DaliLite: Structural Neighbours
Query: 1LNZA
MOLECULE: SPO0B-ASSOCIATED GTP-BINDING PROTEIN;
The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.Summary
Notation:
- Chain: PDB entry code plus chain identifier
- Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
- rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
- lali: number of structurally equivalent residues
- nres: number of amino acids in the protein
- %id: percentage of identical amino acids over all structurally equivalent residues
- Description: the COMPND record from the PDB entry
No: Chain Z rmsd lali nres %id Description
1: 1UDX-A 13.6 3.9 191 412 42 THE GTP-BINDING PROTEIN OBG; "
2: 2E87-A 13.1 13.3 208 356 20 HYPOTHETICAL PROTEIN PH1320; "
3: 1Z22-A 12.2 3.4 143 164 15 RAS-RELATED PROTEIN RAB-23; "
4: 1XTQ-A 12.0 2.9 143 169 15 GTP-BINDING PROTEIN RHEB; "
5: 1T91-A 12.0 3.0 142 176 14 RAS-RELATED PROTEIN RAB-7; "
6: 2G3Y-A 11.7 3.6 149 169 18 GTP-BINDING PROTEIN GEM; "
7: 2BOV-A 11.6 3.2 145 173 16 RAS-RELATED PROTEIN RAL-A; "
8: 1WXQ-A 11.6 2.4 138 344 28 GTP-BINDING PROTEIN; "
9: 1MKY-A 11.6 6.2 146 407 24 PROBABLE GTP-BINDING PROTEIN ENGA; "
10: 2OHF-A 11.5 2.9 141 327 28 GTP-BINDING PROTEIN 9; "
11: 2HXS-A 11.5 3.2 148 178 11 RAS-RELATED PROTEIN RAB-28; "
12: 2D74-A 11.5 4.4 157 403 16 TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT; "
13: 2J1L-A 11.3 2.8 131 157 21 RHO-RELATED GTP-BINDING PROTEIN RHOD; "
14: 2BCG-Y 11.3 4.1 149 194 19 SECRETORY PATHWAY GDP DISSOCIATION INHIBITOR; "
15: 1ZCB-A 11.1 3.5 143 318 15 G ALPHA I/13; "
16: 1YZT-A 11.1 3.2 133 155 20 RAS-RELATED PROTEIN RAB-21; "
17: 1A2K-C 11.1 2.8 139 196 17 NUCLEAR TRANSPORT FACTOR 2; "
18: 2Q3F-A 10.9 3.6 135 179 16 RAS-RELATED GTP-BINDING PROTEIN D; "
19: 1WF3-A 10.9 3.2 138 296 25 GTP-BINDING PROTEIN; "
20: 1WB1-A 10.8 3.8 148 450 22 TRANSLATION ELONGATION FACTOR SELB; "
21: 2P5S-A 10.7 2.7 125 157 14 RAS AND EF-HAND DOMAIN CONTAINING; "
22: 2FH5-B 10.7 3.1 135 188 19 SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA "
23: 1XB2-A 10.7 3.2 140 369 17 ELONGATION FACTOR TU, MITOCHONDRIAL; "
24: 2H18-A 10.6 3.2 137 174 17 ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8A; "
25: 2J0V-A 10.4 2.9 138 178 14 RAC-LIKE GTP-BINDING PROTEIN ARAC7; "
26: 2CXX-A 10.4 4.0 138 184 22 PROBABLE GTP-BINDING PROTEIN ENGB; "
27: 1GOT-A 10.4 6.0 163 338 13 GT-ALPHA/GI-ALPHA CHIMERA; "
28: 2BMJ-A 10.3 3.3 142 174 11 CENTAURIN GAMMA 1; "
29: 2B7B-A 10.1 4.1 158 440 16 ELONGATION FACTOR 1-ALPHA; "
30: 1EGA-A 10.1 3.2 131 292 21 PROTEIN (GTP-BINDING PROTEIN ERA); "
31: 1AZS-C 10.1 3.3 147 339 16 VC1; "
32: 2GF0-A 10.0 3.8 141 173 16 GTP-BINDING PROTEIN DI-RAS1; "
33: 1SUL-A 9.5 3.5 139 186 18 GTP-BINDING PROTEIN YSXC; "
34: 1R5B-A 9.5 5.9 159 409 14 EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP- "
35: 1H65-A 9.5 3.5 150 257 15 CHLOROPLAST OUTER ENVELOPE PROTEIN OEP34; "
36: 2GJ8-A 9.4 3.1 124 161 19 TRNA MODIFICATION GTPASE TRME; "
37: 1NRJ-B 9.3 3.5 136 191 15 SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA "
38: 2BEJ-A 9.1 3.2 135 245 16 SEGREGATION PROTEIN; "
39: 1EG7-A 9.0 3.8 155 549 12 FORMYLTETRAHYDROFOLATE SYNTHETASE; "
40: 2HJG-A 8.5 10.0 151 400 19 GTP-BINDING PROTEIN ENGA; "
41: 1TPZ-A 8.5 4.9 139 395 13 INTERFERON-INDUCIBLE GTPASE; "
42: 1ZUN-B 8.3 4.0 140 394 14 SULFATE ADENYLYLTRANSFERASE SUBUNIT 2; "
43: 1G7R-A 8.1 4.8 136 559 16 TRANSLATION INITIATION FACTOR IF2/EIF5B; "
44: 2H5E-A 7.8 3.2 147 488 16 PEPTIDE CHAIN RELEASE FACTOR RF-3; "
45: 2BM0-A 7.7 3.6 153 666 19 ELONGATION FACTOR G; "
46: 1XZP-A 7.4 18.2 180 456 18 PROBABLE TRNA MODIFICATION GTPASE TRME; "
47: 2PKX-A 7.1 3.5 105 119 11 TRANSCRIPTIONAL REGULATORY PROTEIN PHOP; "
48: 1VCM-A 7.1 3.7 130 531 17 CTP SYNTHETASE; "
49: 2QMO-A 7.0 3.9 126 220 10 DETHIOBIOTIN SYNTHETASE; "
50: 2OXR-A 7.0 3.6 139 246 19 ATP(GTP)BINDING PROTEIN; "
51: 2HF8-A 7.0 3.0 115 211 17 PROBABLE HYDROGENASE NICKEL INCORPORATION "
52: 2E1R-A 7.0 3.7 161 828 16 ELONGATION FACTOR 2; "
53: 1XHE-A 7.0 3.2 103 121 17 AEROBIC RESPIRATION CONTROL PROTEIN ARCA; "
54: 1M5T-A 6.9 3.3 100 123 13 CELL DIVISION RESPONSE REGULATOR DIVK; "
55: 1HYQ-A 6.9 3.3 123 232 15 CELL DIVISION INHIBITOR (MIND-1); "
56: 1WDT-A 6.8 4.4 145 660 19 ELONGATION FACTOR G HOMOLOG; "
57: 2QAG-A 6.6 5.1 148 232 14 SEPTIN-2; "
58: 2APJ-A 6.6 3.7 141 244 12 PUTATIVE ESTERASE; "
59: 2QR3-A 6.5 3.3 103 121 10 TWO-COMPONENT SYSTEM RESPONSE REGULATOR; "
60: 1SRQ-A 6.5 8.3 151 330 11 GTPASE-ACTIVATING PROTEIN 1; "
61: 1JWY-B 6.5 3.7 138 281 19 MYOSIN II HEAVY CHAIN; "
62: 1A82-A 6.5 3.8 122 224 15 DETHIOBIOTIN SYNTHETASE; "
63: 2J68-A 6.4 4.8 160 680 16 BACTERIAL DYNAMIN-LIKE PROTEIN; "
64: 1XJC-A 6.4 3.3 99 145 16 MOBB PROTEIN HOMOLOG; "
65: 2AFH-E 6.2 4.0 125 289 14 NITROGENASE MOLYBDENUM-IRON PROTEIN; "
66: 2GKG-A 6.1 3.6 99 122 13 RESPONSE REGULATOR HOMOLOG; "
67: 1KGS-A 6.1 6.3 101 219 16 DNA BINDING RESPONSE REGULATOR D; "
68: 2QAG-B 6.0 7.1 141 246 16 SEPTIN-2; "
69: 1OXB-B 6.0 3.6 105 124 9 YPD1P; "
70: 1ION-A 6.0 3.6 120 243 15 PROBABLE CELL DIVISION INHIBITOR MIND; "
71: 1ZU4-A 5.9 3.4 127 305 17 FTSY; "
72: 1DCF-A 5.9 3.5 108 133 12 ETR1 PROTEIN; "
73: 2OYS-A 5.8 5.1 124 230 12 HYPOTHETICAL PROTEIN SP1951; "
74: 2Q9A-A 5.6 2.9 112 304 17 CELL DIVISION PROTEIN FTSY; "
75: 2P67-A 5.6 3.9 122 302 17 LAO/AO TRANSPORT SYSTEM KINASE; "
76: 2GWR-A 5.6 5.1 105 225 13 DNA-BINDING RESPONSE REGULATOR MTRA; "
77: 1E6K-A 5.6 4.0 110 130 9 CHEMOTAXIS PROTEIN CHEY; "
78: 2NO0-A 5.4 3.5 113 242 15 DEOXYCYTIDINE KINASE; "
79: 1XRS-B 5.4 7.6 123 212 6 D-LYSINE 5,6-AMINOMUTASE ALPHA SUBUNIT; "
80: 1T0I-A 5.4 3.8 110 185 10 YLR011WP; "
81: 1FSP-A 5.4 3.4 100 124 15 STAGE 0 SPORULATION PROTEIN F; "
82: 2OBN-A 5.3 9.5 131 342 15 HYPOTHETICAL PROTEIN; "
83: 2GEJ-A 5.3 3.3 109 361 8 PHOSPHATIDYLINOSITOL MANNOSYLTRANSFERASE (PIMA); "
84: 1NY5-A 5.3 4.7 110 384 10 TRANSCRIPTIONAL REGULATOR (NTRC FAMILY); "
85: 1F48-A 5.3 5.6 132 548 16 ARSENITE-TRANSLOCATING ATPASE; "
86: 2FZV-A 5.2 4.6 127 235 6 PUTATIVE ARSENICAL RESISTANCE PROTEIN; "
87: 1QO0-D 5.2 4.6 110 189 12 AMIC; "
88: 1KJN-A 5.2 3.0 101 152 7 MTH0777; "
89: 1FX1-A 5.2 3.9 114 147 11 FLAVODOXIN; "
90: 1E9F-A 5.2 4.4 113 201 12 THYMIDYLATE KINASE; "
91: 2GSW-A 5.1 3.6 116 168 9 YHDA; "
92: 2I2X-B 5.0 4.7 124 258 9 METHYLTRANSFERASE 1; "
93: 2BMV-A 5.0 3.9 111 163 11 FLAVODOXIN; "
94: 1KGD-A 5.0 3.7 99 175 12 PERIPHERAL PLASMA MEMBRANE CASK; "
95: 2NWQ-A 4.9 3.9 120 229 7 PROBABLE SHORT-CHAIN DEHYDROGENASE; "
96: 2F1R-A 4.9 3.5 88 148 15 MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS "
97: 1VHL-A 4.9 4.4 103 208 16 DEPHOSPHO-COA KINASE; "
98: 1LW7-A 4.9 7.7 136 344 10 TRANSCRIPTIONAL REGULATOR NADR; "
99: 1IVN-A 4.9 3.4 109 178 8 THIOESTERASE I; "
100: 2V40-A 4.8 3.5 125 419 12 ADENYLOSUCCINATE SYNTHETASE ISOZYME 2; "
101: 1ZWK-A 4.8 3.9 119 169 8 TRP REPRESSOR BINDING PROTEIN WRBA; "
102: 1TMK-A 4.8 5.3 117 204 10 THYMIDYLATE KINASE; "
103: 1R8J-A 4.8 3.7 106 272 15 KAIA; "
104: 1A2O-A 4.8 7.9 113 347 5 CHEB METHYLESTERASE; "
105: 2PH1-A 4.6 4.0 114 247 13 NUCLEOTIDE-BINDING PROTEIN; "
106: 2IZ5-A 4.6 3.3 100 160 14 MOCO CARRIER PROTEIN; "
107: 2G77-B 4.6 3.4 113 173 9 GTPASE-ACTIVATING PROTEIN GYP1; "
108: 2FW1-A 4.6 3.2 102 159 13 N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE MUTASE; "
109: 2FR0-A 4.6 3.7 106 468 11 ERYTHROMYCIN SYNTHASE, ERYAI; "
110: 1YDG-A 4.6 3.7 119 201 9 TRP REPRESSOR BINDING PROTEIN WRBA; "
111: 1RTT-A 4.6 3.5 107 174 9 CONSERVED HYPOTHETICAL PROTEIN; "
112: 1KHT-A 4.6 3.8 106 190 15 ADENYLATE KINASE; "
113: 1G5Q-A 4.6 3.7 115 174 11 EPIDERMIN MODIFYING ENZYME EPID; "
114: 1E20-A 4.6 4.2 120 185 10 HALOTOLERANCE PROTEIN HAL3; "
115: 2BWJ-A 4.5 5.1 107 196 7 ADENYLATE KINASE 5; "
116: 2BTO-A 4.5 4.7 129 413 12 TUBULIN BTUBA; "
117: 2AXP-A 4.5 4.0 101 172 12 HYPOTHETICAL PROTEIN BSU20280; "
118: 1W25-A 4.5 5.5 118 454 8 STALKED-CELL DIFFERENTIATION CONTROLLING PROTEIN; "
119: 1UXO-A 4.5 3.4 111 186 10 YDEN PROTEIN; "
120: 2JAS-A 4.4 5.1 102 194 13 DEOXYGUANOSINE KINASE; "
121: 2FCR-A 4.4 4.1 115 173 5 FLAVODOXIN; "
122: 2D7U-A 4.4 3.5 118 321 13 ADENYLOSUCCINATE SYNTHETASE; "
123: 2ARK-A 4.4 4.1 122 187 5 FLAVODOXIN; "
124: 1TO6-A 4.4 3.3 99 371 5 GLYCERATE KINASE; "
125: 1T0B-A 4.4 4.2 114 240 14 THUA-LIKE PROTEIN; "
126: 1RKB-A 4.4 4.2 100 173 16 PROTEIN AD-004; "
127: 1E1C-A 4.4 15.8 120 727 13 METHYLMALONYL-COA MUTASE ALPHA CHAIN; "
128: 2FFE-A 4.3 3.6 115 309 11 LPPG:FO 2-PHOPSPHO-L-LACTATE TRANSFERASE; "
129: 2ABW-A 4.3 3.2 94 216 6 PDX2 PROTEIN; "
130: 1YL5-A 4.3 3.4 95 247 15 DIHYDRODIPICOLINATE REDUCTASE; "
131: 1Y63-A 4.3 3.6 93 168 13 LMAJ004144AAA PROTEIN; "
132: 1W5F-A 4.3 6.0 113 315 9 CELL DIVISION PROTEIN FTSZ; "
133: 1RRV-A 4.3 3.0 105 401 10 GLYCOSYLTRANSFERASE GTFD; "
134: 2P62-A 4.2 3.9 103 241 8 HYPOTHETICAL PROTEIN PH0156; "
135: 2D3T-A 4.2 11.5 130 708 7 FATTY OXIDATION COMPLEX ALPHA SUBUNIT; "
136: 1ZMB-A 4.2 3.9 133 284 8 ACETYLXYLAN ESTERASE RELATED ENZYME; "
137: 1DG3-A 4.2 4.0 134 540 11 PROTEIN (INTERFERON-INDUCED GUANYLATE-BINDING "
138: 2P6P-A 4.1 3.9 107 382 8 GLYCOSYL TRANSFERASE; "
139: 2AR7-A 4.1 4.6 102 221 8 ADENYLATE KINASE 4; "
140: 1TEX-A 4.1 4.8 110 239 8 STF0 SULFOTRANSFERASE; "
141: 1ESC-A 4.1 3.3 117 302 12 ESTERASE; "
142: 1DZ3-A 4.1 3.3 89 123 11 STAGE 0 SPORULATION PROTEIN A; "
143: 1C4K-A 4.1 3.6 100 728 11 PROTEIN (ORNITHINE DECARBOXYLASE); "
144: 2C1X-A 4.0 3.7 109 434 11 UDP-GLUCOSE FLAVONOID 3-O GLYCOSYLTRANSFERASE; "
145: 1ZAK-A 4.0 4.1 98 220 17 ADENYLATE KINASE; "
146: 1Y81-A 4.0 3.3 84 116 20 CONSERVED HYPOTHETICAL PROTEIN; "
147: 1S8N-A 4.0 4.8 98 190 7 PUTATIVE ANTITERMINATOR; "
148: 1P3J-A 4.0 4.3 93 212 13 ADENYLATE KINASE; "
149: 1NST-A 4.0 4.2 104 282 8 HEPARAN SULFATE N-DEACETYLASE/N-SULFOTRANSFERASE; "
150: 1JV2-B 4.0 11.8 133 539 8 INTEGRIN, ALPHA V; "
151: 1G3U-A 4.0 4.7 97 208 14 THYMIDYLATE KINASE; "
152: 2F1K-A 3.9 3.2 94 279 13 PREPHENATE DEHYDROGENASE; "
153: 2AG8-A 3.9 3.3 89 263 9 PYRROLINE-5-CARBOXYLATE REDUCTASE; "
154: 1Z0S-A 3.9 2.9 81 248 15 PROBABLE INORGANIC POLYPHOSPHATE/ATP-NAD KINASE; "
155: 1RLU-A 3.9 3.8 112 305 6 CELL DIVISION PROTEIN FTSZ; "
156: 1JXM-A 3.9 4.6 109 264 13 POSTSYNAPTIC DENSITY PROTEIN; "
157: 1JVN-A 3.9 4.0 108 537 10 BIFUNCTIONAL HISTIDINE BIOSYNTHESIS PROTEIN "
158: 1BYK-A 3.9 3.4 90 255 8 PROTEIN (TREHALOSE OPERON REPRESSOR); "
159: 2J28-9 3.8 3.6 108 430 17 4.5S SIGNAL RECOGNITION PARTICLE RNA; "
160: 2F6R-A 3.8 3.8 96 230 10 BIFUNCTIONAL COENZYME A SYNTHASE; "
161: 1UKY-A 3.8 3.8 95 196 13 URIDYLATE KINASE; "
162: 1MJG-A 3.8 13.8 100 672 7 CARBON MONOXIDE DEHYDROGENASE BETA SUBUNIT; "
163: 1EX1-A 3.8 16.5 118 602 11 PROTEIN (BETA-D-GLUCAN EXOHYDROLASE ISOENZYME "
164: 2QQ5-A 3.7 3.7 111 238 10 DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 1; "
165: 2CSU-A 3.7 12.4 126 435 6 457AA LONG HYPOTHETICAL PROTEIN; "
166: 1VIM-A 3.7 2.9 86 192 8 HYPOTHETICAL PROTEIN AF1796; "
167: 1RCU-A 3.7 3.4 94 170 14 CONSERVED HYPOTHETICAL PROTEIN VT76; "
168: 1DEK-A 3.7 4.5 90 241 12 DEOXYNUCLEOSIDE MONOPHOSPHATE KINASE; "
169: 2PQ6-A 3.6 3.4 108 443 12 UDP-GLUCURONOSYL/UDP-GLUCOSYLTRANSFERASE; "
170: 2P91-A 3.6 3.8 116 254 13 ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; "
171: 2HZB-A 3.6 4.0 114 311 15 HYPOTHETICAL UPF0052 PROTEIN BH3568; "
172: 2HO3-A 3.6 3.9 98 303 8 OXIDOREDUCTASE, GFO/IDH/MOCA FAMILY; "
173: 2H8G-A 3.6 5.0 112 246 11 5'-METHYLTHIOADENOSINE NUCLEOSIDASE; "
174: 2BIS-A 3.6 3.5 97 440 10 GLGA GLYCOGEN SYNTHASE; "
175: 1WCW-A 3.6 3.7 90 254 16 UROPORPHYRINOGEN III SYNTHASE; "
176: 1TIK-A 3.6 4.3 109 203 7 ACYL CARRIER PROTEIN PHOSPHODIESTERASE; "
177: 1S4Q-A 3.6 4.0 95 183 17 GUANYLATE KINASE; "
178: 1P2F-A 3.6 3.5 94 217 11 RESPONSE REGULATOR; "
179: 1O5O-A 3.6 3.7 99 210 8 URACIL PHOSPHORIBOSYLTRANSFERASE; "
180: 1K7Y-A 3.6 3.5 105 577 10 METHIONINE SYNTHASE; "
181: 1J2R-A 3.6 3.6 96 188 11 HYPOTHETICAL ISOCHORISMATASE FAMILY PROTEIN YECD; "
182: 2PV7-A 3.5 3.8 98 277 7 T-PROTEIN [INCLUDES: CHORISMATE MUTASE (EC "
183: 2H0A-A 3.5 2.9 76 258 18 TRANSCRIPTIONAL REGULATOR; "
184: 2BF4-A 3.5 4.2 108 645 5 NADPH-CYTOCHROME P450 REDUCTASE; "
185: 2A0W-A 3.5 4.3 111 282 8 PURINE NUCLEOSIDE PHOSPHORYLASE; "
186: 1W30-A 3.5 3.2 91 174 11 PYRR BIFUNCTIONAL PROTEIN; "
187: 1VKJ-A 3.5 3.9 107 258 7 HEPARAN SULFATE (GLUCOSAMINE) 3-O- "
188: 1SEV-A 3.5 3.6 112 313 7 MALATE DEHYDROGENASE, GLYOXYSOMAL PRECURSOR; "
189: 1NVM-B 3.5 4.1 107 312 9 4-HYDROXY-2-OXOVALERATE ALDOLASE; "
190: 1BDH-A 3.5 4.4 98 338 8 PROTEIN (PURINE REPRESSOR); "
191: 2Q4E-A 3.4 3.5 94 343 6 PROBABLE OXIDOREDUCTASE AT4G09670; "
192: 2OKG-A 3.4 4.4 112 249 16 CENTRAL GLYCOLYTIC GENE REGULATOR; "
193: 2IZZ-A 3.4 3.8 90 272 16 PYRROLINE-5-CARBOXYLATE REDUCTASE 1; "
194: 1WL8-A 3.4 4.4 103 186 8 GMP SYNTHASE [GLUTAMINE-HYDROLYZING] SUBUNIT A; "
195: 1WEK-A 3.4 3.7 98 208 11 HYPOTHETICAL PROTEIN TT1465; "
196: 1VJG-A 3.4 3.7 108 201 5 PUTATIVE LIPASE FROM THE G-D-S-L FAMILY; "
197: 1SNY-A 3.4 3.5 110 248 8 SNIFFER CG10964-PA; "
198: 1S96-A 3.4 4.4 102 205 11 GUANYLATE KINASE; "
199: 1IMJ-A 3.4 3.7 110 208 9 CCG1-INTERACTING FACTOR B; "
200: 1EQ2-A 3.4 3.9 101 273 15 ADP-L-GLYCERO-D-MANNOHEPTOSE 6-EPIMERASE; "
201: 1BD3-A 3.4 6.2 109 224 9 URACIL PHOSPHORIBOSYLTRANSFERASE; "
202: 2OFP-A 3.3 2.9 88 293 7 KETOPANTOATE REDUCTASE; "
203: 2CB0-A 3.3 3.1 86 320 14 GLUCOSAMINE-FRUCTOSE-6-PHOSPHATE "
204: 1VIA-A 3.3 4.0 83 161 13 SHIKIMATE KINASE; "
205: 1T35-A 3.3 4.2 98 179 6 HYPOTHETICAL PROTEIN YVDD, PUTATIVE LYSINE "
206: 1P5J-A 3.3 3.5 105 319 11 L-SERINE DEHYDRATASE; "
207: 1NW4-A 3.3 4.5 116 243 9 URIDINE PHOSPHORYLASE, PUTATIVE; "
208: 1LVG-A 3.3 4.8 97 190 18 GUANYLATE KINASE; "
209: 1FSZ-A 3.3 6.6 122 334 9 FTSZ; "
210: 1E1D-A 3.3 3.8 88 553 7 HYBRID CLUSTER PROTEIN; "
211: 2AMJ-A 3.2 3.3 104 180 13 MODULATOR OF DRUG ACTIVITY B; "
212: 1YBF-A 3.2 5.1 113 240 14 AMP NUCLEOSIDASE; "
213: 1V19-A 3.2 3.9 110 301 11 2-KETO-3-DEOXYGLUCONATE KINASE; "
214: 1ID1-A 3.2 3.5 85 153 9 PUTATIVE POTASSIUM CHANNEL PROTEIN; "
215: 2PTH-A 3.1 3.7 99 193 7 PEPTIDYL-TRNA HYDROLASE; "
216: 2NVO-A 3.1 10.6 110 496 11 RO SIXTY-RELATED PROTEIN, RSR; "
217: 2BES-A 3.1 3.6 87 157 9 CARBOHYDRATE-PHOSPHATE ISOMERASE; "
218: 2AML-A 3.1 3.4 87 366 3 SIS DOMAIN PROTEIN; "
219: 1Y0B-A 3.1 2.8 87 193 9 XANTHINE PHOSPHORIBOSYLTRANSFERASE; "
220: 1RZU-A 3.1 4.0 95 477 6 GLYCOGEN SYNTHASE 1; "
221: 1RYB-A 3.1 3.9 104 186 13 CRS2; "
222: 1E6C-A 3.1 4.3 85 170 11 SHIKIMATE KINASE; "
223: 4TMK-A 3.0 5.4 107 210 11 PROTEIN (THYMIDYLATE KINASE); "
224: 2Q5C-A 3.0 4.6 98 187 14 NTRC FAMILY TRANSCRIPTIONAL REGULATOR; "
225: 2OCZ-A 3.0 6.5 91 218 9 3-DEHYDROQUINATE DEHYDRATASE; "
226: 2IYF-A 3.0 3.5 93 383 5 OLEANDOMYCIN GLYCOSYLTRANSFERASE; "
227: 2IOF-A 3.0 3.5 98 256 9 PHOSPHONOACETALDEHYDE HYDROLASE; "
228: 2I1W-A 3.0 6.6 81 257 9 PROBABLE INORGANIC POLYPHOSPHATE/ATP-NAD KINASE "
229: 2HYI-C 3.0 3.0 92 392 4 PROTEIN MAGO NASHI HOMOLOG; "
230: 2HI0-A 3.0 3.3 91 240 8 PUTATIVE PHOSPHOGLYCOLATE PHOSPHATASE; "
231: 2HDW-A 3.0 3.8 116 321 9 HYPOTHETICAL PROTEIN PA2218; "
232: 2BDT-A 3.0 4.2 84 172 13 BH3686; "
233: 2A3N-A 3.0 3.4 91 336 10 PUTATIVE GLUCOSAMINE-FRUCTOSE-6-PHOSPHATE "
234: 1ZUH-A 3.0 4.3 82 151 12 SHIKIMATE KINASE; "
235: 1X92-A 3.0 3.7 90 194 7 PHOSPHOHEPTOSE ISOMERASE; "
236: 1V8E-A 3.0 3.5 88 217 7 PUTATIVE GLYCEROPHOSPHORYL DIESTER "
237: 1TXG-A 3.0 3.2 90 335 11 GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(P)+]; "
238: 1KNQ-A 3.0 4.2 88 171 13 GLUCONATE KINASE; "
239: 1K2W-A 3.0 3.8 110 256 11 SORBITOL DEHYDROGENASE; "
240: 1JMK-C 3.0 3.8 101 222 8 SURFACTIN SYNTHETASE; "
241: 1FIU-A 3.0 3.7 106 286 9 TYPE II RESTRICTION ENZYME NGOMI; "
242: 1BSV-A 3.0 3.8 104 317 6 PROTEIN (GDP-FUCOSE SYNTHETASE); "
243: 1AUG-A 3.0 4.2 103 210 12 PYROGLUTAMYL PEPTIDASE-1; "
244: 2NW0-A 2.9 3.8 98 189 6 PLYB; "
245: 2IUE-A 2.9 3.6 107 212 15 PACTOLUS I-DOMAIN; "
246: 2AEE-A 2.9 2.7 75 206 8 OROTATE PHOSPHORIBOSYLTRANSFERASE; "
247: 2ACW-A 2.9 3.8 112 461 5 TRITERPENE UDP-GLUCOSYL TRANSFERASE UGT71G1; "
248: 2A67-A 2.9 4.0 88 166 6 ISOCHORISMATASE FAMILY PROTEIN; "
249: 1Y37-A 2.9 3.6 109 294 5 FLUOROACETATE DEHALOGENASE; "
250: 1WMB-A 2.9 4.1 112 260 13 D(-)-3-HYDROXYBUTYRATE DEHYDROGENASE; "
251: 1W78-A 2.9 4.0 105 414 12 FOLC BIFUNCTIONAL PROTEIN; "
252: 1MH9-A 2.9 3.4 89 194 3 DEOXYRIBONUCLEOTIDASE; "
253: 1JWQ-A 2.9 3.5 90 179 11 N-ACETYLMURAMOYL-L-ALANINE AMIDASE CWLV; "
254: 1F0K-A 2.9 4.0 97 351 14 UDP-N-ACETYLGLUCOSAMINE-N-ACETYLMURAMYL- "
255: 2QCV-A 2.8 4.4 116 325 8 PUTATIVE 5-DEHYDRO-2-DEOXYGLUCONOKINASE; "
256: 2IF2-A 2.8 4.6 86 194 13 DEPHOSPHO-COA KINASE; "
257: 2HCF-A 2.8 3.2 86 225 10 HYDROLASE, HALOACID DEHALOGENASE-LIKE FAMILY; "
258: 2GRJ-A 2.8 3.5 81 179 19 DEPHOSPHO-COA KINASE; "
259: 2GFQ-A 2.8 4.0 100 288 11 UPF0204 PROTEIN PH0006; "
260: 2GFH-A 2.8 5.5 94 246 7 HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN "
261: 2EXX-A 2.8 3.4 89 305 9 HSCARG PROTEIN; "
262: 2CNB-A 2.8 3.8 105 366 5 UDP-GALACTOSE-4-EPIMERASE; "
263: 2B34-A 2.8 3.8 92 192 7 MAR1 RIBONUCLEASE; "
264: 2B1Q-A 2.8 4.2 88 244 9 HYPOTHETICAL PROTEIN SLR0953; "
265: 1XHL-A 2.8 3.8 108 274 8 SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY "
266: 1WW8-A 2.8 4.1 104 433 8 MALATE OXIDOREDUCTASE; "
267: 1PZE-A 2.8 4.1 107 323 10 LACTATE DEHYDROGENASE; "
268: 1O5Z-A 2.8 3.9 108 421 11 FOLYLPOLYGLUTAMATE SYNTHASE/DIHYDROFOLATE "
269: 1O57-A 2.8 3.1 97 270 9 PUR OPERON REPRESSOR; "
270: 1KXJ-A 2.8 3.8 95 203 6 AMIDOTRANSFERASE HISH; "
271: 1JDS-A 2.8 4.1 104 226 13 5'-METHYLTHIOADENOSINE PHOSPHORYLASE; "
272: 1G2O-A 2.8 4.1 107 262 15 PURINE NUCLEOSIDE PHOSPHORYLASE; "
273: 1EHY-A 2.8 3.5 108 282 11 PROTEIN (SOLUBLE EPOXIDE HYDROLASE); "
274: 1DJL-A 2.8 3.4 85 182 8 TRANSHYDROGENASE DIII; "
275: 1D4A-A 2.8 4.5 102 273 4 QUINONE REDUCTASE; "
276: 2NWH-A 2.7 4.3 109 307 13 CARBOHYDRATE KINASE; "
277: 1X6V-A 2.7 5.5 94 564 12 BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'- "
278: 1VHO-A 2.7 4.5 102 319 9 ENDOGLUCANASE; "
279: 1UR3-M 2.7 3.6 97 297 12 HYPOTHETICAL OXIDOREDUCTASE YDHF; "
280: 1TLL-A 2.7 4.1 101 630 10 NITRIC-OXIDE SYNTHASE, BRAIN; "
281: 1RY2-A 2.7 6.1 104 615 4 ACETYL-COENZYME A SYNTHETASE 1; "
282: 1L5X-A 2.7 3.5 93 276 9 SURVIVAL PROTEIN E; "
283: 1JKM-A 2.7 3.8 114 358 11 BREFELDIN A ESTERASE; "
284: 1J5X-A 2.7 3.9 96 319 16 GLUCOSAMINE-6-PHOSPHATE DEAMINASE; "
285: 1CKE-A 2.7 4.2 88 212 10 PROTEIN (CYTIDINE MONOPHOSPHATE KINASE); "
286: 1AHH-A 2.7 3.7 106 253 8 7 ALPHA-HYDROXYSTEROID DEHYDROGENASE; "
287: 2JI4-A 2.6 3.2 96 302 4 PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE- "
288: 2HOQ-A 2.6 3.7 95 237 8 PUTATIVE HAD-HYDROLASE PH1655; "
289: 1Y8Q-A 2.6 5.1 110 313 10 UBIQUITIN-LIKE 1 ACTIVATING ENZYME E1A; "
290: 1Y7P-A 2.6 10.4 106 212 14 HYPOTHETICAL PROTEIN AF1403; "
291: 1VA4-A 2.6 3.6 105 271 7 ARYLESTERASE; "
292: 1S6Y-A 2.6 3.5 107 416 8 6-PHOSPHO-BETA-GLUCOSIDASE; "
293: 1S2M-A 2.6 3.4 91 377 5 PUTATIVE ATP-DEPENDENT RNA HELICASE DHH1; "
294: 1QYI-A 2.6 4.2 90 380 16 HYPOTHETICAL PROTEIN; "
295: 1PSW-A 2.6 3.7 92 331 8 ADP-HEPTOSE LPS HEPTOSYLTRANSFERASE II; "
296: 1OBR-A 2.6 3.7 106 323 5 CARBOXYPEPTIDASE T; "
297: 1NBA-A 2.6 3.9 95 253 5 N-CARBAMOYLSARCOSINE AMIDOHYDROLASE; "
298: 1MQS-A 2.6 8.7 110 588 5 SLY1 PROTEIN; "
299: 1HKH-A 2.6 3.6 102 279 9 GAMMA LACTAMASE; "
300: 2DG2-A 2.5 3.5 90 232 13 APOLIPOPROTEIN A-I BINDING PROTEIN; "
301: 2DB3-A 2.5 3.6 96 420 10 ATP-DEPENDENT RNA HELICASE VASA; "
302: 2D4A-A 2.5 3.4 98 301 6 MALATE DEHYDROGENASE; "
303: 2C29-D 2.5 3.4 100 324 6 DIHYDROFLAVONOL 4-REDUCTASE; "
304: 1S1I-A 2.5 5.1 94 213 4 5.8S/25S RIBOSOMAL RNA; "
305: 1Q0R-A 2.5 3.6 105 297 8 ACLACINOMYCIN METHYLESTERASE; "
306: 1PFK-A 2.5 3.8 91 320 10 PHOSPHOFRUCTOKINASE; "
307: 1PBT-A 2.5 4.7 99 220 8 6-PHOSPHOGLUCONOLACTONASE; "
308: 1JEZ-A 2.5 3.9 95 300 4 XYLOSE REDUCTASE; "
309: 2PJD-A 2.4 3.5 81 334 9 RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE C; "
310: 2P90-A 2.4 4.8 105 269 10 HYPOTHETICAL PROTEIN CGL1923; "
311: 2J0E-A 2.4 4.3 103 263 10 6-PHOSPHOGLUCONOLACTONASE; "
312: 2IXA-A 2.4 3.1 96 426 5 ALPHA-N-ACETYLGALACTOSAMINIDASE; "
313: 2I45-A 2.4 1.9 53 96 13 HYPOTHETICAL PROTEIN; "
314: 2FQ1-A 2.4 3.7 87 279 10 ISOCHORISMATASE; "
315: 2DGD-A 2.4 4.0 97 222 10 223AA LONG HYPOTHETICAL ARYLMALONATE "
316: 2BGQ-A 2.4 4.1 95 305 2 ALDOSE REDUCTASE; "
317: 1ZGD-A 2.4 4.0 95 308 6 CHALCONE REDUCTASE; "
318: 1YCO-A 2.4 3.5 76 276 7 BRANCHED-CHAIN PHOSPHOTRANSACYLASE; "
319: 1VJR-A 2.4 3.2 81 260 17 4-NITROPHENYLPHOSPHATASE; "
320: 1VB5-A 2.4 3.5 86 274 10 TRANSLATION INITIATION FACTOR EIF-2B; "
321: 1U2X-A 2.4 4.0 116 450 7 ADP-SPECIFIC PHOSPHOFRUCTOKINASE; "
322: 1S1P-A 2.4 3.5 91 315 4 ALDO-KETO REDUCTASE FAMILY 1 MEMBER C3; "
323: 1QWK-A 2.4 3.5 91 312 7 ALDO-KETO REDUCTASE FAMILY 1 MEMBER C1; "
324: 1Q3T-A 2.4 4.0 87 223 11 CYTIDYLATE KINASE; "
325: 1PEA-A 2.4 3.5 88 368 6 AMIDASE OPERON; "
326: 1NN4-A 2.4 4.6 78 159 4 RIBOSE 5-PHOSPHATE ISOMERASE B; "
327: 1JYS-A 2.4 3.9 97 226 15 MTA/SAH NUCLEOSIDASE; "
328: 1J2T-A 2.4 4.3 100 257 5 CREATININE AMIDOHYDROLASE; "
329: 1FUI-A 2.4 3.9 91 591 10 L-FUCOSE ISOMERASE; "
330: 1DP4-A 2.4 3.5 93 425 5 ATRIAL NATRIURETIC PEPTIDE RECEPTOR A; "
331: 2QH8-A 2.3 3.7 83 297 12 UNCHARACTERIZED PROTEIN; "
332: 2P5U-A 2.3 4.1 100 311 6 UDP-GLUCOSE 4-EPIMERASE; "
333: 2OYZ-A 2.3 2.2 55 94 11 UPF0345 PROTEIN VPA0057; "
334: 2OO6-A 2.3 9.3 109 393 11 HYPOTHETICAL L-ALANINE-DL-GLUTAMATE EPIMERASE; "
335: 2IYQ-A 2.3 4.0 89 166 15 SHIKIMATE KINASE; "
336: 2I6T-A 2.3 3.3 99 280 12 UBIQUITIN-CONJUGATING ENZYME E2-LIKE ISOFORM A; "
337: 2HLZ-A 2.3 4.2 110 296 12 KETOHEXOKINASE; "
338: 2DSK-A 2.3 4.1 111 300 8 CHITINASE; "
339: 2C54-A 2.3 3.7 100 362 11 GDP-MANNOSE-3', 5'-EPIMERASE; "
340: 2AX3-A 2.3 12.6 117 490 8 HYPOTHETICAL PROTEIN TM0922; "
341: 2AKJ-A 2.3 9.0 96 535 13 FERREDOXIN--NITRITE REDUCTASE, CHLOROPLAST; "
342: 1YNS-A 2.3 3.6 83 254 7 E-1 ENZYME; "
343: 1VL0-A 2.3 3.7 100 281 8 DTDP-4-DEHYDRORHAMNOSE REDUCTASE, RFBD ORTHOLOG; "
344: 1VHJ-A 2.3 3.8 102 234 6 PURINE NUCLEOSIDE PHOSPHORYLASE; "
345: 1THT-A 2.3 4.1 114 294 10 THIOESTERASE; "
346: 1RUS-A 2.3 4.2 90 437 4 RUBISCO (RIBULOSE-1,5-BISPHOSPHATE "
347: 1OJ7-A 2.3 3.6 81 390 10 HYPOTHETICAL OXIDOREDUCTASE YQHD; "
348: 1O7D-C 2.3 3.5 65 150 9 LYSOSOMAL ALPHA-MANNOSIDASE; "
349: 1NC7-A 2.3 3.1 66 116 12 HYPOTHETICAL PROTEIN TM1070; "
350: 1MT3-A 2.3 3.7 105 293 6 PROLINE IMINOPEPTIDASE; "
351: 1MEJ-A 2.3 4.5 88 201 6 PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE; "
352: 1LH0-A 2.3 3.3 81 213 15 OMP SYNTHASE; "
353: 1HYH-A 2.3 3.7 94 297 6 L-2-HYDROXYISOCAPROATE DEHYDROGENASE; "
354: 1DT9-A 2.3 5.1 92 398 10 PROTEIN (EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR "
355: 1DQN-A 2.3 3.5 83 230 7 GUANINE PHOSPHORIBOSYLTRANSFERASE; "
356: 2Q4D-A 2.2 4.0 89 184 6 LYSINE DECARBOXYLASE-LIKE PROTEIN AT5G11950; "
357: 2PKE-A 2.2 4.0 90 233 4 HALOACID DELAHOGENASE-LIKE FAMILY HYDROLASE; "
358: 2JFF-A 2.2 9.1 98 434 15 UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE; "
359: 2HRZ-A 2.2 4.7 116 342 6 NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE; "
360: 1Z82-A 2.2 3.1 80 312 11 GLYCEROL-3-PHOSPHATE DEHYDROGENASE; "
361: 1WY5-A 2.2 3.4 84 311 14 HYPOTHETICAL UPF0072 PROTEIN AQ_1887; "
362: 1WOM-A 2.2 3.7 112 271 8 SIGMA FACTOR SIGB REGULATION PROTEIN RSBQ; "
363: 1PZ1-A 2.2 3.7 91 333 9 GENERAL STRESS PROTEIN 69; "
364: 1O0Y-A 2.2 4.2 97 251 11 DEOXYRIBOSE-PHOSPHATE ALDOLASE; "
365: 1G55-A 2.2 4.1 96 313 13 DNA CYTOSINE METHYLTRANSFERASE DNMT2; "
366: 1CPY-A 2.2 3.9 115 421 11 SERINE CARBOXYPEPTIDASE; "
367: 2Q30-A 2.1 3.0 59 105 10 UNCHARACTERIZED PROTEIN; "
368: 2FB2-A 2.1 3.6 96 328 9 MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A; "
369: 2F00-A 2.1 5.8 97 476 5 UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE; "
370: 2BFG-A 2.1 7.7 113 501 9 BETA-XYLOSIDASE; "
371: 1WPP-A 2.1 3.5 84 310 6 PROBABLE MANGANESE-DEPENDENT INORGANIC "
372: 1TA9-A 2.1 3.2 81 389 15 GLYCEROL DEHYDROGENASE; "
373: 1T5O-A 2.1 3.5 85 340 11 TRANSLATION INITIATION FACTOR EIF2B, SUBUNIT "
374: 1P9O-A 2.1 3.4 91 269 11 PHOSPHOPANTOTHENOYLCYSTEINE SYNTHETASE; "
375: 1ILV-A 2.1 3.7 81 246 14 STATIONARY-PHASE SURVIVAL PROTEIN SURE HOMOLOG; "
376: 2PFW-A 2.0 3.4 63 112 8 CUPIN 2, CONSERVED BARREL DOMAIN PROTEIN; "
377: 2F7K-A 2.0 5.6 120 323 11 PYRIDOXAL KINASE; "
378: 2A0U-A 2.0 3.3 88 374 10 INITIATION FACTOR 2B; "
379: 1ZPD-A 2.0 5.0 93 565 10 PYRUVATE DECARBOXYLASE; "
380: 1VHE-A 2.0 4.3 98 365 6 AMINOPEPTIDASE/GLUCANASE HOMOLOG; "
381: 1L1Q-A 2.0 3.1 86 181 10 ADENINE PHOSPHORIBOSYLTRANSFERASE; "
382: 1JEQ-B 2.0 6.4 102 520 8 KU70; "
-
No 1: 1UDXA MOLECULE: THE GTP-BINDING PROTEIN OBG;
DSSP leeEEEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLHHHl
Query xfvDQVKVYVKGGDGGNGXVAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTLXDFRy 60
ident | | | || | | ||||| |||||| ||||| || | |
Sbjct mfqDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLS. 59
DSSP lllLEEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLL.
DSSP LLEEELLLLLLLLLLLLLLLLLLLEEEEELLLEEEEELLLLLEEEEELLLLLEEEEELLL
Query KKHFKAIRGEHGXSKNQHGRNADDXVIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGG 120
ident | || |||| |||| | || || || | | || ||||| || ||||
Sbjct KRTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGG 119
DSSP LLLEELLLLLLLLLLLLLLLLLLLEEEEELLLEEEEELLLLLEEEEELLLLLEEEEELLL
DSSP LLLLLHHHLLLLLLLLLLLLLLLLLLLEEEEEEEEELLlleeeellllllhhhhhhhlee
Query RGGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLadvglvgfpsvgkstllsvvss 180
ident ||||| | | || | || | | |||
Sbjct AGGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLI...................... 157
DSSP LLLLLHHHHLLLLLLLLLEEELLLLLLEEEEEEEELLL......................
DSSP elleellllllllllleeeeellllleeeeeEHHHhhHHLL..LLLL.............
Query akpkiadyhfttlvpnlgxvetddgrsfvxaDLPGliEGAH..QGVG............. 225
ident
Sbjct ..........................advglVGYPnaGKSSllAAMTrahpkiapypftt 191
DSSP ..........................lleeeELLHhhLHHHhhHHHLlllleelllllll
DSSP .............lhhhHHHH.............hHHLLeeeeeeellllllllhhhhhH
Query .............lghqFLRH.............iERTRvivhvidxsglegrdpyddyL 259
ident
Sbjct lspnlgvvevseeerftLADIpgiiegasegkglgLEFL....rhiartrvllyvldaaD 247
DSSP llleeeeeellllleeeEEELllllllhhhlllllHHHH....hhhlllleeeeeeellL
DSSP HHHHHHHhllllLLLLlllleeellllllhhhhhhhhhhhllllllllllllllllllhh
Query TINQELSeynlrLTERpqiivankxdxpeaaenleafkekltddypvfpisavtreglre 319
ident | |
Sbjct EPLKTLE....tLRKE............................................ 259
DSSP LHHHHHH....hHHHH............................................
DSSP hhhhHHHHH...................................................
Query llfeVANQL................................................... 328
ident |
Sbjct .vgaYDPALlrrpslvalnkvdlleeeavkaladalareglavlpvsaltgaglpalkea 318
DSSP .hhhHLHHHhhlleeeeeellllllhhhhhhhhhhhhllllleeellllllllhhhhhhh
DSSP ............................................................
Query ............................................................ 328
ident
Sbjct lhalvrstpppempkpvpqagvevvpvaegvyevrapeverylarikgdlmeaagylqev 378
DSSP hhhhhhlllllllllllllllleeeeeelleeeeelhhhhhhhlleeellhhhhhhhhhh
DSSP ....................llllllllllllll
Query ....................entpefplydeeel 342
ident
Sbjct frrqgveaalrakgvragdlvrigglefeyipev 412
DSSP hhhllhhhhhhlllllllleeeelleeeelllll
No 2: 2E87A MOLECULE: HYPOTHETICAL PROTEIN PH1320;
DSSP leeEEEE........eeeellllllllllllLLLLLL.........lLLLLlllllllll
Query xfvDQVK........vyvkggdggngxvafrREKYVP.........kGGPAggdggkggd 43
ident |
Sbjct ...XRNPferxptvltadelidkafrraekaASSFKPrgnkvkkarlREEL......... 48
DSSP ...LLLLlllllllllhhhhhhhhhhhhhhhHHLLLLlllhhhhhhhHHHH.........
DSSP eeeeellllllllhhhllleeellllllllLLLL..LLLLllleeeeellleeeeelllL
Query vvfevdeglrtlxdfrykkhfkairgehgxSKNQ..HGRNaddxvikvppgtvvtdddtK 101
ident |
Sbjct ............................rvRTVSnvVRDN.............lrkvleR 67
DSSP ............................hhHHHHhhHHHH.............hhhhhhH
DSSP LEEEEEL............lllleeeeELLL........lllllHHHLL....lLLLLL.
Query QVIADLT............ehgqraviARGG........rggrgNSRFA....tPANPA. 136
ident | | |
Sbjct TPGLSTLpkfyqelvdvlvdrdtfhkaXAGIdwairiireleerYVERIrysndPNEIAe 127
DSSP LLLHHHLlhhhhhhhhhhhlhhhhhhhHHHHhhhhhhhhhhhhhHHHHHhllllHHHHHh
DSSP .LLLL.....lLLLL............lleeeeeeeeELLLLEEEELLLLLLHHHHHHHL
Query .PQLS.....eNGEP............gkeryivlelKVLADVGLVGFPSVGKSTLLSVV 178
ident | | | |||||||
Sbjct lRRQFygrvasVLRDiddrlrylnkarevlkdlpvvdLEIPTVVIAGHPNVGKSTLLKAL 187
DSSP hHHHHhhhhhhHHHHlhhhhhhhhhhhhhhhhlllllLLLLEEEEELLLLLLHHHHHHHH
DSSP EEE.LLEEllllllLLLLLEEEEELlLLLEEEEEEHHH..hhhhllLLLLLHHHHHHHHH
Query SSA.KPKIadyhftTLVPNLGXVETdDGRSFVXADLPG..liegahQGVGLGHQFLRHIE 235
ident | | | | | | || |
Sbjct TTAkPEIA.sypftTRGINVGQFED.GYFRYQIIDTPGlldrpiseRNEIEKQAILALRY 245
DSSP LLLlLEEE.lllllLLLEEEEEEEE.LLEEEEEEELLLllllllllLLHHHHHHHHHHHH
DSSP HLLEEEEEEELLLLlLLLHHHHHHHHHHHHHhlllLLLLLLLLLEEELLLLLLhHHHHHH
Query RTRVIVHVIDXSGLeGRDPYDDYLTINQELSeynlRLTERPQIIVANKXDXPEaAENLEA 295
ident | | | | | | || | ||
Sbjct LGNLIIYIFDPSEHcGFPLEEQIHLFEEVHG....EFKDLPFLVVINKIDVAD.EENIKR 300
DSSP LLLEEEEEELLLLLlLLLHHHHHHHHHHHHH....HLLLLLEEEEELLLLLLL.HHHHHH
DSSP HHHHL.LLLLLLLLLLLLLLlLLHHHHHHHHHHHLLL........lllllllllll
Query FKEKL.TDDYPVFPISAVTReGLRELLFEVANQLENT........pefplydeeel 342
ident ||| | | |
Sbjct LEKFVkEKGLNPIKISALKGtGIDLVKEEIIKTLRPLaekvarekierelrryrsy 356
DSSP HHHHHhHLLLLLEELLLLLLlLHHHHHHHHHHHHHHHhhhhhhhhhhhhhllllll
No 3: 1Z22A MOLECULE: RAS-RELATED PROTEIN RAB-23;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident || ||||
Sbjct ....................................vaiKMVVVGNGAVGKSSMIQRYCK 24
DSSP ....................................leeEEEEELLLLLLHHHHHHHHHH
DSSP elleellllllLLLLLEEEEELLL...LLEEEEEEHHhhhHHLLlllllhhHHHHHHHHL
Query akpkiadyhftTLVPNLGXVETDD...GRSFVXADLPgliEGAHqgvglghQFLRHIERT 237
ident | | |
Sbjct ..giftkdykkTIGVDFLERQIQVndeDVRLMLWDTAgqeEFDA.......ITKAYYRGA 75
DSSP ..lllllllllLLLLLEEEEEEELlllEEEEEEEELLlllLLLH.......HHHHHHLLL
DSSP LEEEEEEELLLlllLLHHHHHHHHHHHHHhlLLLLlLLLLLLEEELLL.LLLHHHHHHHH
Query RVIVHVIDXSGlegRDPYDDYLTINQELSeyNLRLtERPQIIVANKXD.XPEAAENLEAF 296
ident | | | | | || | |
Sbjct QACVLVFSTTD...RESFEAISSWREKVV..AEVG.DIPTALVQNKIDlLDDSCIKNEEA 129
DSSP LEEEEEEELLL...HHHHHLHHHHHHHHH..HHHL.LLLEEEEEELHHhHHHLLLLHHHH
DSSP HHH.LLLLLLLLLLLLLLLlLLHHHHHHHHHHHLLllllllllllll
Query KEK.LTDDYPVFPISAVTReGLRELLFEVANQLENtpefplydeeel 342
ident | | |
Sbjct EGLaKRLKLRFYRTSVKEDlNVSEVFKYLAEKHLQ............ 164
DSSP HHHhHHHLLEEEELLLLLLlLLHHHHHHHHHHHHL............
No 4: 1XTQA MOLECULE: GTP-BINDING PROTEIN RHEB;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeelLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdEGLRtlxdfry 60
ident
Sbjct .................................................QSKS....... 4
DSSP .................................................LLEE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 4
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | ||||| |
Sbjct ......................................rKIAILGYRSVGKSSLTIQFVE 26
DSSP ......................................eEEEEEELLLLLHHHHHHHHHH
DSSP elleellllllllLLLEEEEELLL...LLEEEEEEHH.....hhHHHLllllllhhhhhh
Query akpkiadyhfttlVPNLGXVETDD...GRSFVXADLP.....glIEGAhqgvglghqflr 232
ident | |
Sbjct ...gqfvdsydptIENTFTKLITVngqEYHLQLVDTAgqdeysiFPQT............ 71
DSSP ...llllllllllLLEEEEEEEEElleEEEEEEEELLlllllllLLHH............
DSSP hHHHLLEEEEEEELLLlllLLHHHHHHHHHHHHHHLLLLllLLLLLLEEELLLL.LLHHh
Query hIERTRVIVHVIDXSGlegRDPYDDYLTINQELSEYNLRltERPQIIVANKXDX.PEAAe 291
ident | | | | | || | |
Sbjct ySIDINGYILVYSVTS...IKSFEVIKVIHGKLLDMVGK.vQIPIMLVGNKKDLhMERV. 126
DSSP hLLLLLEEEEEEELLL...HHHHHHHHHHHHHHHHHHLL.lLLLEEEEEELLLLhHHLL.
DSSP HHHHHHHHL..LLLLLLLLLLLLLLLLLHHHHHHHHHHHLLLLllllllllll
Query NLEAFKEKL..TDDYPVFPISAVTREGLRELLFEVANQLENTPefplydeeel 342
ident | || |
Sbjct ISYEEGKALaeSWNAAFLESSAKENQTAVDVFRRIILEAEKLE.......... 169
DSSP LLHHHHHHHhhHHLLEEEELLLLLHHHHHHHHHHHHHHHHHHL..........
No 5: 1T91A MOLECULE: RAS-RELATED PROTEIN RAB-7;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | | ||| |
Sbjct ....................................vllKVIILGDSGVGKTSLMNQYVN 24
DSSP ....................................leeEEEEELLLLLLHHHHHHHHHH
DSSP elleelllllllllLLEEEEELLL...LLEEEEEEHH..hhhHHLLlllllhhhhHHHHH
Query akpkiadyhfttlvPNLGXVETDD...GRSFVXADLP..gliEGAHqgvglghqfLRHIE 235
ident | |
Sbjct ..kkfsnqykatigADFLTKEVMVddrLVTMQIWDTAglerfQSLG.........VAFYR 73
DSSP ..llllllllllllEEEEEEEEELlllEEEEEEEEELllhhhLLLL.........LLLLL
DSSP HLLEEEEEEELLLlllLLHHHHHHHHHHHHHHLlLLLL...LLLLLLEEELLLLLLHHHH
Query RTRVIVHVIDXSGlegRDPYDDYLTINQELSEYnLRLT...ERPQIIVANKXDXPEAAEN 292
ident | | | | | || |
Sbjct GADCCVLVFDVTA...PNTFKTLDSWRDEFLIQ.ASPRdpeNFPFVVLGNKIDLENRQVA 129
DSSP LLLEEEEEEELLL...HHHHHLHHHHHHHHHHH.HLLLlhhHLLEEEEEELLLLLLLLLL
DSSP HHHHHHH.LLLL.LLLLLLL.LLLLlLLHHHHHHHHHHHLLLLllllllllll
Query LEAFKEK.LTDD.YPVFPIS.AVTReGLRELLFEVANQLENTPefplydeeel 342
ident | | | |
Sbjct TKRAQAWcYSKNnIPYFETSaKEAI.NVEQAFQTIARNALKQE.....tevel 176
DSSP HHHHHHHhHHLLlLLEEELLlLLLL.LHHHHHHHHHHHHHHHH.....hhhhl
No 6: 2G3YA MOLECULE: GTP-BINDING PROTEIN GEM;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeelLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdEGLRtlxdfry 60
ident
Sbjct .................................................NTYY....... 4
DSSP .................................................LLEE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 4
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | | | ||||||
Sbjct .......................................RVVLIGEQGVGKSTLANIFAG 25
DSSP .......................................EEEEELLLLLLHHHHHHHHHL
DSSP ELleellllllllLLLEEEEELLL...LLEEEEEEHH..HHHHHLLLllllhhhhhhhHH
Query AKpkiadyhfttlVPNLGXVETDD...GRSFVXADLP..GLIEGAHQgvglghqflrhIE 235
ident |
Sbjct VH....dsmdsdlGEDTYERTLMVdgeSATIILLDMWenKGENEWLH........dhcMQ 73
DSSP LL....lllllllLLLEEEEEEEElleEEEEEEELLLllLHHHHHHH........hllLL
DSSP HLLEEEEEEELLLlllLLHHHHHHHHHHHHHHlLLLLLLLLLLLEEELLL.LLLHhHHHH
Query RTRVIVHVIDXSGlegRDPYDDYLTINQELSEyNLRLTERPQIIVANKXD.XPEAaENLE 294
ident | | | | | | || | |
Sbjct VGDAYLIVYSITD...RASFEKASELRIQLRR.ARQTEDIPIILVGNKSDlVRCR.EVSV 128
DSSP LLLEEEEEEELLL...HHHHHHHHHHHHHHHL.LHHHLLLLEEEEEELLLlHHHL.LLLH
DSSP HHHHHL..LLLLLLLLLL.LLLLlLLHHHHHHHHHHHLLLLllllllllll
Query AFKEKL..TDDYPVFPIS.AVTReGLRELLFEVANQLENTPefplydeeel 342
ident | | || || |
Sbjct SEGRACavVFDCKFIETSaAVQH.NVKELFEGIVRQVRLRR.........d 169
DSSP HHHHHHhhHHLLEEEELLlLLLL.LHHHHHHHHHHHHHHHL.........l
No 7: 2BOVA MOLECULE: RAS-RELATED PROTEIN RAL-A;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeelLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdEGLRtlxdfry 60
ident
Sbjct .................................................SLAL....... 4
DSSP .................................................LLLE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 4
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | || |||| |
Sbjct ......................................hKVIMVGSGGVGKSALTLQFMY 26
DSSP ......................................eEEEEELLLLLLHHHHHHHHHH
DSSP elleellllllllLLLEEEEELLL...LLEEEEEEHHhhhHHLLlllllhhhhhHHHHHL
Query akpkiadyhfttlVPNLGXVETDD...GRSFVXADLPgliEGAHqgvglghqflRHIERT 237
ident | |
Sbjct ...defvedyeptKADSYRKKVVLdgeEVQIDILDTAgqeDYAA.......irdNYFRSG 76
DSSP ...llllllllllLLEEEEEEEEElleEEEEEEEELLlllLLHH.......hhhHHHHHL
DSSP LEEEEEEELLLlllLLHHHHHHHHHHHHHHLLLLlLLLLLLLEEELLL.LLLHHhHHHHH
Query RVIVHVIDXSGlegRDPYDDYLTINQELSEYNLRlTERPQIIVANKXD.XPEAAeNLEAF 296
ident | | | || | |
Sbjct EGFLCVFSITE...MESFAATADFREQILRVKED.ENVPFLLVGNKSDlEDKRQvSVEEA 132
DSSP LEEEEEEELLL...HHHHHHHHHHHHHHHHHLLL.LLLLEEEEEELLLlHHHLLlLHHHH
DSSP HHH.LLLLLLLLLLLLLLLlLLHHHHHHHHHHHLLLLllllllllll
Query KEK.LTDDYPVFPISAVTReGLRELLFEVANQLENTPefplydeeel 342
ident | || || |
Sbjct KNRaEQWNVNYVETSAKTRaNVDKVFFDLMREIRARK......meds 173
DSSP HHHhHHHLLEEEEELLLLLlLHHHHHHHHHHHHHHHH......hhhl
No 8: 1WXQA MOLECULE: GTP-BINDING PROTEIN;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | || | ||||| |
Sbjct ......................................xEIGVVGKPNVGKSTFFSAATL 22
DSSP ......................................lEEEEEELLLLLHHHHHHHHHL
DSSP elleelllllllllLLEEEEELLL.......................LLEEEEEEHHHHH
Query akpkiadyhfttlvPNLGXVETDD.......................GRSFVXADLPGLI 217
ident | | | | |
Sbjct ..............ANVGVTYAITdhpckelgcspnpqnyeyrnglaLIPVKXVDVAFLD 68
DSSP ..............LLEEEEEEEEelllllllllllllllleelleeEEEEEEEELLLLL
DSSP hhlllllllhhhhhhhHHHLLEEEEEEELLLL........LLLLHHHHHHHHHHHHHHLL
Query egahqgvglghqflrhIERTRVIVHVIDXSGL........EGRDPYDDYLTINQELSEYN 269
ident || | | || | |
Sbjct ...............dLRXASALIHVVDATGKtdpegqptDYHDPVEDIEFLEREIDYWI 113
DSSP ...............lLLLLLEEEEEEELLLLllllllllLLLLHHHHHHHHHHHHHHHH
DSSP ............................................................
Query ............................................................ 269
ident
Sbjct ygilskgwdkfakriklqkiklesaiaehlsgigvnendvweaxhklnlpedptkwsqdd 173
DSSP hhhhhlllhhhhlllllllllhhhhhhhhlhhhlllhhhhhhhhhhllllllhhhllhhh
DSSP ......lLLLL.LLLLLEEELLLLlLHHHHHHHHHHHL.LLLLLLLLLL.LLLL......
Query ......lRLTE.RPQIIVANKXDXpEAAENLEAFKEKL.TDDYPVFPIS.AVTR...... 314
ident | | ||| | | | | | | |
Sbjct llafaseIRRVnKPXVIAANKADA.ASDEQIKRLVREEeKRGYIVIPTSaAAELtlrkaa 232
DSSP hhhhhhhHHHHhLLEEEEEELHHH.LLHHHHHHHHHHHhHLLLEEEEELhHHHHhhhlll
DSSP ........................lLLHHHHHHHHH.HHLL...................
Query ........................eGLRELLFEVAN.QLEN................... 330
ident | | | |
Sbjct kagfieyipalxvikekvldrfgstGVQEVINRVVFdLLKLipvypvhdeqfgnvlphvf 292
DSSP llllllllllllhhhhhhlllllllLHHHHHHHHHHlLLLEeeeeeelllllllllllle
DSSP ........................................llllllllllll
Query ........................................tpefplydeeel 342
ident
Sbjct lxkkgstprdlafkvhtdlgkgflyainartkrrvgedyelqfndivkivsv 344
DSSP eeellllhhhhhhhhlhhhhhleeeeeelllllllllllllllleeeeeeel
No 9: 1MKYA MOLECULE: PROBABLE GTP-BINDING PROTEIN ENGA;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | || | ||||||
Sbjct ......................................aTVLIVGRPNVGKSTLFNKLVK 22
DSSP ......................................lEEEEELLLLLLHHHHHHHHHL
DSSP elleellllllllllLEEEEELlLLLEEEEEEHHHHH.hhllLLLLLH.HHHHHHHHHLL
Query akpkiadyhfttlvpNLGXVETdDGRSFVXADLPGLI.egahQGVGLG.HQFLRHIERTR 238
ident || | | | | | |
Sbjct .............dpVQDTVEW.YGKTFKLVDTCGVFdnpqdIISQKXkEVTLNXIREAD 68
DSSP .............llLEEEEEE.LLEEEEEEELLLLLllhhhLLLHHHhHHHHHHHLLLL
DSSP EEEEEEELLLlllllHHHH.HHHHHHHHHHlllllLLLLLLLEEELLLL.LLHH.HHHHH
Query VIVHVIDXSGlegrdPYDD.YLTINQELSEynlrlTERPQIIVANKXDX.PEAA.ENLEA 295
ident | | | | |||| | |
Sbjct LVLFVVDGKR.....GITKeDESLADFLRK.....STVDTILVANKAENlREFErEVKPE 118
DSSP EEEEEEELLL.....LLLHhHHHHHHHHHH.....HLLLEEEEEELLLLhHHHHhHLHHH
DSSP HHhHLLLLlLLLLLL.LLLLlLLHHHHHHHHHHHLLL.......................
Query FKeKLTDDyPVFPIS.AVTReGLRELLFEVANQLENT....................... 331
ident | | | | | ||
Sbjct LY.SLGFG.EPIPVSaEHNI.NLDTXLETIIKKLEEKgldleskpeitdaikvaivgrpn 175
DSSP HH.HHLLL.LLEELLlLLLL.LHHHHHHHHHHHHHHLllllllllllllleeeeeellll
DSSP ............................................................
Query ............................................................ 331
ident
Sbjct vgkstlfnailnkeralvspipvddevfidgrkyvfvdtaglekysnyrvvdsiekadvv 235
DSSP llhhhhhhhhhlllleeelllllleeeeelleeeeelllllllllllhhhhhhhhhllee
DSSP ............................................................
Query ............................................................ 331
ident
Sbjct vivldatqgitrqdqrxaglxerrgrasvvvfnkwdlvvhrekrydeftklfreklyfid 295
DSSP eeeeellllllhhhhhhhhhhhhllleeeeeeelhhhlllhhhlhhhhhhhhhhhlhhhl
DSSP ........................................................llll
Query ........................................................pefp 335
ident
Sbjct yspliftsadkgwnidrxidaxnlayasyttkvpssainsalqkvlaftnlprglkiffg 355
DSSP llleeellllllllhhhhhhhhhhhhhhhlllllhhhhhhhhhhhhlllllllllleeee
DSSP LLLLLLL.............................................
Query LYDEEEL............................................. 342
ident
Sbjct VQVDIKPptflffvnsiekvknpqkiflrklirdyvfpfegspiflkfkrsr 407
DSSP EEEELLLleeeeeelllllllhhhhhhhhhhhhhhllllllllleeeeeell
No 10: 2OHFA MOLECULE: GTP-BINDING PROTEIN 9;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeelLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdEGLRtlxdfry 60
ident |
Sbjct ..............................................igrFGTS....... 7
DSSP ..............................................lllLLLL.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 7
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | || | ||||| |
Sbjct ......................................lKIGIVGLPNVGKSTFFNVLTN 29
DSSP ......................................lLEEEELLLLLLHHHHHHHHHL
DSSP elleellllllllLLLEEEEELLL................LLEEEEEEHhHHHHHlllll
Query akpkiadyhfttlVPNLGXVETDD................GRSFVXADLpGLIEGahqgv 224
ident || | | |
Sbjct .............DPNESRVPVPDerfdflcqyhkpaskiPAFLNVVDI.AGGNA..... 70
DSSP .............LLLEEEEELLLhhhhhhhhhhllleeeLLEEEEEEL.LLLLH.....
DSSP llhhhhhHHHHHLLEEEEEEELlllllLLHHHHHHHHHHHHHHLL...............
Query glghqflRHIERTRVIVHVIDXsglegRDPYDDYLTINQELSEYN............... 269
ident || | | || | | ||
Sbjct .....flSHISACDGIFHLTRA.....VDPIRDIEIIHEELQLKDeemigpiidklekva 120
DSSP .....hhHHHHLLLLEEEEEEL.....LLLHHHHHHHHHHHHHHHhhhhhhhhhllllll
DSSP ....................................lLLLLLLLLLEEELLLLL...lhH
Query ....................................lRLTERPQIIVANKXDXP...eaA 290
ident || | |
Sbjct kpeydimckvkswvidkpvrfyhdwndkeievlnkhlFLTSKPMVYLVNLSEKDyirkkN 180
DSSP llhhhhhhhhhhhlllllhhhlllllhhhhhhhhhhlLHHHLLEEEEEELLHHHhhhllL
DSSP HHHHHHHHHLL...LLLLLLLLL.LLLL....................LLLHHHHHHHHH
Query ENLEAFKEKLT...DDYPVFPIS.AVTR....................EGLRELLFEVAN 326
ident | || | | | | |
Sbjct KWLIKIKEWVDkydPGALVIPFSgALELklqelsaeerqkyleanmtqSALPKIIKAGFA 240
DSSP HHHHHHHHHHHhhlLLLEEEEELhHHHHhhhhllhhhhhhhhhhllllLLHHHHHHHHHH
DSSP HHLL........................................................
Query QLEN........................................................ 330
ident |
Sbjct ALQLeyfftagpdevrawtirkgtkapqaagkihtdfekgfimaevmkyedfkeegsena 300
DSSP HLLEeeeeeellleeeeeeeellllhhhhhhllllhhhhheeeeeeelhhhhhhhllhhh
DSSP ...............llllllllllll
Query ...............tpefplydeeel 342
ident
Sbjct vkaagkyrqqgrnyivedgdiiffkfn 327
DSSP hhhlllleeelllllllllleeeeeel
No 11: 2HXSA MOLECULE: RAS-RELATED PROTEIN RAB-28;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeELLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfeVDEGLRtlxdfry 60
ident
Sbjct ...............................................GSHMRQ....... 6
DSSP ...............................................LLLLLE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 6
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | || |
Sbjct ......................................lKIVVLGDGASGKTSLTTCFAQ 28
DSSP ......................................eEEEEELLLLLLHHHHHHHHHH
DSSP E....LLEEllllllllLLLEEEEELLL....LLEEEEEEHH.......HHHHhllllll
Query A....KPKIadyhfttlVPNLGXVETDD....GRSFVXADLP.......GLIEgahqgvg 225
ident | | |
Sbjct EtfgkQYKQ......tiGLDFFLRRITLpgnlNVTLQIWDIGgqtiggkMLDK....... 75
DSSP HhllhHHHH......llLLLEEEEEEEEllleEEEEEEEELLlllllllLHHH.......
DSSP lhhhhhhhHHHLLEEEEEEELLLlllLLHHHHHHHHHHHHHHL..LLLLlLLLLLLEEEL
Query lghqflrhIERTRVIVHVIDXSGlegRDPYDDYLTINQELSEY..NLRLtERPQIIVANK 283
ident | | | | ||
Sbjct .......yIYGAQGVLLVYDITN...YQSFENLEDWYTVVKKVseESET.QPLVALVGNK 124
DSSP .......hHLLLLEEEEEEELLL...HHHHHLHHHHHHHHHHHhhHHLL.LLEEEEEEEL
DSSP L.LLLLHHhHHHHHHHH.LLLLLLLLLLL.LLLLlLLHHHHHHHHHHHLLllllllllll
Query X.DXPEAAeNLEAFKEK.LTDDYPVFPIS.AVTReGLRELLFEVANQLENtpefplydee 340
ident | | ||
Sbjct IdLEHMRTiKPEKHLRFcQENGFSSHFVSaKTGD.SVFLCFQKVAAEILG.......ikl 176
DSSP HhHHHHLLlLHHHHHHHhHHHLLEEEEELlLLLL.LHHHHHHHHHHHHLL.......lll
DSSP ll
Query el 342
ident
Sbjct nk 178
DSSP ll
No 12: 2D74A MOLECULE: TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeelLLLLLllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdEGLRTlxdfry 60
ident
Sbjct .................................................KTRQA...... 5
DSSP .................................................LLLLL......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 5
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | || || ||
Sbjct .....................................evNIGMVGHVDHGKTTLTKALTG 28
DSSP .....................................llEEEEEELLLLLHHHHHHHHHH
DSSP .ELLEelllllLLLLLLEEEEELLL......................LLEEEEEE.....
Query .AKPKiadyhfTTLVPNLGXVETDD......................GRSFVXAD..... 212
ident | | | |
Sbjct vWTDT..lrrgITIKIGFADAEIRRcsncgrystspicpycghetefIRRVSFIDspghe 86
DSSP hHLLL..llllLLLLLEEEEEEEEEellllleellllllllllleeeEEEEEEEElllhh
DSSP .HHHHHHHlllllllhhhhhhHHHHLLEEEEEEELLLllllLHHH.HHHHHHHHHHhlLL
Query .LPGLIEGahqgvglghqflrHIERTRVIVHVIDXSGlegrDPYD.DYLTINQELSeyNL 270
ident | || |
Sbjct aLMTTMLA.............GASLMDGAILVIAANE....PCPRpQTREHLMALQ..II 127
DSSP hHHHHHHH.............LLLLLLEEEEEEELLL....LLLLhHHHHHHHHHH..HL
DSSP LLllLLLLLEEELLLLLLhHHHHHHHHHHLL........LLLLLLLLLlLLLL.LLHHHH
Query RLteRPQIIVANKXDXPEaAENLEAFKEKLT........DDYPVFPISaVTRE.GLRELL 321
ident || || | | ||| |
Sbjct GQ..KNIIIAQNKIELVD.KEKALENYRQIKefikgtvaENAPIIPIS.ALHGaNIDVLV 183
DSSP LL..LLEEEEEELHHHLL.HHHHHHHHHHHHhhhlllllLLLLEEEEL.LLLLlLHHHHH
DSSP HHHHHHHLLLL..................................llLLLL.........
Query FEVANQLENTP..................................efPLYD......... 338
ident
Sbjct KAIEEFIPTPKrdsnkppkmlvlrsfdvnkpgtppeklvggvldgsiVQGKlkvgdeiei 243
DSSP HHHHHLLLLLLllllllleeeeeeeellllllllllllllleeeeeeEELLeellleeee
DSSP ............................................................
Query ............................................................ 338
ident
Sbjct rpgvpyeehgrikyepitteivslqaggqfveeaypgglvgigtkldpyltkgdlmagnv 303
DSSP llleelllllllleelleeeeeeeeelleelleellllleeeeelllhhhhhhhllllle
DSSP .LLLL.......................................................
Query .EEEL....................................................... 342
ident
Sbjct vGKPGklppvwtdlrlevhllervvgteqelnvepikrkevlllnvgtartmglvtalgk 363
DSSP eELLLlllleeeeeeelleelllllllhhhhllllllllleeeeeelleeeeeeeeeell
DSSP ........................................
Query ........................................ 342
ident
Sbjct deielklqipvcaepgervaisrqigsrwrligygiikel 403
DSSP lleeeeeeeeeellllleeeeeelllllleeeeeeellll
No 13: 2J1LA MOLECULE: RHO-RELATED GTP-BINDING PROTEIN RHOD;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | ||| || || |
Sbjct ...................................vrsvKVVLVGDGGCGKTSLLMVFAD 25
DSSP ...................................lleeEEEEEELLLLLHHHHHHHHHL
DSSP elleelllllLLLLLLEEEEELLL...LLEEEEEEhhhhhhhlllllllhhhhhhhhhHL
Query akpkiadyhfTTLVPNLGXVETDD...GRSFVXADlpgliegahqgvglghqflrhieRT 237
ident | | | |
Sbjct ..........TPTVFERYMVNLQVkgkPVHLHIWD......................tDA 53
DSSP ..........LLLLLEEEEEEEEElleEEEEEEEE......................lLE
DSSP LEEEEEEELLLlllLLHHHHHH.HHHHHHHHLlllLLLLLLLLEEELLLLL.........
Query RVIVHVIDXSGlegRDPYDDYL.TINQELSEYnlrLTERPQIIVANKXDXP......... 287
ident | | | | | | | | |
Sbjct SVLLLCFDVTS...PNSFDNIFnRWYPEVNHF...CKKVPIIVVGCKTDLRkdkslvnkl 107
DSSP EEEEEEEELLL...HHHHHHHHhLHHHHHHHH...LLLLLEEEEEELHHHHllhhhhhhh
DSSP .....LHHHhHHHHHH.hLLLLL.LLLLLLLLLLLLLHHHHHHHHHHHLLLlllllllll
Query .....EAAEnLEAFKE.kLTDDY.PVFPISAVTREGLRELLFEVANQLENTpefplydee 340
ident | | || | |
Sbjct rrnglEPVT.YHRGQEmaRSVGAvAYLECSARLHDNVHAVFQEAAEVALSS......... 157
DSSP hhlllLLLL.HHHHHHhhHHLLLlEEEELLLLLLLLHHHHHHHHHHHHHHL.........
DSSP ll
Query el 342
ident
Sbjct .. 157
DSSP ..
No 14: 2BCGY MOLECULE: SECRETORY PATHWAY GDP DISSOCIATION INHIBITOR;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeeLLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevDEGLRtlxdfry 60
ident
Sbjct ...............................................sEYDYL....... 6
DSSP ...............................................lLLLEE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 6
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | | |||| || |
Sbjct ......................................fKLLLIGNSGVGKSCLLLRFSD 28
DSSP ......................................eEEEEEELLLLLHHHHHHHHHH
DSSP elleellllllLLLLLEEEEELLL...LLEEEEEEH.....hhhHHHLllllllhhhhhh
Query akpkiadyhftTLVPNLGXVETDD...GRSFVXADL.....pglIEGAhqgvglghqflr 232
ident | | |
Sbjct ..dtytndyisTIGVDFKIKTVELdgkTVKLQIWDTagqerfrtITSS............ 74
DSSP ..lllllllllLLLLLEEEEEEEElleEEEEEEELLllllllllLLHH............
DSSP hHHHLLEEEEEEELLLlllLLHHHHHHHHHHHHHHllLLLLLLLLLLEEELLLLL.LHHH
Query hIERTRVIVHVIDXSGlegRDPYDDYLTINQELSEynLRLTERPQIIVANKXDXP.EAAE 291
ident | | | || | || |
Sbjct yYRGSHGIIIVYDVTD...QESFNGVKMWLQEIDR..YATSTVLKLLVGNKCDLKdKRVV 129
DSSP hHLLLLEEEEEEELLL...HHHHHHHHHHHHHHHH..HLLLLLEEEEEEELLLLLlLLLL
DSSP HHHHHHHH.LLLLLLLLLLLLLLLlLLHHHHHHHHHHHLLLL.........lllllLLLL
Query NLEAFKEK.LTDDYPVFPISAVTReGLRELLFEVANQLENTP.........efplyDEEE 341
ident || | || | |
Sbjct EYDVAKEFaDANKMPFLETSALDStNVEDAFLTMARQIKESMsqqnlnettqkkedKGNV 189
DSSP LHHHHHHHhHHLLLLEEELLLLLLlLHHHHHHHHHHHHHHHLlhhhhhlllhhhllLLLL
DSSP ....l
Query ....l 342
ident
Sbjct nlkgq 194
DSSP lllll
No 15: 1ZCBA MOLECULE: G ALPHA I/13;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLE.
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVS. 179
ident | | |||| |
Sbjct ...................................arlvKILLLGAGESGKSTFLKQMRi 25
DSSP ...................................llleEEEEELLLLLLHHHHHHHHHh
DSSP .EELL.......................................................
Query .SAKP....................................................... 183
ident
Sbjct iHGQDfdqrareefrptiysnvikgmrvlvdareklhipwgdnknqlhgdklmafdtrap 85
DSSP hHLLLllhhhhhllhhhhhhhhhhhhhhhhhhhhhlllllllhhhhhhhhhhhllllllh
DSSP ............................................................
Query ............................................................ 183
ident
Sbjct maaqgmvetrvflqylpairalwedsgiqnaydrrrefqlgesvkyfldnldklgvpdyi 145
DSSP hhhlllllhhhhhhhhhhhhhhhhlhhhhhhhhlhhhllllllhhhhhllhhhhllllll
DSSP ....eellllllllLLLEEEEELlLLLEEEEEEHHhhHHHLllllllhhhhhhhHHHLLE
Query ....kiadyhfttlVPNLGXVETdDGRSFVXADLPglIEGAhqgvglghqflrhIERTRV 239
ident | | |
Sbjct psqqdillarrptkGIHEYDFEI.KNVPFKMVDVG.gWFEC.............FDSVTS 190
DSSP llhhhhhhllllllLEEEEEEEE.LLEEEEEEEEL.lLLLL.............LLLLLE
DSSP EEEEEELLLLLL........LLHHHHHHHHHHHHHHllLLLLLLLLLLEEELL.LLLL..
Query IVHVIDXSGLEG........RDPYDDYLTINQELSEynLRLTERPQIIVANKX.DXPE.. 288
ident | | | || |
Sbjct ILFLVSSSEFDQvlmedrqtNRLTESLNIFETIVNN..RVFSNVSIILFLNKTdLLEEkv 248
DSSP EEEEEELLLLLLeelleeeeEHHHHHHHHHHHHHLL..HHHLLLEEEEEEELHhHHHHhl
DSSP ..................hHHHHHHHHHHLL......lLLLLLLLLLLLLLLLHHHHHHH
Query ..................aAENLEAFKEKLT......dDYPVFPISAVTREGLRELLFEV 324
ident | | | | |
Sbjct qvvsikdyflefegdphclRDVQKFLVECFRgkrrdqqPLYHHFTTAINTENIRLVFRDV 308
DSSP llllhhhlllllllllllhHHHHHHHHHHHHlllllllLLEEEELLLLLHHHHHHHHHHH
DSSP HHHHLLLLllllllllll
Query ANQLENTPefplydeeel 342
ident
Sbjct KDTILHDN........lk 318
DSSP HHHHHHHH........hl
No 16: 1YZTA MOLECULE: RAS-RELATED PROTEIN RAB-21;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | | | ||| |
Sbjct ...................................aysfKVVLLGEGCVGKTSLVLRYCE 25
DSSP ...................................leeeEEEEELLLLLLHHHHHHHHHH
DSSP elleelllllllLLLLEEEEELLL...LLEEEEEEHHhhhhhlllllllhhhhhhhhHHL
Query akpkiadyhfttLVPNLGXVETDD...GRSFVXADLPgliegahqgvglghqflrhiERT 237
ident | |
Sbjct ..nkfndkhittLQASFLTKKLNIggkRVNLAIWDTA...................gRDS 64
DSSP ..llllllllllLLLEEEEEEEEElleEEEEEEEELL...................lLLL
DSSP LEEEEEEELLLlllLLHHHHHHHHHHHHHHllLLLLLLLLLLEEELLL.LLLHhHHHHHH
Query RVIVHVIDXSGlegRDPYDDYLTINQELSEynLRLTERPQIIVANKXD.XPEAaENLEAF 296
ident | | | || | || || | |
Sbjct NGAILVYDITD...EDSFQKVKNWVKELRK..MLGNEICLCIVGNKIDlEKER.HVSIQE 118
DSSP LEEEEEEELLL...HHHHHHHHHHHHHHHH..HHHHHLEEEEEEELHHhHHHL.LLLHHH
DSSP HHHL..LLLLLLLLLL.LLLLlLLHHHHHHHHHHHLLLlllllllllll
Query KEKL..TDDYPVFPIS.AVTReGLRELLFEVANQLENTpefplydeeel 342
ident | | | || |
Sbjct AESYaeSVGAKHYHTSaKQNK.GIEELFLDLCKRMIET........... 155
DSSP HHHHhhHLLLEEEELLlLLLL.LHHHHHHHHHHHHHHL...........
No 17: 1A2KC MOLECULE: NUCLEAR TRANSPORT FACTOR 2;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident ||| || |
Sbjct ...................................qvqfKLVLVGDGGTGKTTFVKRHLT 25
DSSP ...................................leeeEEEEEELLLLLHHHHHHLLHH
DSSP ...ELLEEllllllLLLLLEEEEELLL...LLEEEEEE.....hhhhHHHLllllllhhh
Query ...AKPKIadyhftTLVPNLGXVETDD...GRSFVXAD.....lpglIEGAhqgvglghq 229
ident | || | |
Sbjct gefEKKYV.....aTLGVEVHPLVFHTnrgPIKFNVWDtagqekfggLRDG......... 71
DSSP hhhLLEEE.....lLLLEEEEEEEEEElleEEEEEEEEellhhhlllLLHH.........
DSSP hhhhHHHLLEEEEEEELLLlllLLHHHHHHHHHHHHHHlllLLLLLLLLLEEELLLLLLH
Query flrhIERTRVIVHVIDXSGlegRDPYDDYLTINQELSEynlRLTERPQIIVANKXDXPEA 289
ident | | | | | || |
Sbjct ...yYIQAQCAIIMFDVTS...RVTYKNVPNWHRDLVR...VCENIPIVLCGNKVDIKDR 122
DSSP ...hHLLLLEEEEEEELLL...HHHHHLHHHHHHHHHH...HLLLLLEEEEEELLLLLLL
DSSP hHHHH.HHHHhLLLL.LLLLLLLLLLLlLLHHHHHHHHHHHLL.................
Query aENLE.AFKEkLTDD.YPVFPISAVTReGLRELLFEVANQLEN................. 330
ident ||| | |
Sbjct .KVKAkSIVF.HRKKnLQYYDISAKSNyNFEKPFLWLARKLIGdpnlefvampalappev 180
DSSP .LLLHhHHLL.LLLLlEEEEELLHHHLlLLLHHHHHHHHHHHLllllleeelllllllll
DSSP ....llllllllllll
Query ....tpefplydeeel 342
ident
Sbjct vmdpalaaqyehdlev 196
DSSP lllhhhhhhhhhhlll
No 18: 2Q3FA MOLECULE: RAS-RELATED GTP-BINDING PROTEIN D;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | | ||| ||
Sbjct ....................................vkpRILLXGLRRSGKSSIQKVVFH 24
DSSP ....................................lllEEEEEELLLLLHHHHHHHHHH
DSSP .elleelllllllLLLLEEEEellLLLEEEEEEhhhhhhhlllllLLHHHHHHHHHHLLE
Query .akpkiadyhfttLVPNLGXVetdDGRSFVXADlpgliegahqgvGLGHQFLRHIERTRV 239
ident | | | |
Sbjct kxspnetlflestNKICREDVsnsSFVNFQIWD....fpgqidffDPTFDYEXIFRGTGA 80
DSSP lllhhhhhhllllLLLEEEEElllLLLLEEEEE....llllllllLLLLLHHHHHHLEEE
DSSP EEEEEELLLllllLHHHHHHHHHHHHHH.lLLLLlLLLLLLEEELLLLLL...hHHHHHH
Query IVHVIDXSGlegrDPYDDYLTINQELSE.yNLRLtERPQIIVANKXDXPE...aAENLEA 295
ident ||| | | | |
Sbjct LIFVIDSQD....DYXEALARLHLTVTRayKVNT.DINFEVFIHKVDGLSddhkIETQRD 135
DSSP EEEEEELLL....LLHHHHHHHHHHHHHhhHHLL.LLEEEEEEELHHHLLllhhHHHHHH
DSSP HHHHLL..........lLLLLLLLLlLLLLLLHHHHHHHHHHHLLllllllllllll
Query FKEKLT..........dDYPVFPISaVTREGLRELLFEVANQLENtpefplydeeel 342
ident | | | |
Sbjct IHQRANddladaglekiHLSFYLTS.IYDHSIFEAFSKVVQKLIP............ 179
DSSP HHHHHHhhhhhllllllLEEEEEEL.LLLLHHHHHHHHHHHLLLL............
No 19: 1WF3A MOLECULE: GTP-BINDING PROTEIN;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeeLLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevDEGLRtlxdfry 60
ident
Sbjct ................................................EKTYS....... 5
DSSP ................................................LLLEE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 5
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | || | |||||||
Sbjct ......................................gFVAIVGKPNVGKSTLLNNLLG 27
DSSP ......................................eEEEEELLLLLLHHHHHHHHHL
DSSP E.lleelllllllLLLLEEEEELlLLLEEEEEEHH...............HHHHhlllll
Query A.kpkiadyhfttLVPNLGXVETdDGRSFVXADLP...............GLIEgahqgv 224
ident | | | | | |
Sbjct VkvapisprpqttRKRLRGILTE.GRRQIVFVDTPglhkpmdalgefmdqEVYE...... 80
DSSP LllllllllllllLLLEEEEEEE.LLEEEEEEELLlllllllhhhhhhhhHHHH......
DSSP llhhhhhhhHHHLLEEEEEEELLLllllLHHHHHHHHHHHHHhlllLLLL.LLLLLEEEL
Query glghqflrhIERTRVIVHVIDXSGlegrDPYDDYLTINQELSeynlRLTE.RPQIIVANK 283
ident | | | | | | | | ||
Sbjct ........aLADVNAVVWVVDLRH....PPTPEDELVARALK....PLVGkVPILLVGNK 124
DSSP ........hLLLLLEEEEEEELLL....LLLHHHHHHHHHHH....HHLLlLLEEEEEEL
DSSP LL.LLLHHHHHHHHHHHLlLLLLLLLLLlLLLLLLHHHHHHHHHHHL.............
Query XD.XPEAAENLEAFKEKLtDDYPVFPISaVTREGLRELLFEVANQLE............. 329
ident | | | | | | ||
Sbjct LDaAKYPEEAMKAYHELL.PEAEPRMLSaLDERQVAELKADLLALMPegpffypedyaks 183
DSSP HHhLLLHHHHHHHHHHLL.LLLEEEELLlLLHHHHHHHHHHHHLLLLlllllllllllll
DSSP ............................................................
Query ............................................................ 329
ident
Sbjct dqtfgewvaeilreeamkrlwhevpyavatkveevaerengvlyikailyverpsqkaiv 243
DSSP lllhhhhhhhhhhhhhhhlllllhhhhleeeeeeeeeellleeeeeeeeeellhhhhhhh
DSSP ........................................lllllllllllll
Query ........................................ntpefplydeeel 342
ident
Sbjct igeggrkikeigqatrkqleallgkkvyldlevkvypdwrkdpealrelgyrs 296
DSSP hlhhhhhhhhhhhhhhhhhhhhhlleeeeeeeeeelllhhhlhhhhhhhllll
No 20: 1WB1A MOLECULE: TRANSLATION ELONGATION FACTOR SELB;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeEELLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfEVDEGLRtlxdfry 60
ident
Sbjct ..............................................PHMDFKN....... 7
DSSP ..............................................LLLLLEE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 7
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLE.
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVS. 179
ident | | || || |
Sbjct ......................................iNLGIFGHIDHGKTTLSKVLTe 29
DSSP ......................................eEEEEEELLLLLHHHHHHHHHl
DSSP EELLeellllllllllleEEEELlLLLEEEEEEHH...HHHHhlllllllhhhhHHHHHH
Query SAKPkiadyhfttlvpnlGXVETdDGRSFVXADLP...GLIEgahqgvglghqfLRHIER 236
ident | | | ||
Sbjct IAGF..............SAFKL.ENYRITLVDAPghaDLIR..........avVSAADI 64
DSSP LLLL..............LEEEE.LLEEEEELLLLlhhHHHH..........hhHHHLLL
DSSP LLEEEEEEELLlllllLHHH.HHHHHHHHHHHlllllLLLLLLLEEELLLLLLhHHHHHH
Query TRVIVHVIDXSglegrDPYD.DYLTINQELSEynlrlTERPQIIVANKXDXPEaAENLEA 295
ident | | | | | | | | |
Sbjct IDLALIVVDAK.....EGPKtQTGEHMLILDH.....FNIPIIVVITKSDNAG.TEEIKR 113
DSSP LLEEEEEEELL.....LLLLhHHHHHHHHHHH.....LLLLLLEEEELLLLLL.HHHHHH
DSSP H.HHHLL........LLLLLLLLLLLLllLLHHHHHHHHHHHLLLLLLLlLLLLL.....
Query F.KEKLT........DDYPVFPISAVTreGLRELLFEVANQLENTPEFPlYDEEE..... 341
ident |||| | | || | | |
Sbjct TeMIMKSilqsthnlKNSSIIPISAKTgfGVDELKNLIITTLNNAEIIR.NTESYfkmpl 172
DSSP HhHHHHHhhhhlllhHHLLEEELLLLLllLHHHHHHHHHHHHHHLLLLL.LLLLLlllll
DSSP ............................................................
Query ............................................................ 341
ident
Sbjct dhafpikgagtvvtgtinkgivkvgdelkvlpinmstkvrsiqyfkesvmeakagdrvgm 232
DSSP lleellllllleelllllllllllleeelllllllleeellllhhhllllllllllllle
DSSP ............................................................
Query ............................................................ 341
ident
Sbjct aiqgvdakqiyrgxiltskdtklqtvdkivakikisdifkynltpkmkvhlnvgmlivpa 292
DSSP elllllllllllllllllllllllleeeeeelllllllllllllllleeeeeelleeeee
DSSP ............................................................
Query ............................................................ 341
ident
Sbjct vavpfkkvtfgkteeniilnevisgnexyxafeleekvlaevgdrvlitrldlppttlri 352
DSSP eeeeeeelllllllleeellllllllllleeeeeeeeellllllllleelllllllllll
DSSP ............................................................
Query ............................................................ 341
ident
Sbjct xghglieefkpikdlnikkevlregkvkidkgrtvidglaqskvaaekligeeisiegkd 412
DSSP llllleeelllhhhllllllleeeeeeelllllleellllllhhhhhhlllllleellll
DSSP .....................................l
Query .....................................l 342
ident
Sbjct ivgkikgtfgtkglltaefsgnvenrdkvilnrlrrwg 450
DSSP llllllllllllllllllllllllllleeeeellllll
No 21: 2P5SA MOLECULE: RAS AND EF-HAND DOMAIN CONTAINING;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelLLLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvLADVGLVGFPSVGKSTLLSVVSS 180
ident | | |||| |
Sbjct .....................................AYKIVLAGDAAVGKSSFLMRLCK 23
DSSP .....................................LEEEEEELLLLLLHHHHHHHHHH
DSSP elleelllllllllllEEEEELLL...LLEEEEEEhhhhhhhlllllllhhhhhhhhHHL
Query akpkiadyhfttlvpnLGXVETDD...GRSFVXADlpgliegahqgvglghqflrhiERT 237
ident |
Sbjct ............nefrFQMKTLIVdgeRTVLQLWD.......tagqerfrsiaksyfRKA 64
DSSP ............llllLEEEEEEElleEEEEEEEE.......lllllllhhhhhhhhHHL
DSSP LEEEEEEELLLlllLLHHHHHHHHHHHHHHLlllllLLLLLLEEELLLL........LLH
Query RVIVHVIDXSGlegRDPYDDYLTINQELSEYnlrltERPQIIVANKXDX........PEA 289
ident | | | || |
Sbjct DGVLLLYDVTC...EKSFLNIREWVDMIEDA.....AVPIMLVGNKADIrdtaategQKC 116
DSSP LEEEEEEELLL...HHHHHLHHHHHHHHHHH.....LLLEEEEEELHHHhhhhhhllLLL
DSSP HhHHHHHHHH.LLLLLLLLLLL.LLLLlLLHHHHHHHHHHHLLllllllllllll
Query AeNLEAFKEK.LTDDYPVFPIS.AVTReGLRELLFEVANQLENtpefplydeeel 342
ident | | | |
Sbjct V.PGHFGEKLaMTYGALFCETSaKDGS.NIVEAVLHLAREVKK............ 157
DSSP L.LHHHHHHHhHHHLLEEEELLlLLLL.LHHHHHHHHHHHHLL............
No 22: 2FH5B MOLECULE: SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | || || |
Sbjct ......................................rAVLFVGLCDSGKTLLFVRLLT 22
DSSP ......................................lEEEEELLLLLLHHHHHHHHHH
DSSP elleelllllllLLLLEEEEELLL..LLEEEEEEHH........HHHHhlllllllhhhh
Query akpkiadyhfttLVPNLGXVETDD..GRSFVXADLP........GLIEgahqgvglghqf 230
ident | | ||| |
Sbjct ...gqyrdtqtsITDSSAIYKVNNnrGNSLTLIDLPgheslrfqLLDR............ 67
DSSP ...lllllllllLLLEEEEEELLLllLLEEEEEELLllhhhhhhHHHH............
DSSP hhHHHHLLEEEEEEELLLlllLLHHHHHHHHHHHHHH.LLLLllLLLLLLEEELLLLLLH
Query lrHIERTRVIVHVIDXSGlegRDPYDDYLTINQELSE.YNLRltERPQIIVANKXDXPEA 289
ident | | | | | | || | |
Sbjct ..FKSSARAVVFVVDSAA..fQREVKDVAEFLYQVLIdSMALknSPSLLIACNKQDIAMA 123
DSSP ..HHHHEEEEEEEEELLL..hHHHHHHHHHHHHHHHHhHHLLllLLEEEEEEELLLLLLL
DSSP HhHHHHHHHHLL............................lLLLLLLLLlLLLLLLHHHH
Query AeNLEAFKEKLT............................dDYPVFPISaVTREGLRELL 321
ident | | |
Sbjct K.SAKLIQQQLEkelntlrvtrspaqlgkkgkefefsqlplKVEFLECS.AKSADIQDLE 181
DSSP L.LHHHHHHHHHhhhhhhhhhllllllllllllllhhhlllLEEEEELL.LLLLLLHHHH
DSSP HHHHHHHllllllllllllll
Query FEVANQLentpefplydeeel 342
ident |
Sbjct KWLAKIA.............. 188
DSSP HHHHHHL..............
No 23: 1XB2A MOLECULE: ELONGATION FACTOR TU, MITOCHONDRIAL;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident || | || ||
Sbjct ....................................phvNVGTIGHVDHGKTTLTAAITK 24
DSSP ....................................leeEEEEELLHHHLHHHHHHHHHH
DSSP elleelllllllllllEEEEELlLLLEEEEEEHH..hHHHHLllllllhhhHHHHHhHLL
Query akpkiadyhfttlvpnLGXVETdDGRSFVXADLP..gLIEGAhqgvglghqFLRHIeRTR 238
ident | | | |
Sbjct ............ilaeHVEYST.AARHYAHTDCPghaDYVKN........xITGTA.PLD 62
DSSP ............hlllLEEEEL.LLLEEEEELLLlhhHHHHH........hHHLLL.LLL
DSSP EEEEEEELLlllllLHHH.HHHHHHHHHHhlLLLLllLLLLLEEELLLLLLhHHHHHHHH
Query VIVHVIDXSglegrDPYD.DYLTINQELSeyNLRLteRPQIIVANKXDXPEaAENLEAFK 297
ident | | || | | |
Sbjct GCILVVAAN.....DGPXpQTREHLLLAR..QIGV..EHVVVYVNKADAVQdSEXVELVE 113
DSSP EEEEEEELL.....LLLLlLHHHHHHHHH..HLLL..LLEEEEEELLLLLLlHHHHHHHH
DSSP HH.LLLL.........LLLLLLL.LLLL.........LLLHHHHHHHHHHHlLLLL....
Query EK.LTDD.........YPVFPIS.AVTR.........EGLRELLFEVANQLeNTPE.... 333
ident | | || | |
Sbjct LEiRELLtefgykgeeTPIIVGSaLCALeqrdpelglKSVQKLLDAVDTYI.PVPTrdle 172
DSSP HHhHHHHhhlllllllLLEEEELhHHHHllllllllhHHHHHHHHHHHHHL.LLLLllll
DSSP ............................................................
Query ............................................................ 333
ident
Sbjct kpfllpvesvysipgrgtvvtgtlergilkkgdeceflghsknirtvvtgiexfhksldr 232
DSSP llleeelleeeeellleeeeeeelllleeellleeeeellllleeeeeeeeeelleeele
DSSP ............................................................
Query ............................................................ 333
ident
Sbjct aeagdnlgalvrglkredlrrglvxakpgsiqphqkveaqvyiltkeeggrhkpfvshfx 292
DSSP eellleeeeeellllhhhllllleeellllllleeeeeeeeeellhhhllllllllllll
DSSP ........................................................llll
Query ........................................................fply 337
ident
Sbjct pvxfsltwdxacriilppgkelaxpgedlkltlilrqpxilekgqrftlrdgnrtigtgl 352
DSSP leeeelleeeeeeeelllllllllllleeeeeeeeeeeelllllleeeeelllleeeeee
DSSP LLLLL............
Query DEEEL............ 342
ident
Sbjct VTDTPaxteedknikws 369
DSSP EEELLlllhhhhlllll
No 24: 2H18A MOLECULE: ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8A;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellLLLLllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeGLRTlxdfry 60
ident
Sbjct ...................................lvprgsldwfkalfwKEEM...... 19
DSSP ...................................llllllhhhhhhhhhLLLE......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 19
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLE.
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVS. 179
ident ||| || | |
Sbjct .......................................ELTLVGLQYSGKTTFVNVIAs 40
DSSP .......................................EEEEEELLLLLHHHHHHHHLl
DSSP ..EELLeelllllllLLLLEEEEElllllEEEEEEHH...hhhHHLLlllllhhhhhhHH
Query ..SAKPkiadyhfttLVPNLGXVEtddgrSFVXADLP...gliEGAHqgvglghqflrHI 234
ident
Sbjct gqFNED........mINMRKITKG.....NVTIKLWDiggqprFRSM........werYC 79
DSSP llLEEE........eLLLEEEEEL.....LEEEEEEEllllhhHHHH........hhhHL
DSSP HHLLEEEEEEELLLllLLLHhHHHHHHHHHHHHLLLLlLLLLLLLEEELLLLLLHhhHHH
Query ERTRVIVHVIDXSGleGRDPyDDYLTINQELSEYNLRlTERPQIIVANKXDXPEAaeNLE 294
ident || | | | || | | |
Sbjct RGVSAIVYMVDAAD..QEKI.EASKNELHNLLDKPQL.QGIPVLVLGNKRDLPGA.lDEK 134
DSSP LLLLEEEEEEELLL..HHHH.HHHHHHHHHHHLLHHH.LLLLEEEEEELLLLLLL.lLHH
DSSP HHHHH..LLLL....LLLLLLLLLLllLLHHHHHHHHHHHllllllllllllll
Query AFKEK..LTDD....YPVFPISAVTreGLRELLFEVANQLentpefplydeeel 342
ident || | || |
Sbjct ELIEKmnLSAIqdreICCYSISCKEkdNIDITLQWLIQHS.............. 174
DSSP HHHHHllHHHLllllEEEEELLLLLllLHHHHHHHHHHLL..............
No 25: 2J0VA MOLECULE: RAC-LIKE GTP-BINDING PROTEIN ARAC7;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeEEELLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvFEVDEGLRtlxdfry 60
ident
Sbjct .............................................SHMSVSKF....... 8
DSSP .............................................LLLLLLLE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 8
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident || ||| | |
Sbjct ......................................iKCVTVGDGAVGKTCMLICYTS 30
DSSP ......................................eEEEEEELLLLLHHHHHHHHHH
DSSP elleellllllllllLEEEeELLL...LLEEEEEEHHhhhhhlllllllhhhhhhHHHHL
Query akpkiadyhfttlvpNLGXvETDD...GRSFVXADLPgliegahqgvglghqflrHIERT 237
ident |
Sbjct ...nkfptdyiptvfDNFSaNVAVdgqIVNLGLWDTA.........gqedysrplSYRGA 78
DSSP ...llllllllllllLLEEeEEELlllEEEEEEELLL.........llllllllhHHLLL
DSSP LEEEEEEELLLlllLLHHHHHH.HHHHHHHHlllLLLLLLLLLEEELL.LLLL.......
Query RVIVHVIDXSGlegRDPYDDYL.TINQELSEynlRLTERPQIIVANKX.DXPE....... 288
ident | | | || | | |
Sbjct DIFVLAFSLIS...KASYENVLkKWMPELRR...FAPNVPIVLVGTKLdLRDDkgyladh 132
DSSP LEEEEEEELLL...HHHHHHHHhLHHHHHHH...HLLLLLEEEEEELHhHHLLhhhhhll
DSSP .hHHHHHHHHHH.LLLLL.LLLLLLLLLLLLLHHHHHHHHHHHLLllllllllllll
Query .aAENLEAFKEK.LTDDY.PVFPISAVTREGLRELLFEVANQLENtpefplydeeel 342
ident | | |
Sbjct tnVITSTQGEELrKQIGAaAYIECSSKTQQNVKAVFDTAIKVVLQ...........p 178
DSSP llLLLHHHHHHHhHHHLLlEEEELLLLLLLLHHHHHHHHHHHHHL...........l
No 26: 2CXXA MOLECULE: PROBABLE GTP-BINDING PROTEIN ENGB;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeellllllllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdeglrtlxdfry 60
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 0
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | ||||||
Sbjct ......................................aTIIFAGRSNVGKSTLIYRLTG 22
DSSP ......................................lEEEEEELLLLLHHHHHHHHHL
DSSP E...llEELLlllllLLLLEEEEElllllEEEEEEHH.................hhHHHL
Query A...kpKIADyhfttLVPNLGXVEtddgrSFVXADLP.................glIEGA 220
ident | | | |
Sbjct KkvrrgKRPG...vtRKIIEIEWK.....NHKIIDXPgfgfxxglpkevqerikdeIVHF 74
DSSP LlllllLLLL...llLLLEEEEEL.....LEEEEELLlllllllllhhhhhhhhhhHHHH
DSSP llllllhhhhHHHHHHLLEEEEEEELLLlLLLL.......hhhHHHHHHHHHHHlllllL
Query hqgvglghqfLRHIERTRVIVHVIDXSGlEGRD.......pydDYLTINQELSEynlrlT 273
ident | | | | | | |
Sbjct .........iEDNAKNIDVAVLVVDGKAaPEIIkrwekrgeipIDVEFYQFLRE.....L 120
DSSP .........hHHHHHHLLEEEEEEELLHhHHHHhhhhhlllllHHHHHHHHHHH.....L
DSSP LLLLLLEEELLL.LLLHHHHHHHHHHHLLL.....lLLLLLLLLLLLLLLHHHHHHHHHH
Query ERPQIIVANKXD.XPEAAENLEAFKEKLTD.....dYPVFPISAVTREGLRELLFEVANQ 327
ident | | || | | || |||| |
Sbjct DIPTIVAVNKLDkIKNVQEVINFLAEKFEVplseidKVFIPISAKFGDNIERLKNRIFEV 180
DSSP LLLEEEEEELHHhLLLHHHHHHHHHHHHLLlhhhhhHHEEELLLLLLLLHHHHHHHHHHH
DSSP HLLLlllllllllll
Query LENTpefplydeeel 342
ident
Sbjct IRER........... 184
DSSP HHHL...........
No 27: 1GOTA MOLECULE: GT-ALPHA/GI-ALPHA CHIMERA;
DSSP leeeeeeeeEELLllllllllllllllllllllllllllllLLEE...EEEL...LLLLl
Query xfvdqvkvyVKGGdggngxvafrrekyvpkggpaggdggkgGDVV...FEVD...EGLRt 54
ident |
Sbjct .......saEEKH............................SRELekkLKEDaekDART. 24
DSSP .......lhHHHH............................HHHHhhhHHHHhhhHHLE.
DSSP llhhhllleeellllllllllllllllllleeeeellleeeeellllleeeeelllllee
Query lxdfrykkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqra 114
ident
Sbjct ............................................................ 24
DSSP ............................................................
DSSP eeellllllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHH
Query viarggrggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTL 174
ident | | ||||
Sbjct ............................................vKLLLLGAGESGKSTI 40
DSSP ............................................eEEEEEELLLLLHHHH
DSSP HHHL..EEEL..................................................
Query LSVV..SSAK.................................................. 182
ident
Sbjct VKQXkiIHQDgysleeclefiaiiygntlqsilaivraxttlniqygdsarqddarklxh 100
DSSP HHHHhhHHLLlllhhhhhhlhhhhhhhhhhhhhhhhhhhhhllllllllhhhhhhhhhhh
DSSP ............................................................
Query ............................................................ 182
ident
Sbjct xadtieegtxpkexsdiiqrlwkdsgiqacfdraseyqlndsagyylsdlerlvtpgyvp 160
DSSP hhlllllllllhhhhhhhhhhhhlhhhhhhhhlhhhllllllhhhhhllhhhhhllllll
DSSP ..leelllllllLLLLEEEEELlLLLEEEEEEHH.hhhHHLLlllllhhhHHHHHHHLLE
Query ..pkiadyhfttLVPNLGXVETdDGRSFVXADLP.gliEGAHqgvglghqFLRHIERTRV 239
ident | | | | |
Sbjct teqdvlrsrvktTGIIETQFSF.KDLNFRXFDVGgqrsERKK........WIHCFEGVTA 211
DSSP lhhhhhllllllLEEEEEEEEE.LLEEEEEEEEEelllLHHH........LHHHHLLLLE
DSSP EEEEEELLLLLL........LLHHHHHHHHHHHHHhLLLLlLLLLLLLEEELLL..LLLH
Query IVHVIDXSGLEG........RDPYDDYLTINQELSeYNLRlTERPQIIVANKXD..XPEA 289
ident | | | | || |
Sbjct IIFCVALSDYDLvlaedeexNRXHESXKLFDSICN.NKWF.TDTSIILFLNKKDlfEEKI 269
DSSP EEEEEEHHHHHLllllllllLHHHHHHHHHHHHHL.LHHH.LLLEEEEEEELHHhhHHHL
DSSP ..................hHHHHHHHHHLLL........LLLLLLLLlLLLLLLHHHHHH
Query ..................aENLEAFKEKLTD........DYPVFPISaVTREGLRELLFE 323
ident | |
Sbjct kksplticypeyagsntyeEAGNYIKVQFLElnxrrdvkEIYSHXTCaTDTQNVKFVFDA 329
DSSP llllhhhllllllllllhhHHHHHHHHHHHLllllllllLLEEEELLlLLHHHHHHHHHH
DSSP HHHHHLLLLllllllllll
Query VANQLENTPefplydeeel 342
ident |
Sbjct VTDIIIKEN.......... 338
DSSP HHHHHHLLL..........
No 28: 2BMJA MOLECULE: CENTAURIN GAMMA 1;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeELLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfeVDEGLRtlxdfry 60
ident
Sbjct ...............................................MRSIPE....... 6
DSSP ...............................................LLLLLE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 6
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | | ||| |
Sbjct ......................................lRLGVLGDARSGKSSLIHRFLT 28
DSSP ......................................eEEEEELLLLLLHHHHHHHHHH
DSSP elleellllllllLLLEEEEELLL...LLEEEEEEHHhhhhhlllllllhhhhhHHHHHL
Query akpkiadyhfttlVPNLGXVETDD...GRSFVXADLPgliegahqgvglghqflRHIERT 237
ident |
Sbjct ....gsyqvlektESEQYKKEMLVdgqTHLVLIREEA............gapdaKFSGWA 72
DSSP ....lllllllllLLEEEEEEEEElleEEEEEEEELL............llllhHHHHHL
DSSP LEEEEEEELLLlllLLHHHHHHHHHHHHHHLLLLllLLLLLLEEELLLL...LLHHhHHH
Query RVIVHVIDXSGlegRDPYDDYLTINQELSEYNLRltERPQIIVANKXDX...PEAAeNLE 294
ident | || | |
Sbjct DAVIFVFSLED...ENSFQAVSRLHGQLSSLRGR.gGLALALVGTQDRIsasSPRVvGDA 128
DSSP LEEEEEEELLL...HHHHHHHHHHHHHHHHHLLL.lLLEEEEEEELLLLlllLLLLlLHH
DSSP HHHHH.LLLL.LLLLLLLlLLLLL.LHHHHHHHHHHHLLLLllllllllll
Query AFKEK.LTDD.YPVFPISaVTREG.LRELLFEVANQLENTPefplydeeel 342
ident | |||
Sbjct RARALcADMKrCSYYETC.ATYGLnVDRVFQEVAQKVVTLR....kqqqll 174
DSSP HHHHHhHLLLlEEEEEEL.LLLLLlHHHHHHHHHHHHHHHH....hhhhhl
No 29: 2B7BA MOLECULE: ELONGATION FACTOR 1-ALPHA;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeeLLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevDEGLRtlxdfry 60
ident |
Sbjct ...............................................gKEKSH....... 6
DSSP ...............................................lLLLEE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 6
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLE.
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVS. 179
ident | | ||||
Sbjct ......................................iNVVVIGHVDSGKSTTTGHLIy 28
DSSP ......................................eEEEEEELLLLLHHHHHHHHHh
DSSP .EELLE..............................elLLLLlllLLLEeEEELlLLLEE
Query .SAKPK..............................iaDYHFttlVPNLgXVETdDGRSF 208
ident ||
Sbjct kCGGIDkrtiekfekeaaelgkgsfkyawvldklkaerERGItidIALW.KFET.PKYQV 86
DSSP hHLLLLhhhhhhhhhhhhhhllllllhhhhhhhhhhhhHHLLlllLLLE.EEEL.LLEEE
DSSP EEEEHH..hhHHHLllllllhhhHHHHhhHLLEEEEEEELLlllLLLHHHHHH...HHHH
Query VXADLP..glIEGAhqgvglghqFLRHieRTRVIVHVIDXSgleGRDPYDDYL...TINQ 263
ident | | |
Sbjct TVIDAPghrdFIKN.......miTGTS..QADCAILIIAGG...VGEFEAGISkdgQTRE 134
DSSP EEEELLllllHHHH.......hhHLLL..LLLEEEEEEELL...HHHHHHHLLlllHHHH
DSSP HHHhlllLLLL...LLLLLEEELLLLLLHH.HHHHHHHHHLL..........LLLLLLLL
Query ELSeynlRLTE...RPQIIVANKXDXPEAA.ENLEAFKEKLT..........DDYPVFPI 309
ident | | || | | ||
Sbjct HAL....LAFTlgvRQLIVAVNKMDSVKWDeSRFQEIVKETSnfikkvgynpKTVPFVPI 190
DSSP HHH....HHHHlllLEEEEEEELLLLLLLLhHHHHHHHHHHHhhhhhhlllhHHLLEEEL
DSSP LLLLLLLLH........................HHHHHHHHHhLLLL.............
Query SAVTREGLR........................ELLFEVANQlENTP............. 332
ident | || |
Sbjct SGWNGDNMIeattnapwykgweketkagvvkgkTLLEAIDAI.EQPSrptdkplrlplqd 249
DSSP LLLLLLLLLllllllllllleeeeelleeeeelLHHHHHHLL.LLLLlllllllleeeee
DSSP ............................................................
Query ............................................................ 332
ident
Sbjct vykiggigtvpvgrvetgvikpgmvvtfapagvttevksvemhheqleqgvpgdnvgfnv 309
DSSP eeeellleeeeeeelllllllllleeeeellleeeelleeeelleelllllllleeeeel
DSSP ............................................................
Query ............................................................ 332
ident
Sbjct knvsvkeirrgnvcgdakndppkgcasfnatvivlnhpgqisagyspvldchtahiacrf 369
DSSP lllllllllllleeeelllllllllleeeeeeeellllllllllllleeeelleeeeeee
DSSP ............................................llLLLL..........
Query ............................................efPLYD.......... 338
ident |
Sbjct dellekndrrsgkkledhpkflksgdaalvkfvpskpmcveafseyPPLGrfavrdmrqt 429
DSSP eeeeeeelllllleeeellllllllleeeeeeeellllllllllllHHHLeeeeeellee
DSSP .....LLLL..
Query .....EEEL.. 342
ident
Sbjct vavgvIKSVdk 440
DSSP eeeeeEEEEel
No 30: 1EGAA MOLECULE: PROTEIN (GTP-BINDING PROTEIN ERA);
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeeLLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevDEGLRtlxdfry 60
ident |
Sbjct ................................................DKSYC....... 5
DSSP ................................................LLLEE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 5
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident || | |||||||
Sbjct ......................................gFIAIVGRPNVGKSTLLNKLLG 27
DSSP ......................................eEEEEELLLLLLHHHHHHHHHL
DSSP ElleelllllLLLL..LLEEEEElllLLEEEEEEHhhhhhhlllllllhHHHHH......
Query AkpkiadyhfTTLV..PNLGXVEtddGRSFVXADLpgliegahqgvglgHQFLR...... 232
ident | | |
Sbjct Q.kisitsrkAQTTrhRIVGIHT.egAYQAIYVDT..........pglhMEEKRainrlm 75
DSSP L.leeellllLLLLllLEEEEEE.elLEEEEEELL..........llllHHHHHhhhhhh
DSSP ......hhHHLLEEEEEEELLLlllllhhHHHHHHHHHHHhlllllLLLLLLLEEELLLL
Query ......hiERTRVIVHVIDXSGlegrdpyDDYLTINQELSeynlrlTERPQIIVANKXDX 286
ident | | | | | || |
Sbjct nkaasssiGDVELVIFVVEGTR.....wtPDDEMVLNKLR.....eGKAPVILAVNKVDN 125
DSSP llllllllLLEEEEEEEEELLL.....llHHHHHHHHHHH.....lLLLLEEEEEELLLL
DSSP L....LHHHHHHHHHhHLLLlLLLLLLlLLLLLL.LHHHHHHHHHHHL............
Query P....EAAENLEAFKeKLTDdYPVFPIsAVTREG.LRELLFEVANQLE............ 329
ident | || | |
Sbjct VqekaDLLPHLQFLA.SQMNfLDIVPI.SAETGLnVDTIAAIVRKHLPeathhfpedyit 183
DSSP LllhhHHHHHHHHHH.LLLLlLEEEEL.LLLLLLlHHHHHHHHHLLLLllllllllllll
DSSP ............................................................
Query ............................................................ 329
ident
Sbjct drsqrfmaseiireklmrflgaelpysvtveierfvsnerggydinglilveregqkkmv 243
DSSP lllhhhhhhhhhhhhhhhhhhhhlllleeeeeeeeelllllleeeeeeeeellhhhhhhh
DSSP ....................................lllllllllllll
Query ....................................ntpefplydeeel 342
ident
Sbjct ignkgakiktigiearkdmqemfeapvhlelwvkvksgwadderalrsl 292
DSSP hlhhhhhhhhhhhhhhhhhhhhlllleeeeeeeeelllllhhhhhhlll
No 31: 1AZSC MOLECULE: VC1;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeeLLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevDEGLRtlxdfry 60
ident
Sbjct ................................................VYRAT....... 5
DSSP ................................................LLLLE.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 5
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | | ||||
Sbjct ......................................hRLLLLGAGESGKSTIVKQMRI 27
DSSP ......................................eEEEEEELLLLLHHHHHHHHHH
DSSP ............................................................
Query ............................................................ 180
ident
Sbjct lhvngekatkvqdiknnlkeaietivaamsnlvppvelanpenqfrvdyilsvmnvpdfd 87
DSSP hhllllllhhhhhhhhhhhhhhhhhhhhhhhlllllllllhhhhhhhhhhhhllllllll
DSSP ...................................................elleellll
Query ...................................................akpkiadyh 189
ident
Sbjct fppefyehakalwedegvracyersneyqlidcaqyfldkidvikqddyvpsdqdllrcr 147
DSSP llhhhhhhhhhhhhlhhhhhhhllhhhllllllhhhhhllhhhhllllllllhhhhhhll
DSSP lllLLLLEEEEELlLLLEEEEEEH.......hHHHHhlllllllhhhhhhHHHHLLEEEE
Query fttLVPNLGXVETdDGRSFVXADL.......pGLIEgahqgvglghqflrHIERTRVIVH 242
ident | | | | |
Sbjct vltSGIFETKFQV.DKVNFHMFDVggqrderrKWIQ..............CFNDVTAIIF 192
DSSP lllLLEEEEEEEE.LLEEEEEEEElllhhhhhHHHH..............HLLLLLEEEE
DSSP EEELLLLLLL.......LHHHHHHHHHHHHHHLLLLlLLLLLLLEEELLLLLL.......
Query VIDXSGLEGR.......DPYDDYLTINQELSEYNLRlTERPQIIVANKXDXPE....... 288
ident | | | | || |
Sbjct VVASSSYNMVirednqtNRLQEALNLFKSIWNNRWL.RTISVILFLNKQDLLAekvlagk 251
DSSP EEELLHHHLLlllllllLHHHHHHHHHHHHHLLLLL.LLLLEEEEEELHHHHHhhhhhll
DSSP ............................hhHHHHHHHHH.LLLL.........LLLLLLL
Query ............................aaENLEAFKEK.LTDD.........YPVFPIS 310
ident |
Sbjct skiedyfpefaryttpedatpepgedprvtRAKYFIRDEfLRIStasgdgrhyCYPHFTC 311
DSSP llhhhllhhhhlllllllllllllllhhhhHHHHHHHHHhHHHHhllllllllEEEEELL
DSSP LLLLLLLHHHHHHHHHHHLLLLllllllllll
Query AVTREGLRELLFEVANQLENTPefplydeeel 342
ident || | |
Sbjct AVDTENIRRVFNDCRDIIQRMH....lrqyel 339
DSSP LLLHHHHHHHHHHHHHHHHHHH....hhhhhl
No 32: 2GF0A MOLECULE: GTP-BINDING PROTEIN DI-RAS1;
DSSP leeeeeeeeeelllllllllllllllllllllllllllllllleeeeelLLLLlllhhhl
Query xfvdqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdvvfevdEGLRtlxdfry 60
ident
Sbjct .................................................QSND....... 4
DSSP .................................................LLLL.......
DSSP lleeellllllllllllllllllleeeeellleeeeellllleeeeellllleeeeelll
Query kkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqviadltehgqraviargg 120
ident
Sbjct ............................................................ 4
DSSP ............................................................
DSSP lllllhhhllllllllllllllllllleeeeeeeeelllLEEEELLLLLLHHHHHHHLEE
Query rggrgnsrfatpanpapqlsengepgkeryivlelkvlaDVGLVGFPSVGKSTLLSVVSS 180
ident | | |||| |
Sbjct ......................................yRVVVFGAGGVGKSSLVLRFVK 26
DSSP ......................................eEEEEEELLLLLHHHHHHHHHH
DSSP elleellllllllLLLEEEEE...lllLLEEEEEEHH.hhHHHLllllllhhhhhHHHHH
Query akpkiadyhfttlVPNLGXVE...tddGRSFVXADLP.glIEGAhqgvglghqflRHIER 236
ident | | |
Sbjct ...gtfrdtyiptIEDTYRQViscdksVCTLQITDTTgshQFPA........mqrLSISK 75
DSSP ...llllllllllLLEEEEEEeeelleEEEEEEEELLhhhLLHH........hhhHHHHH
DSSP LLEEEEEEELLLlllLLHHHHHHHHHHHHHHlLLLLL.LLLLLLEEELLLLLLHhhHHHH
Query TRVIVHVIDXSGlegRDPYDDYLTINQELSEyNLRLT.ERPQIIVANKXDXPEAaeNLEA 295
ident | | | | || |
Sbjct GHAFILVFSVTS...KQSLEELGPIYKLIVQ.IKGSVeDIPVMLVGNKCDETQRevDTRE 131
DSSP LLEEEEEEELLL...HHHHHLLHHHHHHHHH.HHLLHhHLLEEEEEELLLLLLLllLHHH
DSSP HHHH.LLLLLLLLLLLLLLLlLLHHHHHHHHHHHlLLLLlllllllll
Query FKEK.LTDDYPVFPISAVTReGLRELLFEVANQLeNTPEfplydeeel 342
ident || || |
Sbjct AQAVaQEWKCAFMETSAKMNyNVKELFQELLTLE.TRRN.....msln 173
DSSP HHHHhHHHLLEEEELLLLLLlLHHHHHHHHHHHL.LLLL.....eell
No 33: 1SULA MOLECULE: GTP-BINDING PROTEIN YSXC;
DSSP ................LEEEeeeeeeelllllllllllllllllllllllllllllllle
Query ................XFVDqvkvyvkggdggngxvafrrekyvpkggpaggdggkggdv 44
ident
Sbjct mkvtkseivisavkpeQYPE........................................ 20
DSSP llllleeeeeeellhhHLLL........................................
DSSP eeeellllllllhhhllleeellllllllllllllllllleeeeellleeeeelllllee
Query vfevdeglrtlxdfrykkhfkairgehgxsknqhgrnaddxvikvppgtvvtdddtkqvi 104
ident
Sbjct ............................................................ 20
DSSP ............................................................
DSSP eeellllleeeeellllllllhhhllllllllllllllllllleeeeeeeeELLLLEEEE
Query adltehgqraviarggrggrgnsrfatpanpapqlsengepgkeryivlelKVLADVGLV 164
ident | |
Sbjct ...................................................GGLPEIALA 29
DSSP ...................................................LLLLEEEEE
DSSP LLLLLLHHHHHHHLEeelleelllllllLLLLEEEEElllllEEEEEEHH..........
Query GFPSVGKSTLLSVVSsakpkiadyhfttLVPNLGXVEtddgrSFVXADLP.......... 214
ident | |||| | | |
Sbjct GRSNVGKSSFINSLI.......nrknlaQTLNFYIIN....dELHFVDVPgygfakvsks 78
DSSP ELLHHHHHHHHHHHL.......llllllLLEEEEEEL....lLEEEEELLllllllllhh
DSSP ....hhhHHLLlllllhhhHHHHhHHLLEEEEEEELLLllllLHHHHHHHHHHHHHHlll
Query ....gliEGAHqgvglghqFLRHiERTRVIVHVIDXSGlegrDPYDDYLTINQELSEynl 270
ident | | | | | |
Sbjct ereawgrMIET.......yITTR.EELKAVVQIVDLRH....APSNDDVQMYEFLKY... 123
DSSP hhhhhhhHHHH.......hHHHL.LLEEEEEEEEELLL....LLLHHHHHHHHHHHH...
DSSP llLLLLLLLEEELLLLL...LHHHHHHHHHHH.LLLL.LLLLLLLlLLLL.LLHHHHHHH
Query rlTERPQIIVANKXDXP...EAAENLEAFKEK.LTDD.YPVFPISaVTRE.GLRELLFEV 324
ident | | | | | | | | |
Sbjct ..YGIPVIVIATKADKIpkgKWDKHAKVVRQTlNIDPeDELILFS.SETKkGKDEAWGAI 180
DSSP ..LLLLEEEEEELHHHLlhhHHHHHHHHHHHHhLLLLlLEEEELL.LLLLlLHHHHHHHH
DSSP HHHHLLllllllllllll
Query ANQLENtpefplydeeel 342
ident
Sbjct KKMINR............ 186
DSSP HHHHLL............
No 34: 1R5BA MOLECULE: EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP-
DSSP leeeeeEEEEellllllllllllllllllllllllllllllllEEEE..ELLLLLlllhh
Query xfvdqvKVYVkggdggngxvafrrekyvpkggpaggdggkggdVVFE..VDEGLRtlxdf 58
ident |
Sbjct tedatdLQNE................................vDQELlkDMYGKE..... 23
DSSP llllllLLLL................................lL