHHLLLLHHHHHHHHHLLLLLLLLL
Query .AIVSRekfssyksnLQDIFRVKCSVNGQLRQDGGTNLXLHPLHKILQHISTXISLEPGD  199
ident                      |   ||| ||| | |         ||  |||   ||| |
Sbjct pWLETD........lNPQDTWVRTYVNGTLRQEGHTSQMIFSVAEILSYISTFMTLEPLD  210
DSSP  eEEELL........lLLLLLEEEEEELLEEEEEEEHHHLLLLHHHHHHHHHLLLLLLLLL


DSSP  EEELLLLLLLEEELLLLEEEEEEEElleeEEEEEEEEEELLLLLlll
Query IILTGTPAGVGELKPGDRVHCELLQnndnIVDXNFECENRPGPYefr  246
ident   ||||| ||| | ||||                             
Sbjct VVLTGTPEGVGALRPGDRLEVAVEG....VGTLFTLIGPKEERP..w  251
DSSP  EEELLLLLLLLLLLLLLEEEEEELL....LEEEEEEEEEELLLL..l


No 3: 1NR9A  MOLECULE: PROTEIN YCGM;                                              

DSSP  .........LLHHHHHLLLEEEELLLLLllhhhhllLLLEEEELHHHEELLLllllllll
Query .........SYNYLKAARKIICIGRNYAahikelnnQPFFFLKPTSSIVTPLssspanst   51
ident                   |  | | |||         |  | ||                
Sbjct hxyqhhnwqGALLDYPVSKVVCVGSNYA......peEPVLFIKPETALCDLR........   46
DSSP  lllllllllLLLLLLLLLLEEEELLLLL......llLLLEEEELHHHEEELL........


DSSP  lllllllllllLLEEELLL.LLEEELEEEEEEELLLLLLLlLLLHhhHHHHEEEEEEEEL
Query fnglnedgtnpGPIFIPRG.VKVHHEIELALIVSKHLSNVtKXKPeeVYDSISGVALALD  110
ident             |  ||     |||| |||      |          |   | |   |||
Sbjct ...........QPLAIPSDfGSVHHEVELAVLIGATLRQA.TEEH..VRKAIAGYGVALD   92
DSSP  ...........LLLLLLLLlLLEEELEEEEEEELLLLLLL.LHHH..HHHHEEEEEEEEL


DSSP  LEEHHHHHHHHHLLLLLHHHHHLLLLEELLLLEEHHHHHhhllLHHHlEEEEEEELLEEE
Query LTARNVQDEAKKKGLPWTISKGFDTFXPISAIVSREKFSsyksNLQDiFRVKCSVNGQLR  170
ident || | ||   || | ||   | ||   | |       |       |       ||||  |
Sbjct LTLRDVQGKXKKAGQPWEKAKAFDNSCPLSGFIPAAEFT...gDPQN.TTLSLSVNGEQR  148
DSSP  LLLHHHHHHHHHHLLLLHHHHLLLLLEEELLLEEHHHLL...lLHHH.LEEEEEELLEEE


DSSP  EEEEHHHLLLLHHHHHHHHHLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEEelleeEE
Query QDGGTNLXLHPLHKILQHISTXISLEPGDIILTGTPAGVGELKPGDRVHCELLqnndnIV  230
ident | | |  | |         |    |  ||  ||||| ||| |  ||              
Sbjct QQGTTADXIHKIVPLIAYXSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFD.....GH  203
DSSP  EEEEHHHLLLLHHHHHHHHLLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEL.....LE


DSSP  EEEEEEEEllllllll
Query DXNFECENrpgpyefr  246
ident                 
Sbjct SLTTRVLG........  211
DSSP  EEEEELLL........


No 4: 1GTTA  MOLECULE: 4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL            

DSSP  llhhhhhLLLEEEELLLLLL..LHHH..........hllLLLEEEELHHHEELLLlllll
Query synylkaARKIICIGRNYAA..HIKE..........lnnQPFFFLKPTSSIVTPLssspa   48
ident           |     |                          | ||             
Sbjct ......mKGTIFAVALNHRSqlDAWQeafqqspykappkTAVWFIKPRNTVIGCG.....   49
DSSP  ......lLLLEEEEELLLHHhhHHHLlhhhlllllllllLLEEEEELHHHEELLL.....


DSSP  llllllllllllllLLEEELLLLLEEELEEEEEEELLLLLLLLLLlhhHHHHHEEEEEEE
Query nstfnglnedgtnpGPIFIPRGVKVHHEIELALIVSKHLSNVTKXkpeEVYDSISGVALA  108
ident                ||  | | ||      |||| |    |           | | |||
Sbjct ..............EPIPFPQGEKVLSGATVALIVGKTATKVREE...DAAEYIAGYALA   92
DSSP  ..............LLEEELLLLLEELLEEEEEEELLLLLLLLHH...HHHHHEEEEEEE


DSSP  ELLEEHhhHHHHHhllLLLHHHHHLLLLEELLLLEEHHhhhhhlllHHHLEEEEEEELLE
Query LDLTARnvQDEAKkkgLPWTISKGFDTFXPISAIVSREkfssyksnLQDIFRVKCSVNGQ  168
ident  |               |    |  | | ||   |             |        || 
Sbjct NDVSLP..EESFY...RPAIKAKCRDGFCPIGETVALS........NVDNLTIYTEINGR  139
DSSP  ELLLLL..LLLLL...LLLHHHHLLLLLEELLLLLLLL........LLLLLEEEEEELLE


DSSP  EEEEEEHHHLLLLHHHHHHHHHLLLLLLLLLEEELLLLLLLEEELLLLEEEEEEEelleE
Query LRQDGGTNLXLHPLHKILQHISTXISLEPGDIILTGTPAGVGELKPGDRVHCELLqnndN  228
ident       |          |   |    | ||| || |||    |  |||||          
Sbjct PADHWNTADLQRNAAQLLSALSEFATLNPGDAILLGTPQARVEIQPGDRVRVLAE....G  195
DSSP  EEEEEEHHHLLLLHHHHHHHHHLLLLLLLLLEEELLLLLLLLEELLLLEEEEEEL....L


DSSP  EEEEEEEEEELLL...............................................
Query IVDXNFECENRPG...............................................  241
ident                                                             
Sbjct FPPLENPVVDEREvttrksfptlphphgtlfalglnyadhpeeplvflkapntltgdnqt  255
DSSP  LLLEEEEEEEHHHlllllllllllllllleeeelllllllllllleeeelhhheelllee


DSSP  ............................................................
Query ............................................................  241
ident                                                             
Sbjct svrpnnieymhyeaelvvvigkqarnvseadamdyvagytvcndyairdylenyyrpnlr  315
DSSP  eeelllllleelleeeeeeelllllllllllhhhheeeeeeeelleehhhllllllllhh


DSSP  ............................................................
Query ............................................................  241
ident                                                             
Sbjct vksrdgltpmlstivpkeaipdphnltlrtfvngelrqqgttadlifsvpfliaylsefm  375
DSSP  hhllllleellllleehhhllllllleeeeeelleeeeeeehhhllllhhhhhhhhhlll


DSSP  .........................................lllll
Query .........................................pyefr  246
ident                                               
Sbjct tlnpgdmiatgtpkglsdvvpgdevvvevegvgrlvnrivseetak  421
DSSP  lllllleeelllllllllllllleeeeeellleeeeeeeeehhhhl


No 5: 1QCOA  MOLECULE: FUMARYLACETOACETATE HYDROLASE;                             

DSSP  ..................LLHH......................................
Query ..................SYNY......................................    4
ident                                                             
Sbjct msfipvaedsdfpiqnlpYGVFstqsnpkprigvaigdqildlsvikhlftgpalskhqh   60
DSSP  llllllllllllllllllEEEEellllllleeeeeelleeeellllhhhlllllllllhh


DSSP  .........................................................HHH
Query .........................................................LKA    7
ident                                                             
Sbjct vfdettlnnfmglgqaawkearaslqnllsasqarlrddkelrqraftsqasatmhlPAT  120
DSSP  hhhllllhhhhhllhhhhhhhhhhhhhhhlllllhhhhlhhhhhhheeehhhleeelLLL


DSSP  LLLEEEELlLLLL...............lhhhhllLLLEEEELHHHEELLLlllllllll
Query ARKIICIGrNYAA...............hikelnnQPFFFLKPTSSIVTPLssspanstf   52
ident                                     |       ||||            
Sbjct IGDYTDFY.SSRQhatnvgimfrgkenallpnwlhLPVGYHGRASSIVVSG.........  170
DSSP  LLLEEEEL.LLHHhhhhhhhhhllhhhllllllllLLLEEELLLLLEEELL.........


DSSP  llllllllllLLEEELL...............LLLEEELEEEEEEELLLLL..LLLLLLh
Query nglnedgtnpGPIFIPR...............GVKVHHEIELALIVSKHLS..NVTKXKp   95
ident            ||  |                      | | |  |              
Sbjct ..........TPIRRPMgqmrpdnskppvygaCRLLDMELEMAFFVGPGNRfgEPIPIS.  219
DSSP  ..........LLEELLEeeelllllllleeeeLLLEELLEEEEEEELLLLLllLLLLHH.


DSSP  hHHHHHEEEEEEEELLEEHHHHHHHHHlLLLLHHHHHLllLEELL.LLEEHHHHHHHLLL
Query eEVYDSISGVALALDLTARNVQDEAKKkGLPWTISKGFdtFXPIS.AIVSREKFSSYKSN  154
ident       | |  |  |  ||  |       |     | |     ||   |           
Sbjct .KAHEHIFGMVLMNDWSARDIQQWEYV.PLGPFLGKSF..GTTISpWVVPMDALMPFVVP  275
DSSP  .HHHHHEEEEEEEELLEEHHHHHHHLL.LLLLLHHHHL..LEEELlLLEEHHHHHHHEEL


DSSP  .................HHHLEEEEEEEL......LEEEEEEEHHHLLLLHHHHHHHHHL
Query .................LQDIFRVKCSVN......GQLRQDGGTNLXLHPLHKILQHIST  191
ident                           |                           | | | 
Sbjct npkqdpkplpylchsqpYTFDINLSVSLKgegmsqAATICRSNFKHMYWTMLQQLTHHSV  335
DSSP  lllllllllhhhlllllLEELLEEEEEEEllllllLEEEEEEEHHHLLLLHHHHHHHHHL


DSSP  L.LLLLLLLEEELLLL.......LLLE....................EELLLLEEEEEEE
Query X.ISLEPGDIILTGTP.......AGVG....................ELKPGDRVHCELL  223
ident     | |||    ||         |                       |  || |     
Sbjct NgCNLRPGDLLASGTIsgsdpesFGSMlelswkgtkaidvgqgqtrtFLLDGDEVIITGH  395
DSSP  LlLLLLLLLEEELLLLllllhhhLLLHhhhllllllleellllleelLLLLLLEEEEEEE


DSSP  EL...lEEEEEE.EEEEEELLllllll
Query QN...nDNIVDX.NFECENRPgpyefr  246
ident                            
Sbjct CQgdgyRVGFGQcAGKVLPAL......  416
DSSP  EEllllEEELLLeEEEEELLL......


No 6: 1SV6A  MOLECULE: 2-KETO-4-PENTENOATE HYDRATASE;                             

DSSP  ...............................................llhhhhhlLLEEE
Query ...............................................synylkaaRKIIC   13
ident                                                             
Sbjct mtkhtleqlaadlrraaeqgeaiaplrdligidnaeaayaiqhinvqhdvaqgrrVVGRK   60
DSSP  llllhhhhhhhhhhhhhhhlllllllhhhhllllhhhhhhhhhhhhhhhhlllllEEEEE


DSSP  ELLLLLL.lhhhhllLLLEEEELHHHEELLLlllllllllllllllllllLLEEELLLLL
Query IGRNYAA.hikelnnQPFFFLKPTSSIVTPLssspanstfnglnedgtnpGPIFIPRGVK   72
ident  |             || |                                 |   |   
Sbjct VGLTHPKvqqqlgvdQPDFGTLFADMCYGDN...................EIIPFSRVLQ  101
DSSP  EELLLHHhhhlllllLLEEEEEEHHHEEELL...................EEELLLLLLL


DSSP  EEELEEEEEEELLLLLlLLLLLHHHHHHHEEEEEEEELLEEhhHHHH.HHHLLLL...LH
Query VHHEIELALIVSKHLSnVTKXKPEEVYDSISGVALALDLTArnVQDE.AKKKGLP...WT  128
ident    | | ||     |   |     | |  |  |  ||                       
Sbjct PRIEAEIALVLNRDLP.ATDITFDELYNAIEWVLPALEVVG..SRIRdWSIQFVDtvaDN  158
DSSP  LEEEEEEEEEELLLLL.LLLLLHHHHHLLEEEEEEEEEEEL..LLLLlLLLLHHHhhhLH


DSSP  HHHHlllLEELL.LLEEHHHHhhhlllhHHLEEEEEEELLEEEEEEEHHHLL....LLHH
Query ISKGfdtFXPIS.AIVSREKFssyksnlQDIFRVKCSVNGQLRQDGGTNLXL....HPLH  183
ident  | |      |                       |   |      |     |        
Sbjct ASCG...VYVIGgPAQRPAGL......dLKNCAMKMTRNNEEVSSGRGSECLghplNAAV  209
DSSP  HHEE...EEEELlLLLLLLLL......lLLLLEEEEEELLEEEEEEEHHHLLllhhHHHH


DSSP  HHHHHHHLL.LLLLLLLEEELLLLLLLEEELLLLEEEEEEEElleeEEEEEEEEEEllll
Query KILQHISTX.ISLEPGDIILTGTPAGVGELKPGDRVHCELLQnndnIVDXNFECENrpgp  242
ident             |  |||||||          |||           |             
Sbjct WLARKMASLgEPLRTGDIILTGALGPMVAVNAGDRFEAHIEG....IGSVAATFSS....  261
DSSP  HHHHHHHHLlLLLLLLLEEEEEELLLLEELLLLLEEEEEELL....LEEEEEEELL....


DSSP  llll
Query yefr  246
ident     
Sbjct ....  261
DSSP  ....


No 7: 2EB4A  MOLECULE: 2-OXO-HEPT-3-ENE-1,7-DIOATE HYDRATASE;                     

DSSP  ................................................llhhhhhlLLEE
Query ................................................synylkaaRKII   12
ident                                                          |  
Sbjct mfdkhthtliaqrldqaekqreqiraisldypeitiedayavqrewvrlkiaegrtLKGH   60
DSSP  lllhhhhhhhhhhhhhhhhhllllllhhhhlllllhhhhhhhhhhhhhhhhhllllEEEE


DSSP  EELLLLL.lLHHHhllLLLEEEELHHHEELLLlllllllllllllllllllLLEEELLLL
Query CIGRNYA.aHIKElnnQPFFFLKPTSSIVTPLssspanstfnglnedgtnpGPIFIPRGV   71
ident  ||              |                                   |   |  
Sbjct KIGLTSKamQASSqisEPDYGALLDDMFFHDG...................SDIPTDRFI  101
DSSP  EEELHHHhhLLLLlllLLEEEEEEHHHEELLL...................EEELHHHLL


DSSP  LEEELEEEEEEELLLLLLLLLLlHHHHHHHEEEEEEEELLEEhhHHHHhHHLLL.....l
Query KVHHEIELALIVSKHLSNVTKXkPEEVYDSISGVALALDLTArnVQDEaKKKGL.....p  126
ident     | |||    | |          ||     |  || |                    
Sbjct VPRIEVELAFVLAKPLRGPNCT.LFDVYNATDYVIPALELID..ARCH.NIPRKvfdtis  157
DSSP  LLEEEEEEEEEELLLLLLLLLL.HHHHHHHEEEEEEEEEEEL..LLLL.LLLLHhhhhhh


DSSP  LHHHHHlllLEELL.LLEEHHHHhhhlllHHHLEEEEEEELLEEEEEEEHHHLLLLHHHH
Query WTISKGfdtFXPIS.AIVSREKFssyksnLQDIFRVKCSVNGQLRQDGGTNLXLHPLHKI  185
ident                                         ||     |     |      
Sbjct DNAANA...GVILGgRPIKPDEL......DLRWISALMYRNGVIEETGVAAGVLNHPANG  208
DSSP  LHHHEE...EEEELlLLLLLLLL......LHHHLEEEEEELLEEEEEEEHHHLLLLLLHH


DSSP  HHHHHLLL.....LLLLLLEEELLLLLLLEEELLLLEEEEEEEelleEEEEEEEEEEell
Query LQHISTXI.....SLEPGDIILTGTPAGVGELKPGDRVHCELLqnndNIVDXNFECEnrp  240
ident               || | ||| |          ||  |        |            
Sbjct VAWLANKLapydvQLEAGQIILGGSFTRPVPARKGDTFHVDYG....NMGSISCRFV...  261
DSSP  HHHHHHHHhhhllLLLLLLEEELLLLLLLEELLLLLEEEEELH....HHLEEEEEEL...


DSSP  llllll
Query gpyefr  246
ident       
Sbjct ......  261
DSSP  ......


No 8: 1HNFA  MOLECULE: CD2;                                                       

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheellllllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssivtplssspanstfnglnedgt   60
ident                                                             
Sbjct ...........................................................t    1
DSSP  ...........................................................l


DSSP  llLLEEELLLLLeeeleeeeeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query npGPIFIPRGVKvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident          |                                                  
Sbjct naLETWGALGQD................................................   13
DSSP  llEEEEEELLLL................................................


DSSP  hhlllllhhhhhlllLEELL.LLEEHhhhhhhlllhhhLEEEEEEEL..LEEEEEEEHHH
Query kkkglpwtiskgfdtFXPIS.AIVSRekfssyksnlqdIFRVKCSVN..GQLRQDGGTNL  177
ident                                       |   |                 
Sbjct ...............INLDIpSFQMS..........ddIDDIKWEKTsdKKKIAQFRKEK   48
DSSP  ...............EEELLlLLLLL..........llEEEEEEEEHhhLLEEEEELHHH


DSSP  LlllhhhhhhhhhllllllllleeelllLLLLE................eeLLLLEEEEE
Query XlhplhkilqhistxislepgdiiltgtPAGVG................elKPGDRVHCE  221
ident                                                       |     
Sbjct E...........................TFKEKdtyklfkngtlkikhlktDDQDIYKVS   81
DSSP  L...........................EEELLlleeellllleeellllhHHLEEEEEE


DSSP  EEEL.LEEEEEEEEEEEELLLL......................................
Query LLQN.NDNIVDXNFECENRPGP......................................  242
ident        |     |                                              
Sbjct IYDTkGKNVLEKIFDLKIQERVskpkiswtcinttltcevmngtdpelnlyqdgkhlkls  141
DSSP  EEELlLLEEEEEEEEEEEELLLllleeeeelllleeeeellllllleeeeeellleeeee


DSSP  ..................................llll
Query ..................................yefr  246
ident                                       
Sbjct qrvithkwttslsakfkctagnkvskessvepvscpek  179
DSSP  llleeeelllleeeeeeeeeelllleeeeeeeeeelll


No 9: 1I85A  MOLECULE: T LYMPHOCYTE ACTIVATION ANTIGEN CD86;                      

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheellllllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssivtplssspanstfnglnedgt   60
ident                                                             
Sbjct ............................................................    0
DSSP  ............................................................


DSSP  lLLLEEELLLLleeeleeeeeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query nPGPIFIPRGVkvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident     |                                                       
Sbjct .MLKIQAYFNE.................................................   10
DSSP  .LLEEEEELLL.................................................


DSSP  hhlllllhhhhhlllLEEL.LLLEEHHhhhhhlllHHHLEEEEEEELLEEE.EEEEHHHl
Query kkkglpwtiskgfdtFXPI.SAIVSREkfssyksnLQDIFRVKCSVNGQLR.QDGGTNLx  178
ident                         |                |       |          
Sbjct ..............tADLPcQFANSQN.......qSLSELVVFWQDQENLVlNEVYLGK.   48
DSSP  ..............lEEELlLLLLLLL.......lLLLLLEEEEELLLLLEeEEELLLL.


DSSP  lllhhhhhhhhhllllllllleeelLLLLLLE.....................eeLLLLE
Query lhplhkilqhistxislepgdiiltGTPAGVG.....................elKPGDR  217
ident                               |                        |    
Sbjct .........................EKFDSVHskymgrtsfdsdswtlrlhnlqiKDKGL   83
DSSP  .........................LLLLLLLlllllleeelllllleeelllllLLLLE


DSSP  EEEEEEEL....LEEEEEEEEEEEELLllllll
Query VHCELLQN....NDNIVDXNFECENRPgpyefr  246
ident   |            |   | |           
Sbjct YQCIIHHKkptgMIRIHQMNSELSVLA......  110
DSSP  EEEEEELLllllLLEEEEEEEEEEEEL......


No 10: 2PN5A  MOLECULE: THIOESTER-CONTAINING PROTEIN I;                            

DSSP  ........................................llhhhhhllleeeellllll
Query ........................................synylkaarkiicigrnyaa   20
ident                                                             
Sbjct llvvgpkfiranqeytlvisnfnsqlskvdlllklelsvlnvtkmvdvrrnmnrminfnm   60
DSSP  leeeeeleelllleeeeeeeelllllleeeeeeeelllllleeeeeeeelleeeeeeeel


DSSP  lhhhhllllleeeelhhheellllllllllllllllllllllLLEEEllllLEEELEEEE
Query hikelnnqpffflkptssivtplssspanstfnglnedgtnpGPIFIprgvKVHHEIELA   80
ident                                                             
Sbjct pedltagnykitidgqrgfsfhkeaelvylsksisgliqvdkPVFKP....GDTVNFRVI  116
DSSP  lllllllleeeeeeeellllleeeeeeeelllleeeeeeellLEELL....LLEEEEEEE


DSSP  EeelllllllllllhhhhhHHEEEeeeeelleehhhhhhhhhlllllhhhhhlllleell
Query LivskhlsnvtkxkpeevyDSISGvalaldltarnvqdeakkkglpwtiskgfdtfxpis  140
ident                                                             
Sbjct V................ldTELKP....................................  124
DSSP  E................eeLLLLL....................................


DSSP  lleehhhhhhhLLLHHHlEEEEEEEL.LEEEEEEEHhhllllhhhhhhhhhlllllllll
Query aivsrekfssyKSNLQDiFRVKCSVN.GQLRQDGGTnlxlhplhkilqhistxislepgd  199
ident                     |              |                        
Sbjct ...........PARVKS.VYVTIRDPqRNVIRKWST....................akly  152
DSSP  ...........LLLLLE.EEEEEELLlLLEEEEEEE....................eell


DSSP  eeELLLlllLEEEL...lLLEEEEEEEELLEEEEEEEEEEEELL................
Query iiLTGTpagVGELK...pGDRVHCELLQNNDNIVDXNFECENRP................  240
ident                                  |   ||                     
Sbjct agVFES...DLQIAptpmLGVWNISVEVEGEELVSKTFEVKEYVlstfdvqvmpsviple  209
DSSP  llEEEE...EEELLllllLEEEEEEEEELLEEEEEEEEEELLLLllleeeeeeelllllh


DSSP  ...........LLLL.............................................
Query ...........GPYE.............................................  244
ident                                                             
Sbjct ehqavnltieaNYHFgkpvqgvakvelyldddklklkkeltvygkgqvelrfdnfamdad  269
DSSP  hhleeeeeeeeEELLlllleeeeeeeeeelllleeeeeeeeeeleeeeeeelllllllll


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct qqdvpvkvsfveqytnrtvvkqsqitvyryayrvelikespqfrpglpfkcalqfthhdg  329
DSSP  eeeeeeeeeeeellllleeeeeeeeeeelllleeeeeelllllllllleeeeeeeellll


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct tpakgisgkvevsdvrfettttsdndgliklelqpsegteqlsihfnavdgfffyedvnk  389
DSSP  lllllleeeeeehhhleeeeeellllleeeeeellllllleeeeeeellllleeeeeeel


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct vetvtdayiklelkspikrnklmrfmvtctermtffvyyvmskgniidagfmrpnkqpky  449
DSSP  lllllllleeeeelllllllleeeeeeeeeeeelleeeeeelllleeeeeeelllleeee


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct llqlnatekmiprakiliatvagrtvvydfadlafqelrnnfdlsideqeikpgrqiels  509
DSSP  eeeeellhhhlleeeeeeeeeelleeeeeeeeeelhhhlllleeeellllllllleeeee


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct msgrpgayvglaaydkalllfnknhdlfwedigqvfdgfhenefdifhslglfartlddi  569
DSSP  eellllleeeeeeeehhhhhhllllllhhhhhhhhhlllllllllhhhhhleeeeellll


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct lfdsqeswlwknvsigrsgsrklievvpdtttswyltgfsidpvyglgiikkpiqfttvq  629
DSSP  eellllllllleeellllleeeeeeellllleeeeeeeeeeellleeeelllleeeeell


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct pfyivenlpysikrgeavvlqftlfnnlgaeyiadvtlynvanqtefvgrpntdlsytks  689
DSSP  leeeeeellleeellleeeeeeeeeellllleeeeeeeelhhhleeelllllllleeeee


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct vsvppkvgvpisflikarklgemavrvkasimlghetdalekvirvmpeslvqprmdtrf  749
DSSP  eeellllleeeeeeeeellleeeeeeeeeelllllleeeeeeeeeeellllllleeeeee


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct fcfddhknqtfpinldinkkadsgstkiefrlnpnllttviknldhllgvptgcgeqnmv  809
DSSP  eeeeeeeeeeeeeelllllllllllleeeeeeellllhhhhhllllllllllllllhhhh


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct kfvpnilvldylhaigskeqhlidkatnllrqgyqnqmryrqtdgsfglwettngsvflt  869
DSSP  hlhhhhhhhhhhhhlllllhhhhhhhhhhhhhhhhhhhhhllllllllllllllllhhhh


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct afvgtsmqtavkyisdidaamvekaldwlaskqhfsgrfdkagaeyhkemqgglrngval  929
DSSP  hhhhhhhhhhllllllllhhhhhhhhhhhhhllllllllllllllllhhhhllllllhhh


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct tsyvlmallendiakakhaeviqkgmtylsnqfgsinnaydlsiatyammlnghtmkeea  989
DSSP  hhhhhhhhhllhhhhhhlhhhhhhhhhhhhhhhhhlllhhhhhhhhhhhhhhllllhhhh


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct lnklidmsfidadknerfwnttnpiettayallsfvmaekytdgipvmnwlvnqryvtgs 1049
DSSP  hhhhhhlleeelllleeelllllhhhhhhhhhhhhhhlllhhhhhhhhhhhhllllllll


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct fpstqdtfvglkaltkmaekispsrndytvqlkykksakyfkinseqidvenfvdipedt 1109
DSSP  lllhhhhhhhhhhhhhhhhhhllllleeeeeeeelleeeeeeelllllllllleelllll


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct kkleinvggigfgllevvyqfnlnlvnfenrfqldlekqntgsdyelrlkvcasyipqlt 1169
DSSP  leeeeeeeeeeeeeeeeeeellllllleeeleeeeeeeelllllleeeeeeeeeelllll


DSSP  ............................................................
Query ............................................................  244
ident                                                             
Sbjct drrsnmalievtlpsgyvvdrnpiseqtkvnpiqkteiryggtsvvlyydnmgserncft 1229
DSSP  lllllleeeeeelllleeeeeeeeellllllllleeeeelllleeeeeellllllleeee


DSSP  ....................................................ll
Query ....................................................fr  246
ident                                                       
Sbjct ltayrrfkvalkrpayvvvydyyntnlnaikvyevdkqnlceicdeedcpaecg 1283
DSSP  eeeeellleelllleeeeeeelleeeeeeeeeellllllhhhhlllllllllll


No 11: 1I8LA  MOLECULE: T LYMPHOCYTE ACTIVATION ANTIGEN CD80;                      

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheellllllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssivtplssspanstfnglnedgt   60
ident                                                             
Sbjct ............................................................    0
DSSP  ............................................................


DSSP  llLLEEELLLLLeeeleeeeeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query npGPIFIPRGVKvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident                                                             
Sbjct .vIHVTKEVKEV................................................   11
DSSP  .lEEEEEELLLL................................................


DSSP  hhlllllhhhhhlllLEEL.LLLEehhhhhhhllLHHHLEEEEEEELLEEEEEEEHHHll
Query kkkglpwtiskgfdtFXPI.SAIVsrekfssyksNLQDIFRVKCSVNGQLRQDGGTNLxl  179
ident                        |                |                   
Sbjct ...............ATLScGHNV........svEELAQTRIYWQKEKKMVLTMMSGD..   46
DSSP  ...............EEELlLLLL........lhHHHLLEEEEEEELLEEEEEEELLE..


DSSP  llhhhhhhhhhllllllllleeellLLLLLE....................eeLLLLEEE
Query hplhkilqhistxislepgdiiltgTPAGVG....................elKPGDRVH  219
ident                                                             
Sbjct .........................MNIWPEyknrtifditnnlsivilalrpSDEGTYE   81
DSSP  .........................EEELLLlllleeeellllleeeellllhHHLEEEE


DSSP  EEEEEL....LEEEEEEEEEEEELLLL.................................
Query CELLQN....NDNIVDXNFECENRPGP.................................  242
ident |  |                                                        
Sbjct CVVLKYekdaFKREHLAEVTLSVKADFptpsisdfeiptsnirriicstsggfpephlsw  141
DSSP  EEEEEEelleEEEEEEEEEEEEEELLLllleeeeeellllleeeeeeeeeeellleeeee


DSSP  ......................................................llll
Query ......................................................yefr  246
ident                                                           
Sbjct lengeelnainttvsqdpetelyavsskldfnmttnhsfmclikyghlrvnqtfnwnt  199
DSSP  elllllllllleeeeelllllleeeeeeeeeellllleeeeeeeelleeelleeelll


No 12: 1GSMA  MOLECULE: MUCOSAL ADDRESSIN CELL ADHESION MOLECULE-1;                

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheELLLlllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssiVTPLssspanstfnglnedgt   60
ident                                                             
Sbjct ................................vkplqvePPEP.................   11
DSSP  ................................llleeeeLLLL.................


DSSP  lllLEEELLLLLEEELEEEEeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query npgPIFIPRGVKVHHEIELAlivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident          |        ||                                        
Sbjct ...VVAVALGASRQLTCRLA........................................   28
DSSP  ...EEEEELLLLEEEEEEEL........................................


DSSP  hhlllllhhhhhlllleelllleehhhhhhhlllHHHLEEEEEEELL..EEEEEEEHhhl
Query kkkglpwtiskgfdtfxpisaivsrekfssyksnLQDIFRVKCSVNG..QLRQDGGTnlx  178
ident                                         |               |   
Sbjct .................................cADRGASVQWRGLDtsLGAVQSDT...   52
DSSP  .................................lLLLLLEEEEELLLllLLLEEEEL...


DSSP  lllhhhhhhhhhllllllllleeellllllLEEE.....lLLLEEEEEEEELLEEeEEEE
Query lhplhkilqhistxislepgdiiltgtpagVGEL.....kPGDRVHCELLQNNDNiVDXN  233
ident                               |               |             
Sbjct ...........................grsVLTVrnaslsAAGTRVCVGSCGGRT.FQHT   84
DSSP  ...........................leeEEEEllllhhHLEEEEEEEEELLEE.EEEE


DSSP  EEEEELLLL...................................................
Query FECENRPGP...................................................  242
ident         |                                                   
Sbjct VQLLVYAFPnqltvspaalvpgdpevactahkvtpvdpnalsfsllvggqelegaqalgp  144
DSSP  EEEEEELLLleeeeellllllllleeeeeeeeellllllleeeeeeelleelllleelll


DSSP  ..........................................................ll
Query ..........................................................ye  244
ident                                                             
Sbjct evqeeeeepqgdedvlfrvterwrlpplgtpvppalycqatmrlpglelshrqaipvlie  204
DSSP  eeeelllllllllllleeeeeeeelllllllllleeeeeeeeeelleeeeeeeeeellll


DSSP  ll
Query fr  246
ident   
Sbjct gr  206
DSSP  ll


No 13: 2ICCA  MOLECULE: V-SET AND IMMUNOGLOBULIN DOMAIN-CONTAINING                 

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheeLLLLllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssivTPLSsspanstfnglnedgt   60
ident                                                             
Sbjct ...................................grpilEVPE................    9
DSSP  ...................................lllllLLLL................


DSSP  lllLEEELLLLLeeeleeeeeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query npgPIFIPRGVKvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident        |                                                    
Sbjct ...SVTGPWKGD................................................   18
DSSP  ...EEEEELLLL................................................


DSSP  hhlllllhhhhhlllLEELLLLEEHHHhhhhlllhhhlEEEEEEEL....LEEEEEEeHH
Query kkkglpwtiskgfdtFXPISAIVSREKfssyksnlqdiFRVKCSVN....GQLRQDGgTN  176
ident                  |                      ||  |               
Sbjct ..............vNLPCTYDPLQGY.........tqVLVKWLVQrgsdPVTIFLR.DS   54
DSSP  ..............eEELLLLLLLLLL.........eeEEEEEEELllllLEEEEEE.EL


DSSP  HLlllhhhhhhhhhllllllllleeelllLLLLE........................ee
Query LXlhplhkilqhistxislepgdiiltgtPAGVG........................el  212
ident                                                             
Sbjct SG...........................DHIQQakyqgrlhvshkvpgdvslqlstlem   87
DSSP  LE...........................EEELLhhhllleeellllllllleeellllh


DSSP  LLLLEEEEEEEEL....lEEEEEEEEEEEELLllllll
Query KPGDRVHCELLQN....nDNIVDXNFECENRPgpyefr  246
ident        ||             |   |           
Sbjct DDRSHYTCEVTWQtpdgnQVVRDKITELRVQK......  119
DSSP  HHLEEEEEEEEEElllllEEEEEEEEEEEEEL......


No 14: 1CN4A  MOLECULE: PROTEIN (ERYTHROPOIETIN RECEPTOR);                         

DSSP  llhhhhhllleeeelllllllhhhhlllLLEE...EELHhheelllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqPFFF...LKPTssivtplssspanstfnglne   57
ident                             |                               
Sbjct ............................PDPKfesKAAL.....................   11
DSSP  ............................LLHHhhhHHHH.....................


DSSP  llllllleeellllleeeleeeeeeelllllllllllhhhhhhheeeEEEEELLEEHhhh
Query dgtnpgpifiprgvkvhheielalivskhlsnvtkxkpeevydsisgVALALDLTARnvq  117
ident                                                  |          
Sbjct .........................................laargpEELLCFTERL...   27
DSSP  .........................................hhllllLLLEEELLLL...


DSSP  hhhhhlllllhhhhhlllleelllleehhhhhhhLLLHH.HLEEEEEEEL.LEEEEEEEh
Query deakkkglpwtiskgfdtfxpisaivsrekfssyKSNLQ.DIFRVKCSVN.GQLRQDGGt  175
ident                                                             
Sbjct .......................edlvcfweeaaSAGVGpGQYSFSYQLEdEPWKLCRL.   63
DSSP  .......................llleeeeeellLLLLLlLLEEEEEEELlLLLEEELL.


DSSP  hHLLLlhhhHHHHhhllllllllleeeLLLLLLL..EEELlLLEEEEEEEEL.LEEEEEE
Query nLXLHplhkILQHistxislepgdiilTGTPAGV..GELKpGDRVHCELLQN.NDNIVDX  232
ident                                                             
Sbjct .HQAP....TARG............avRFWCSLPtaDTSS.FVPLELRVTAAsGAPRYHR  105
DSSP  .EEEE....LLLL............leEEEEELLhhHLLL.LLLEEEEEEELlLLLLLEE


DSSP  EEE.........................................................
Query NFE.........................................................  235
ident                                                             
Sbjct VIHinevvlldapvglvarladesghvvlrwlpppetpmtshiryevdvsagqgagsvqr  165
DSSP  EELlllleelllleeeelllllllllleeeeelllllllhhheeeeeeeellllllleee


DSSP  ..........................eeELLL...............lllll
Query ..........................ceNRPG...............pyefr  246
ident                                                     
Sbjct veilegrtecvlsnlrgrtrytfavrarMAEPsfggfwsewsepvslltpsd  217
DSSP  eeellllleeelllllllleeeeeeeeeELLLllleellllllleeeellll


No 15: 2IF7A  MOLECULE: SLAM FAMILY MEMBER 6;                                      

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheellllllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssivtplssspanstfnglnedgt   60
ident                                                             
Sbjct ...........................................................l    1
DSSP  ...........................................................l


DSSP  llLLEEELlllleeeleeeeeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query npGPIFIPrgvkvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident                                                             
Sbjct tpLMVNGI....................................................    9
DSSP  llEEEEEE....................................................


DSSP  hhlllllhhhhhlLLLEEL.LLLEEhhhhhhhlllhhhlEEEEEEELLEEEEEEEHhhLL
Query kkkglpwtiskgfDTFXPI.SAIVSrekfssyksnlqdiFRVKCSVNGQLRQDGGTnlXL  179
ident                                               |             
Sbjct ...........lgESVTLPlEFPAG...........ekvNFITWLFNETSLAFIVP..HE   45
DSSP  ...........llLLEEELlLLLLL...........lllLEEEEEELLEEEEEEEL..LL


DSSP  LLhhhhhhhhhllllllllleeeLLLLLLLE....................eeLLLLEEE
Query HPlhkilqhistxislepgdiilTGTPAGVG....................elKPGDRVH  219
ident                                                             
Sbjct TK.....................SPEIHVTNpkqgkrlnftqsyslqlsnlkmEDTGSYR   84
DSSP  LL.....................LLEEEELLhhhhlleeellllleeellllhHHLEEEE


DSSP  EEEEELLEEeEEEEEEEEELLLL.......................LLLL..........
Query CELLQNNDNiVDXNFECENRPGP.......................YEFR..........  246
ident                                                             
Sbjct AQISTKTSA.KLSSYTLRILRQLrniqvtnhsqnmtcelhltcsveDADDnvsfrwealg  143
DSSP  EEEELLLLE.EEEEEEEEEELLLeeeeeeelllllleeeeeeeeeeLLLLlleeeeeell


DSSP  .............................................
Query .............................................  246
ident                                              
Sbjct ntlssqpnltvswdprisseqdytciaenavsnlsfsvsaqklce  188
DSSP  eeeellleeeeeelllllllleeeeeeeelleeeeeeeehhhhll


No 16: 2HUHA  MOLECULE: PUTATIVE DNA MISMATCH REPAIR PROTEIN;                      

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheellllllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssivtplssspanstfnglnedgt   60
ident                                                             
Sbjct ............................................................    0
DSSP  ............................................................


DSSP  lLLLEEElllllEEELEEEEEEEL.LLLLllllllhhhhhhheEEEEEEELL.eehhhhh
Query nPGPIFIprgvkVHHEIELALIVS.KHLSnvtkxkpeevydsiSGVALALDL.tarnvqd  118
ident    |              ||                           |  |         
Sbjct .RQPEVR...ggDTLNVFLAYVPEdAKAX..........xttpFEAYLVNDSnyylyyty   46
DSSP  .LLLLLL...llLLLLEEEEEEELlLLLL..........llllEEEEEEELLlleeeeee


DSSP  hhhhlllllhhhhhlllLEELLLLEEHhhhHHHLLLHHHlEEEEEEEL.......LEEEE
Query eakkkglpwtiskgfdtFXPISAIVSRekfSSYKSNLQDiFRVKCSVN.......GQLRQ  171
ident                                           |                 
Sbjct lsaegkawnnrshglvePNTKLLLEEF..tKDVLNEXER.VAVQLIAFkdgkpaaIKPAV  103
DSSP  eeeelleeeeeeeeeelLLEEEEEEEE..lHHHHHHLLL.EEEEEEEElllllllLLLLE


DSSP  EEEHHhllllHHHHHHHHH..lllllllLLEEELLLLllleeelllleeeeeeeelleee
Query DGGTNlxlhpLHKILQHIS..txislepGDIILTGTPagvgelkpgdrvhcellqnndni  229
ident                                                             
Sbjct SVELR....iDTVKFYKLHtfsasdffeEPALIYDIV.......................  136
DSSP  EEEEL....lLHHHHHLHHhleeelleeEEEEEEEEE.......................


DSSP  eeeeeeeeellllllll
Query vdxnfecenrpgpyefr  246
ident                  
Sbjct ......kddvpakqvyv  147
DSSP  ......elleellllll


No 17: 2DRUA  MOLECULE: CHIMERA OF CD48 ANTIGEN AND T-CELL SURFACE                 

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheellllllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssivtplssspanstfnglnedgt   60
ident                                                             
Sbjct ........................................................fqdq    4
DSSP  ........................................................llll


DSSP  llLLEEELLLLLeeeleeeeeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query npGPIFIPRGVKvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident          |                                                  
Sbjct svPNVNAITGSN................................................   16
DSSP  llLEEEEELLLL................................................


DSSP  hhlllllhhhhhlllLEEL.LLLEehhhhhhhlllhhhLEEEEEEEL.LEEEEEEEHHHL
Query kkkglpwtiskgfdtFXPI.SAIVsrekfssyksnlqdIFRVKCSVN.GQLRQDGGTNLX  178
ident                                         |        |       |  
Sbjct ...............VTLTiLKHP...........lasYQRLTWLHTtNQKILEYFPNGK   50
DSSP  ...............EEELlLLLL...........lllLLEEEEELLlLLEEEEELLLLL


DSSP  lllhhhhhhhhhllllllllleeelllLLLLE.....................eeLLLLE
Query lhplhkilqhistxislepgdiiltgtPAGVG.....................elKPGDR  217
ident                                                             
Sbjct ...........................KTVFEsvfkdrvdldktngalriynvskEDRGD   83
DSSP  ...........................EEELLlllllleeelllllleeellllhHHLEE


DSSP  EEEEEEeLLEEeEEEEEEEEELLLL...................................
Query VHCELLqNNDNiVDXNFECENRPGP...................................  242
ident      |             |                                        
Sbjct YYMRML.HETE.DQWKITMEVYEMVskpmiywecsnatltcevlegtdvelklyqgkehl  141
DSSP  EEEEEE.LLLE.EEEEEEEEEELLLllleeeeehhhleeeeellllllleeeeeelleee


DSSP  ...................................llll
Query ...................................yefr  246
ident                                        
Sbjct rslrqktmsyqwtnlrapfkckavnrvsqesemevvncp  180
DSSP  eeellleeeeellllllleeeeeeelleeeeeeelllll


No 18: 2CH8A  MOLECULE: 33 KDA EARLY PROTEIN;                                      

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheellllllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssivtplssspanstfnglnedgt   60
ident                                                             
Sbjct ............................................................    0
DSSP  ............................................................


DSSP  llllEEELLLLLEeeleeeeeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query npgpIFIPRGVKVhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident          |  |                                               
Sbjct ....VTAFLGERV...............................................    9
DSSP  ....LEEELLLLE...............................................


DSSP  hhlllllhhhhhlllLEELLLLEEHhhhhhhlllhhHLEEEEEEEL.....LEEEEEEEH
Query kkkglpwtiskgfdtFXPISAIVSRekfssyksnlqDIFRVKCSVN.....GQLRQDGGT  175
ident                                         |            |      
Sbjct ...............TLTSYWRRVS.........lgPEIEVSWFKLgpgeeQVLIGRMHH   45
DSSP  ...............EEEEELLLLL.........lhHHLEEEEEEElllllEEEEEEEEL


DSSP  HHllllhhhhhhhhhllllllllleeelllLLLL......................eeeL
Query NLxlhplhkilqhistxislepgdiiltgtPAGV......................gelK  213
ident                                                             
Sbjct DV............................IFIEwpfrgffdihrsantfflvvtaaniS   77
DSSP  LE............................EEELhhhllleeeeeelleeeeeellllhH


DSSP  LLLEEEEEEEELLEEeEEEEEEEEELLLL...............................
Query PGDRVHCELLQNNDNiVDXNFECENRPGP...............................  242
ident       |         |                                           
Sbjct HDGNYLCRMKLGETE.VTKQEHLSVVKPLtlsvhsersqfpdfsvltvtctvnafphphv  136
DSSP  HLEEEEEEEEELLEE.EEEEEEEEEEEEEeeeeeeeelllllllleeeeeeeeeelleee


DSSP  ................................................llll
Query ................................................yefr  246
ident                                                     
Sbjct qwlmpggvmkekdgslsvavdlslpkpwhlpvtcvgkndkeeahgvyvsgyl  188
DSSP  eeellllleellllleeeeeeeeellllllleeeeeeelleeeeeeeeelll


No 19: 1F97A  MOLECULE: JUNCTION ADHESION MOLECULE;                                

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhhheellllllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptssivtplssspanstfnglnedgt   60
ident                                                             
Sbjct ......................................................kgsvyt    6
DSSP  ......................................................lleeel


DSSP  LLLLEEELLLLLeeeleeeeeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query NPGPIFIPRGVKvhheielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident        |                                                    
Sbjct AQSDVQVPENES................................................   18
DSSP  LLLEEEEELLLL................................................


DSSP  hhlllllhhhhhlllLEELLLLEEhhhhhhhlllhhHLEEEEEEEL....LEEEEEEehh
Query kkkglpwtiskgfdtFXPISAIVSrekfssyksnlqDIFRVKCSVN....GQLRQDGgtn  176
ident                                        ||           |       
Sbjct ...............IKLTCTYSG...........fSSPRVEWKFVqgstTALVCYN...   49
DSSP  ...............EEEELEEEL...........lLLEEEEEEEEelleEEEEEEL...


DSSP  hllllhhhhhhhhhllllllllleeelllLLLLE.................eeLLLLEEE
Query lxlhplhkilqhistxislepgdiiltgtPAGVG.................elKPGDRVH  219
ident                                                      |      
Sbjct ............................sQITAPyadrvtfsssgitfssvtrKDNGEYT   81
DSSP  ............................lEELHHhllleeeelleeeellllhHHLEEEE


DSSP  EEEEELLE.eEEEEEEEEEELLLL....................................
Query CELLQNND.nIVDXNFECENRPGP....................................  242
ident |                      |                                    
Sbjct CMVSEEGGqnYGEVSIHLTVLVPPskptisvpssvtignravltcsehdgsppseyswfk  141
DSSP  EEEEELLLllEEEEEEEEEEELLLllleeellleeelllleeeeeelllllllleeeeee


DSSP  ............................................................
Query ............................................................  242
ident                                                             
Sbjct dgismlttrafmnssftidpksgdlifdpvtafdsgeyycqaqngygtamrseaahmdav  201
DSSP  lleellllllllllleeelllllleeellllhhhleeeeeeeelllllleellleeeeee


DSSP  ..llll
Query ..yefr  246
ident       
Sbjct elnvgg  207
DSSP  llllll


No 20: 1BD9A  MOLECULE: PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN;                  

DSSP  llhhhhhllleeeelllllllhhhhllllleeeelhHHEELLLlllllllllllllllll
Query synylkaarkiicigrnyaahikelnnqpffflkptSSIVTPLssspanstfnglnedgt   60
ident                                                             
Sbjct ...........lskwsgplslqevdeqpqhplhvtyAGAAVDE.................   32
DSSP  ...........lhhhhllllhhhlllllleeleeeeLLEEELL.................


DSSP  llLLEEELllllEEELeeeeeeelllllllllllhhhhhhheeeeeeeelleehhhhhhh
Query npGPIFIPrgvkVHHEielalivskhlsnvtkxkpeevydsisgvalaldltarnvqdea  120
ident                                                             
Sbjct lgKVLTPT..qvKNRP............................................   46
DSSP  llEELLLH..hhLLLL............................................


DSSP  hhlllllhhhhhlllleelLLLEEhhhhhhhlllHHHLEEEEEEEL...........LEE
Query kkkglpwtiskgfdtfxpiSAIVSrekfssyksnLQDIFRVKCSVN...........GQL  169
ident                                                             
Sbjct .................tsISWDG........ldSGKLYTLVLTDPdapsrkdpkyrEWH   81
DSSP  .................leEELLL........llLLLEEEEEEEELlllllllllllLEE


DSSP  EEEEEHhhllllhhhhhhhhhllllllllleeELLLL.LLLEEELL.....LLEEEEEEE
Query RQDGGTnlxlhplhkilqhistxislepgdiiLTGTP.AGVGELKP.....GDRVHCELL  223
ident                                   ||         |       |      
Sbjct HFLVVN....................mkgndiSSGTVlSDYVGSGPpkgtgLHRYVWLVY  121
DSSP  EEEEEE....................eelllhHHLEEeELLLLLLLlllllLEEEEEEEE


DSSP  EL.................................LEEEEEEEEEEEELL...llllll
Query QN.................................NDNIVDXNFECENRP...gpyefr  246
ident                                               |            
Sbjct EQdrplkcdepilsnrsgdhrgkfkvasfrkkyelRAPVAGTCYQAEWDDyvpklyeql  180
DSSP  ELlllllllllllllllllllllllhhhhhhhlllLLLLEEEEEEELLLLlhhhhhhhl