DaliLite: Structural Neighbours

Query: 1JYHA MOLECULE: DNA GYRASE INHIBITORY PROTEIN;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.

Summary

Notation:
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1JYH-A 30.9  0.0  155   155  100   DNA GYRASE INHIBITORY PROTEIN;                             "         
   2:  1EXI-A 12.6  3.4  142   275   13   MULTIDRUG-EFFLUX TRANSPORTER REGULATOR;                    "         
   3:  2GOV-A 11.8  3.3  145   184   10   HEME-BINDING PROTEIN 1;                                    "         
   4:  1D5Y-A 11.7  2.6  135   288   10   ROB TRANSCRIPTION FACTOR;                                  "         
   5:  1X60-A  3.8  3.7   68    79    4   SPORULATION-SPECIFIC N-ACETYLMURAMOYL-L-ALANINE            "         
   6:  2J5A-A  3.7  3.1   63   106   14   30S RIBOSOMAL PROTEIN S6;                                  "         
   7:  2BUJ-A  3.7  3.8   58   291    3   SERINE/THREONINE-PROTEIN KINASE 16;                        "         
   8:  2B7B-B  3.7  2.9   62    90    3   ELONGATION FACTOR 1-ALPHA;                                 "         
   9:  1XRS-B  3.7  2.3   46   212    9   D-LYSINE 5,6-AMINOMUTASE ALPHA SUBUNIT;                    "         
  10:  1VBK-A  3.7  5.8   75   307    9   HYPOTHETICAL PROTEIN PH1313;                               "         
  11:  1Y7P-A  3.6  4.4   75   212    5   HYPOTHETICAL PROTEIN AF1403;                               "         
  12:  2NXC-A  3.5  3.2   67   249    7   RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE;                   "         
  13:  1U0S-A  3.5  3.7   60    86   10   CHEMOTAXIS PROTEIN CHEY;                                   "         
  14:  2OD4-A  3.4  3.7   69   101    7   HYPOTHETICAL PROTEIN;                                      "         
  15:  2DPI-A  3.4  7.0   57   372    5   DNA POLYMERASE IOTA;                                       "         
  16:  1O5J-A  3.4  4.6   70   104    7   PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN;             "         
  17:  1ZPV-A  3.3  3.5   58    85   10   ACT DOMAIN PROTEIN;                                        "         
  18:  2OAU-A  3.2  7.5   61   254    8   SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL;                "         
  19:  2DCL-A  3.2  3.6   64    99   11   HYPOTHETICAL UPF0166 PROTEIN PH1503;                       "         
  20:  1TZ0-A  3.2  4.9   78   108    3   HYPOTHETICAL PROTEIN;                                      "         
  21:  1O51-A  3.2  3.8   63    89    5   HYPOTHETICAL PROTEIN TM0021;                               "         
  22:  1JMT-A  3.2  3.3   70    98   10   SPLICING FACTOR U2AF 35 KDA SUBUNIT;                       "         
  23:  2UUU-A  3.0  5.1  107   550    9   ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE;                   "         
  24:  2GIF-A  3.0  4.0  101  1032    6   ACRIFLAVINE RESISTANCE PROTEIN B;                          "         
  25:  2FRP-A  3.0  4.2   59   280    3   MAJOR CAPSID PROTEIN;                                      "         
  26:  2F1F-A  3.0  5.2   74   163    5   ACETOLACTATE SYNTHASE ISOZYME III SMALL SUBUNIT;           "         
  27:  2EWH-A  3.0  3.2   57    92    4   MAJOR CARBOXYSOME SHELL PROTEIN 1A;                        "         
  28:  1IUJ-A  3.0  4.3   72   102   13   HYPOTHETICAL PROTEIN TT1380;                               "         
  29:  2PEB-A  2.9  4.6   73   115    7   PUTATIVE DIOXYGENASE;                                      "         
  30:  2E29-A  2.9  4.3   69    92    7   ATP-DEPENDENT RNA HELICASE DDX50;                          "         
  31:  1Z1Z-A  2.9  5.7   64   129    8   MINOR TAIL PROTEIN U;                                      "         
  32:  2JOQ-A  2.8  3.4   56    91    7   HYPOTHETICAL PROTEIN HP_0495;                              "         
  33:  2FY1-A  2.8  5.6   74   108   11   RNA-BINDING MOTIF PROTEIN, Y CHROMOSOME, FAMILY            "         
  34:  2DIT-A  2.8  3.5   76   112    9   HIV TAT SPECIFIC FACTOR 1 VARIANT;                         "         
  35:  1XHO-A  2.8  3.6   60   112    5   CHORISMATE MUTASE;                                         "         
  36:  2BX6-A  2.7  4.4   74   311    5   XRP2 PROTEIN;                                              "         
  37:  2BTU-A  2.7  3.8   76   321   11   PHOSPHORIBOSYL-AMINOIMIDAZOLE SYNTHETASE;                  "         
  38:  2QEC-A  2.6  4.9   51   181   10   HISTONE ACETYLTRANSFERASE HPA2 AND RELATED                 "         
  39:  2FKL-A  2.6  3.4   50    64    4   AMYLOID BETA A4 PROTEIN PRECURSOR;                         "         
  40:  2EWC-A  2.6  4.2   56   120    7   CONSERVED HYPOTHETICAL PROTEIN;                            "         
  41:  1M55-A  2.6  4.4   79   193    6   REP PROTEIN;                                               "         
  42:  2PFD-A  2.5  3.2   66   540    5   FORMIMIDOYLTRANSFERASE-CYCLODEAMINASE;                     "         
  43:  2OD6-A  2.5  3.5   65   110   12   HYPOTHETICAL PROTEIN;                                      "         
  44:  2CZ8-A  2.5  5.8   56    67    7   TT0972 PROTEIN;                                            "         
  45:  2A0F-B  2.4  2.9   53   146    6   ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN;            "         
  46:  1P2Z-A  2.4  3.7   59   887    7   HEXON PROTEIN;                                             "         
  47:  1J5U-A  2.4  6.6   63   127   10   ARCHEASE, POSSIBLE CHAPERONE;                              "         
  48:  2NRK-A  2.3  4.2   75   165   12   HYPOTHETICAL PROTEIN GRPB;                                 "         
  49:  2FB0-A  2.3  4.2   66    94    8   CONSERVED HYPOTHETICAL PROTEIN;                            "         
  50:  2A0I-A  2.3  3.6   78   293   12   TRAI PROTEIN;                                              "         
  51:  1YWQ-A  2.3  4.5   77   199    5   NITROREDUCTASE FAMILY PROTEIN;                             "         
  52:  1TEL-A  2.3  4.5   63   424   10   RIBULOSE BISPHOSPHATE CARBOXYLASE, LARGE SUBUNIT;          "         
  53:  1IVZ-A  2.3  6.8   80   131    6   HYPOTHETICAL PROTEIN 1110008I14RIK;                        "         
  54:  1CVJ-A  2.3  8.1   68   169    4   POLYDENYLATE BINDING PROTEIN 1;                            "         
  55:  3SXL-A  2.2  3.4   55   157    7   PROTEIN (SEX-LETHAL);                                      "         
  56:  2H39-A  2.2  5.0   97   308    8   PROBABLE GALACTOSE-1-PHOSPHATE URIDYL                      "         
  57:  2DR5-A  2.2  3.5   82   437    6   CCA-ADDING ENZYME;                                         "         
  58:  2DJW-A  2.2  4.6   60    80   17   PROBABLE TRANSCRIPTIONAL REGULATOR, ASNC FAMILY;           "         
  59:  2DCT-A  2.2  2.5   45   105    7   HYPOTHETICAL PROTEIN TTHA0104;                             "         
  60:  1UW4-A  2.2  3.4   63    90   10   UPF3X;                                                     "         
  61:  1O0P-A  2.2  3.6   66   104    8   SPLICING FACTOR U2AF 65 KDA SUBUNIT;                       "         
  62:  2Q43-A  2.1  7.5   57   375   12   IAA-AMINO ACID HYDROLASE ILR1-LIKE 2;                      "         
  63:  2NLW-A  2.1  4.0   58   105   12   EUKARYOTIC TRANSLATION INITIATION FACTOR 3                 "         
  64:  2IFA-A  2.1  3.7   71   200    1   HYPOTHETICAL PROTEIN SMU.260;                              "         
  65:  2GHP-A  2.1  4.1   76   232    5   U4/U6 SNRNA-ASSOCIATED SPLICING FACTOR PRP24;              "         
  66:  2F06-A  2.1  5.4   68   144    9   CONSERVED HYPOTHETICAL PROTEIN;                            "         
  67:  1YLX-A  2.0  3.2   51   100    6   HYPOTHETICAL PROTEIN APC35702;                             "         
-

No 1: 1JYHA MOLECULE: DNA GYRASE INHIBITORY PROTEIN;

DSSP  LLLEEEEELLEEEEEEEEELLHHHHHHHHHHHHHHHHHHLLLLLLEEEEEELLLLLLLLH
Query MNYEIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVPKEWVAVYYDNPDETPA   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct MNYEIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVPKEWVAVYYDNPDETPA   60
DSSP  LLLEEEEELLEEEEEEEEELLHHHHHHHHHHHHHHHHHHLLLLLLEEEEEELLLLLLLLH


DSSP  HHLEEEEEEEELLLLLLLLLLLLLEEEEELLEEEEEEEEEELLLLLHHHHHHHHHHHLLL
Query EKLRCDTVVTVPGYFTLPENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQD  120
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct EKLRCDTVVTVPGYFTLPENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQD  120
DSSP  HHLEEEEEEEELLLLLLLLLLLLLEEEEELLEEEEEEEEEELLLLLHHHHHHHHHHHLLL


DSSP  LLEEELLLLEEEEELLLHHHHLLEEEEEEEEEEEL
Query SAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPK  155
ident |||||||||||||||||||||||||||||||||||
Sbjct SAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPK  155
DSSP  LLEEELLLLEEEEELLLHHHHLLEEEEEEEEEEEL


No 2: 1EXIA MOLECULE: MULTIDRUG-EFFLUX TRANSPORTER REGULATOR;

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct esyysigevsklanvsikalryydkidlfkpayvdpdtsyryytdsqlihldlikslkyi   60
DSSP  lleeehhhhhhhllllhhhhhhhhhllllllleelllllleeeellllhhhhhhhhhhhh


DSSP  ...........................................................L
Query ...........................................................M    1
ident                                                             
Sbjct gtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalG  120
DSSP  lllhhhhhhhhhlllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhlllllL


DSSP  LLEEEEELLEEEEEEEEELLH.HHHHHHHHHHHHHHHHHL.LLLLLEEEEEEL....lLL
Query NYEIKQEEKRTVAGFHLVGPW.EQTVKKGFEQLMMWVDSK.NIVPKEWVAVYY....dNP   55
ident       ||          |   |         |     |          |          
Sbjct EVFVLDEEEIRIIQTEAEGIGpENVLNASYSKLKKFIESAdGFTNNSYGATFSfqpytSI  180
DSSP  LEEEEELLLLLEEEEELLLLLlLLLLLLLLHHHHHHHHHHhLLLLLLEELLLLlllllLL


DSSP  LLLlhhhLEEEEEEEELlLLLLLLLLL.LLEEEEELLEEEEEEEEEELllLLHH.HHHHH
Query DETpaekLRCDTVVTVPgYFTLPENSE.GVILTEITGGQYAVAVARVVgdDFAK.PWYQF  113
ident ||             |                | |  | ||                   
Sbjct DEM....TYRHIFTPVL.TNKQISSITpDMEITTIPKGRYACIAYNFS.pEHYFlNLQKL  234
DSSP  LLL....LLLEEEEELL.LLLLLLLLLlLLEEELLLLLEEEEELEELL.hHHHHhHHHHH


DSSP  HHHHLLLLlEEELlLLEEEEELLlHHHH....LLEEEEEEEEEEel
Query FNSLLQDSaYEMLpKPCFEVYLNnGAED....GYWDIEMYVAVQpk  155
ident                   |                  ||       
Sbjct IKYIADRQ.LTVV.SDVYELIIP.IHYSpkkqEEYRVEMKIRIA..  275
DSSP  HHHHHHHL.LLLL.LLLLLEEEE.LLLLllllLLEEELLEEEEL..


No 3: 2GOVA MOLECULE: HEME-BINDING PROTEIN 1;

DSSP  ......................LLLEEEEELLEEEEEEEEE.LLHHHHHHHHHHHHHHHH
Query ......................MNYEIKQEEKRTVAGFHLV.GPWEQTVKKGFEQLMMWV   37
ident                         ||    |    |       |            |  |
Sbjct nslfgsvetwpwqvlstggkedVSYEERACEGGKFATVEVTdKPVDEALREAMPKIMKYV   60
DSSP  lllllllllllleeeeelllllLLEEEEELLLLEEEEEEEElLLHHHHHHHHHHHHHHHH


DSSP  HHL......LLLLLEEEEEELlLLLLLlhhHLEEEEEEEEL...LLLLLLlLLLLLEEEE
Query DSK......NIVPKEWVAVYYdNPDETpaeKLRCDTVVTVP...GYFTLPeNSEGVILTE   88
ident                                         |            | |   |
Sbjct GGTndkgvgMGMTVPVSFAVF.PNEDG.slQKKLKVWFRIPnqfQGSPPApSDESVKIEE  118
DSSP  HLLllllllLLLLLLEEEEEE.ELLLL.leEEEEEEEELLLhhhHHLLLLlLLLLLEEEE


DSSP  ELLEEEEEEEEEELllLLHHHHHHHHHHHLL.LLLEEELLL.LEEEEELLLHHhHLLE.E
Query ITGGQYAVAVARVVgdDFAKPWYQFFNSLLQ.DSAYEMLPK.PCFEVYLNNGAeDGYW.D  145
ident   |               |                                     |   
Sbjct REGITVYSTQFGGY.aKEADYVAHATQLRTTlEGTPATYQGdVYYCAGYDPPM.KPYGrR  176
DSSP  LLLLEEEEEEEELL.lLHHHHHHHHHHHHHHlLLLLLLEEEeEEEEEELLLLL.LLLLlE


DSSP  EEEEEEEEel
Query IEMYVAVQpk  155
ident  |        
Sbjct NEVWLVKA..  184
DSSP  EEEEEEEL..


No 4: 1D5YA MOLECULE: ROB TRANSCRIPTION FACTOR;

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct qagiirdlliwleghldqplsldnvaakagyskwhlqrmfkdvtghaigayirarrlsks   60
DSSP  lhhhhhhhhhhhhlllllllllhhhhllllllhhhhhhhhhhhhlllhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct avalrltarpildialqyrfdsqqtftrafkkqfaqtpalyrrspewsafgirpplrlge  120
DSSP  hhhhhhllllhhhhhhhlllllhhhhhhhhhhhhlllhhhhhhllleellllllllllll


DSSP  ...LLLEEEEELLEEEEEEEEELL.....hhhHHHHHHHHHHHHHHHLL.LLLLEEEEEE
Query ...MNYEIKQEEKRTVAGFHLVGP.....weqTVKKGFEQLMMWVDSKN.IVPKEWVAVY   51
ident            |     |                     |            |       
Sbjct ftmPEHKFVTLEDTPLIGVTQSYScsleqisdFRHEMRYQFWHDFLGNApTIPPVLYGLN  180
DSSP  lllLLEEEEEELLEEEEEEEEELLllhhhhhhHHHHHHHHHHHHHHHHLlLLLLLEEEEE


DSSP  LLL..lllllhhHLEEEEEEEELllllllllLLLLEEEEELLEEEEEEEEEELLLLLHHH
Query YDN..pdetpaeKLRCDTVVTVPgyftlpenSEGVILTEITGGQYAVAVARVVGDDFAKP  109
ident                  |                       || |        |      
Sbjct ETRpsqdkddeqEVFYTTALAQD...qadgyVLTGHPVMLQGGEYVMFTYEGLGTGVQEF  237
DSSP  EEEellllllleEEEEEEEEEHH...hhhhhLLLLEEEEELLEEEEEEEEEEEHHHHHHH


DSSP  HHHHH.HHHLLLLlEEELLLLEEEEELLLHH.hHLLEEEEEEEEEEEL....
Query WYQFF.NSLLQDSaYEMLPKPCFEVYLNNGA.eDGYWDIEMYVAVQPK....  155
ident                        | |             |       |    
Sbjct ILTVYgTCMPMLN.LTRRKGQDIERYYPAEDdrPINLRCELLIPIRRKlaaa  288
DSSP  HHHHHhLHHHHLL.LEELLLLEEEEELHHHLllLLEEEEEEEEEEELLllll


No 5: 1X60A MOLECULE: SPORULATION-SPECIFIC N-ACETYLMURAMOYL-L-ALANINE

DSSP  llLEEEEELLEEEEEEEEELLHhHHHHHHHHHHHHHHhhlllllleEEEEELLLlllllh
Query mnYEIKQEEKRTVAGFHLVGPWeQTVKKGFEQLMMWVdsknivpkeWVAVYYDNpdetpa   60
ident                                                  |          
Sbjct ..LKKTSSSGLYKVQIGAFKVK.ANADSLASNAEAKG........fDSIVLLKD......   43
DSSP  ..LLLLLLLLEEEEEEEEELLH.HHHHHHHHHHHHHL........lLEEEEEEL......


DSSP  hHLEEEEEEEE.LLLL.....llllLLLLLEEEEELLeeeeeeeeeelllllhhhhhhhh
Query eKLRCDTVVTV.PGYF.....tlpeNSEGVILTEITGgqyavavarvvgddfakpwyqff  114
ident   |                      |                                  
Sbjct .GLYKVQIGAFsSKDNadtlaarakNAGFDAIVILES.......................   79
DSSP  .LEEEEEEEEElLHHHhhhhhhhhhHHLLLLEEEEEL.......................


DSSP  hhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query nsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                          
Sbjct .........................................   79
DSSP  .........................................


No 6: 2J5AA MOLECULE: 30S RIBOSOMAL PROTEIN S6;

DSSP  llleeeeelleEEEEEEEELLHHH.HHHHHHHHHHHHHHHLLLLLLEEEEEELLL.llll
Query mnyeikqeekrTVAGFHLVGPWEQ.TVKKGFEQLMMWVDSKNIVPKEWVAVYYDN.pdet   58
ident                |           || |||       |                   
Sbjct ....hyktlryYETVFAVKPTLSEeEMKKKFEQVKEFIKQKGGEILYEEDWGMRQlaypi   56
DSSP  ....llllleeEEEEEEELLLLLHhHHHHHHHHHHHHHHHLLEEEEEEEEEEEEElllll


DSSP  lhHHLEEEEEEEE.llllllLLLLL..........llEEEEelleeeeeeeeeelllllh
Query paEKLRCDTVVTV.pgyftlPENSE..........gvILTEitggqyavavarvvgddfa  107
ident           |         |                                       
Sbjct qkFNNARYFLVQFktenpqlPNELDfqlkidedvirwLNIQ...................   97
DSSP  llLLEEEEEEEEEeellllhHHHHHhhhhhllleeeeEEEE...................


DSSP  hhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query kpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                 
Sbjct .......................................ikesevkkn  106
DSSP  .......................................elhhhllll


No 7: 2BUJA MOLECULE: SERINE/THREONINE-PROTEIN KINASE 16;

DSSP  .......................lLLEEEEELLEEeeeeeeellhhhhhhhhhhhhhhhh
Query .......................mNYEIKQEEKRTvagfhlvgpweqtvkkgfeqlmmwv   37
ident                                |                            
Sbjct nlyfqghmviidnkhylfiqklgeFSYVDLVEGLH.........................   35
DSSP  llleeeeeeeelleeeeeeeeeelLEEEEEEEELL.........................


DSSP  hhlllllleeeeeellllllllhhhleeeeeeeellllllllllllleeeeeLLEEEEEE
Query dsknivpkewvavyydnpdetpaeklrcdtvvtvpgyftlpensegvilteiTGGQYAVA   97
ident                                                             
Sbjct ..................................................dgHFYALKRI   45
DSSP  ..................................................llLEEEEEEE


DSSP  EEEellllLHHHHHHHHHHHLL......lllEEELllLEEEEELLlhhhhllEEEEEEEE
Query VARvvgddFAKPWYQFFNSLLQ......dsaYEMLpkPCFEVYLNngaedgyWDIEMYVA  151
ident                                                        |    
Sbjct LCH.....EQQDREEAQREADMhrlfnhpniLRLV..AYCLRERG.......AKHEAWLL   91
DSSP  EEL.....LHHHHHHHHHHHHHhhlllllllLLLL..EEEEEEEL.......LEEEEEEE


DSSP  EE..........................................................
Query VQ..........................................................  153
ident                                                             
Sbjct LPffkrgtlwneierlkdkgnfltedqilwlllgicrgleaihakgyahrdlkptnillg  151
DSSP  EEllllllhhhhhhhhhlllllllhhhhhhhhhhhhhhhhhhhhlleelllllhhheeel


DSSP  ............................................................
Query ............................................................  153
ident                                                             
Sbjct degqpvlmdlgsmnqacihvegsrqaltlqdwaaqrctisyrapelfsvqshcvidertd  211
DSSP  lllleeelllllleelleeeelhhhhhhhhhhhhhhllhhhllhhhllllleeeellhhh


DSSP  ............................................................
Query ............................................................  153
ident                                                             
Sbjct vwslgcvlyammfgegpydmvfqkgdsvalavqnqipqsprhssalwqllnsmmtvdphq  271
DSSP  hhhhhhhhhhhhhlllllhhhhhllllhhhhhhllllllllllhhhhhhhhhhllllhhh


DSSP  ..................el
Query ..................pk  155
ident                     
Sbjct rphiplllsqlealqppapg  291
DSSP  lllhhhhhhhhhhlllllll


No 8: 2B7BB MOLECULE: ELONGATION FACTOR 1-ALPHA;

DSSP  llleeeeelleEEEEEEEELLhHHHHHHHHHHHHHhhHHLL.LLLLEEEEEELLLlllll
Query mnyeikqeekrTVAGFHLVGPwEQTVKKGFEQLMMwvDSKN.IVPKEWVAVYYDNpdetp   59
ident                       |                                     
Sbjct .....paaksiVTLDVKPWDD.ETNLEEMVANVKA..IEMEgLTWGAHQFIPIGF.....   47
DSSP  .....llleeeEEEEEELLLL.LLLHHHHHHHHHL..LLLLlEEEEEEEEEEEEL.....


DSSP  hhhLEEEEEEEEL...lllLLLL.lLLLL.........EEEEelleeeeeeeeeelllll
Query aekLRCDTVVTVP...gyfTLPE.nSEGV.........ILTEitggqyavavarvvgddf  106
ident                     |                                       
Sbjct ...GIKKLQINCVveddkvSLDDlqQSIEededhvqstDIAA..................   86
DSSP  ...LEEEEEEEEEeellllLHHHhhHHHLllllllleeEEEE..................


DSSP  hhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query akpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                  
Sbjct .............................................mqal   90
DSSP  .............................................eeel


No 9: 1XRSB MOLECULE: D-LYSINE 5,6-AMINOMUTASE ALPHA SUBUNIT;

DSSP  llleeeeelleeeeeeeeellhhhhhhhhhhhhhhhhhhlllllleeeeeellllllllh
Query mnyeikqeekrtvagfhlvgpweqtvkkgfeqlmmwvdsknivpkewvavyydnpdetpa   60
ident                                                             
Sbjct ............................................................    0
DSSP  ............................................................


DSSP  hhleeeeeeeellllllllllllleeeeelleEEEEEEEEEllllLHHHHHHHHHHHLLL
Query eklrcdtvvtvpgyftlpensegvilteitggQYAVAVARVvgddFAKPWYQFFNSLLQD  120
ident                                                          |  
Sbjct ...............................kVQLSFTLPL..knNERSAEAAKQIALKM   27
DSSP  ...............................lEEEEEEELL..llLHHHHHHHHHHHHLL


DSSP  lLEEEllllEEEEELLlhhhhlLEEEEEEEEEE...........................
Query sAYEMlpkpCFEVYLNngaedgYWDIEMYVAVQ...........................  153
ident    |          |              |                              
Sbjct .GLEE.psvVMQQSLD......EEFTFFVVYGNeilsmeetdeyikenigrkivvvgast   79
DSSP  .LLLL.leeEEEEEEE......LLEEEEEEEELllllhhhhhhhhhhhlllleeeeeeel


DSSP  ............................................................
Query ............................................................  153
ident                                                             
Sbjct gtdahtvgidaimnmkgyaghygleryemidaynlgsqvanedfikkaveleadvllvsq  139
DSSP  llllllhhhhhhhllllllllllhhhllleeeeellllllhhhhhhhhhhlllleeeeel


DSSP  ............................................................
Query ............................................................  153
ident                                                             
Sbjct tvtqknvhiqnmthlielleaeglrdrfvllcggprinneiakelgydagfgpgrfaddv  199
DSSP  llllllhhhhhhhhhhhhhhhlllhhhleeeeelllllhhhhhllllleeelllllhhhh


DSSP  ...........el
Query ...........pk  155
ident              
Sbjct atfavktlndrmn  212
DSSP  hhhhhhhhhhhhl


No 10: 1VBKA MOLECULE: HYPOTHETICAL PROTEIN PH1313;

DSSP  llleeeeellEEEEeEEEE.......LLHHHHHHHHHHHHHHHHHHLLLLLLEEEEEEll
Query mnyeikqeekRTVAgFHLV.......GPWEQTVKKGFEQLMMWVDSKNIVPKEWVAVYyd   53
ident             |                    |                 ||       
Sbjct ..........MNVViVRYGeigtksrQTRSWFEKILMNNIREALVTEEVPYKEIFSRH..   48
DSSP  ..........LLEEeEEELlllllllLLHHHHHHHHHHHHHHHHHHLLLLLLEEEEEL..


DSSP  llllllhhhleEEEEEEELllLLLL.lLLLL......lEEEEELLEEE............
Query npdetpaeklrCDTVVTVPgyFTLP.eNSEG......vILTEITGGQY............   94
ident                |           |          |                     
Sbjct ...........GRIIVKTN..SPKEaaNVLVrvfgivsISPAMEVEASlekinrtallmf   95
DSSP  ...........LEEEEELL..LHHHhhHHHLlllleeeEEEEEEEELLhhhhhhhhhhhh


DSSP  .........eeeeeeelllllhhhhhhHHHHHllllleeelllleeeeelllhhhhllee
Query .........avavarvvgddfakpwyqFFNSLlqdsayemlpkpcfevylnngaedgywd  145
ident                                                             
Sbjct rkkakevgkerpkfrvtarritkefplDSLEI..qakvgeyilnnencevdlknydieig  153
DSSP  hhhhhhhllllleeeeeeeelllllllLHHHH..hhhhhhhhhhhllleelllllleeee


DSSP  eeEEEE......................................................
Query ieMYVA......................................................  151
ident                                                             
Sbjct ieIMQGkayiytekikgwgglpigtegrmigilhdelsalaiflmmkrgvevipvyigkd  213
DSSP  eeEELLeeeeellleellllllllllleeeeelllhhhhhhhhhhhhllleeeeeeelll


DSSP  ............................................................
Query ............................................................  151
ident                                                             
Sbjct dknlekvrslwnllkrysygskgflvvaesfdrvlklirdfgvkgvikglrpndlnsevs  273
DSSP  lhhhhhhhhhhhhhhlllllllllleeellhhhhhhhhhhhllleeellllhhhlllllh


DSSP  ..............................eeel
Query ..............................vqpk  155
ident                                   
Sbjct eitedfkmfpvpvyyplialpeeyiksvkerlgl  307
DSSP  hhhhhhhhlllleelhhhhllhhhhhhhhhhhll


No 11: 1Y7PA MOLECULE: HYPOTHETICAL PROTEIN AF1403;

DSSP  llleeeeelleEEEEEEEEllhhhHHHHHHHHHHHHHHhlllLLLEEEEEELLLLLlllh
Query mnyeikqeekrTVAGFHLVgpweqTVKKGFEQLMMWVDskniVPKEWVAVYYDNPDetpa   60
ident                                 |                           
Sbjct ..........lRGLRIIAE.....NKIGVLRDLTTIIA....NITFAQTFLIKHGE....   37
DSSP  ..........lEEEEEEEE.....LLLLHHHHHHHHLL....LEEEEEEEELLLLL....


DSSP  hhLEEEEEEEELlLLLLLL..LLLL......lEEEEE...LLEEEEeeeeeelllllhhh
Query ekLRCDTVVTVPgYFTLPE..NSEG......vILTEI...TGGQYAvavarvvgddfakp  109
ident                                 |  |                        
Sbjct heGKALIYFEIE.GGDFEKilERVKtfdyiieIEEEEsfeRVFGKR..............   82
DSSP  llLEEEEEEEEL.LLLHHHhhHHHHlllleeeEEEELlhhHHLLEE..............


DSSP  hhhhhhhhllLLLE..................eelllleeeeelllhhhhlleEEEE...
Query wyqffnsllqDSAY..................emlpkpcfevylnngaedgywDIEM...  148
ident            |                                                
Sbjct .viilgggalVSQVaigaiseadrhnlrgerisvdtmpvvgeeeiaeavkavsRLHRaev  141
DSSP  .eeeeelhhhHHHHhhhhhhhhhhhhhlllleeeeeeelllhhhhhhhhhhhhHLLLeee


DSSP  ............................................................
Query ............................................................  148
ident                                                             
Sbjct lvlaggimggkiteevkklrksgirvislsmfgsvpdvadvvisdpvmagtlavmhisek  201
DSSP  eeeellllllhhhhhhhhhhhhlleeeeelllllhhhhlleeellhhhhhhhhhhhhlll


DSSP  ....eeeeeel
Query ....yvavqpk  155
ident            
Sbjct akfdldrvkgr  212
DSSP  llllhhhllll


No 12: 2NXCA MOLECULE: RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE;

DSSP  llleeeeellEEEEEEEeellhhhHHHHHhHHHHHHHhhlLLLLLEEEEEEllllllllh
Query mnyeikqeekRTVAGFHlvgpweqTVKKGfEQLMMWVdskNIVPKEWVAVYydnpdetpa   60
ident             |           |                                   
Sbjct ..........MWVYRLK......gTLEAL.DPILPGL..fDGGARGLWERE.........   32
DSSP  ..........LEEEEEE......lLHHHH.HHHHHHH..hHLLLLEEEEEL.........


DSSP  hhleEEEEEEELllLLLLllLLLLEEEEELLEE..EEEEeeeelllllhhhhhhHHHH..
Query eklrCDTVVTVPgyFTLPenSEGVILTEITGGQ..YAVAvarvvgddfakpwyqFFNS..  116
ident            |               |  |                             
Sbjct ....GEVWAFFP..APVD..LPYEGVWEEVGDEdwLEAW.............rrDLKPal   71
DSSP  ....LEEEEEEL..LLLL..LLLLLEEEELLHHhhHHHH.............hhHLLLee


DSSP  .................hlllLLEE...................................
Query .................llqdSAYE...................................  124
ident                                                             
Sbjct appfvvlapwhtwegaeiplvIEPGghhettrlalkalarhlrpgdkvldlgtgsgvlai  131
DSSP  elleeeelllllllllleeeeLLLLlllhhhhhhhhhhhhhllllleeeeelllllhhhh


DSSP  ............................................................
Query ............................................................  124
ident                                                             
Sbjct aaeklggkalgvdidpmvlpqaeanakrngvrprflegsleaalpfgpfdllvanlyael  191
DSSP  hhhhllleeeeeellhhhhhhhhhhhhhllllleeeellhhhhhhhlleeeeeeellhhh


DSSP  ...........................elllleeeeelllhhhhlleeeeeeeeeeel
Query ...........................mlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                           
Sbjct haalapryrealvpggralltgilkdraplvreamagagfrpleeaaegewvllaygr  249
DSSP  hhhhhhhhhhheeeeeeeeeeeeehhhhhhhhhhhhhllleeeeeeeelleeeeeeel


No 13: 1U0SA MOLECULE: CHEMOTAXIS PROTEIN CHEY;

DSSP  llleeeeelleEEEEEEEELLHHHhHHHHHHHHHHHHHHLLLLLLEEEeeellllllllh
Query mnyeikqeekrTVAGFHLVGPWEQtVKKGFEQLMMWVDSKNIVPKEWVavyydnpdetpa   60
ident                  |                                          
Sbjct .......gfktFYIKVILKEGTQL.KSARIYLVFHKLEELKCEVVRTI....psveeiee   48
DSSP  .......lleeEEEEEELLLLLLL.HHHHHHHHHHHHHHLLLEEEEEE....llhhhhhl


DSSP  hhlEEEEEEEELLllLLLL..LLLL.......LEEEEElleeeeeeeeeelllllhhhhh
Query eklRCDTVVTVPGyfTLPE..NSEG.......VILTEItggqyavavarvvgddfakpwy  111
ident           |     |               ||  |                       
Sbjct ekfENEVELFVISpvDLEKlsEALSsiadierVIIKEV......................   86
DSSP  lllLLEEEEEEEEllLHHHhhHHHHlllllleEEEEEL......................


DSSP  hhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query qffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                             
Sbjct ............................................   86
DSSP  ............................................


No 14: 2OD4A MOLECULE: HYPOTHETICAL PROTEIN;

DSSP  llleeeeelleEEEEEEEEL....LHHHHHHHHH.HHHHHHHHHlllLLLEEEEEELLll
Query mnyeikqeekrTVAGFHLVG....PWEQTVKKGF.EQLMMWVDSkniVPKEWVAVYYDnp   55
ident                             ||                        |     
Sbjct ..gxfagsipxYIRVVSITAqsklQFDXTVTYFEnVWSPKVISL...GAISAEFVQSN..   53
DSSP  ..lllllllllEEEEEEEELllhhHHHHHHHHHHhLHHHHHHHH...LLLEEEEEEEE..


DSSP  llllhhHLEEEEEEEELLL.LLLL..LLLL...........llEEEE.eLLEEEeeeeee
Query detpaeKLRCDTVVTVPGY.FTLP..ENSE...........gvILTE.iTGGQYavavar  100
ident                 |                          |                
Sbjct ......ENSGXYIIHYPDKqTAISvfDKIKpevdevrtqnriqITEGkrLFRVD......  101
DSSP  ......LLEEEEEEEELLHhHHHHhhHHHHhhhhhhhhhleeeEEEEeeEEEEL......


DSSP  elllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query vvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                        
Sbjct .......................................................  101
DSSP  .......................................................


No 15: 2DPIA MOLECULE: DNA POLYMERASE IOTA;

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdak   60
DSSP  lllleeeeeellhhhhhhhhhlhhhlllleeeeelleeeeelhhhhhlllllleehhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct ekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqs  120
DSSP  lllllleeeellllhhhhhhhhhhhhhhhhhllleeeellleeeeelhhhhhhhhhhlll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct delsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkll  180
DSSP  lhhhlllllleehhhlllllllhhhhhhhhhhhhhhhhhhhhhhhhllleeeeeellhhh


DSSP  ...................................LLLEE....................
Query ...................................MNYEI....................    5
ident                                                             
Sbjct aklvsgvfkpnqqtvllpescqhlihslnhikeipGIGYKtakclealginsvrdlqtfs  240
DSSP  hhhhhllllllleeellhhhhhhhhhhlllhhhllLLLHHhhhhhhhlllllhhhhhhll


DSSP  ............................eeelleEEEEEEEEL.......lHHHHHHHHH
Query ............................kqeekrTVAGFHLVG.......pWEQTVKKGF   30
ident                                                             
Sbjct pkilekelgisvaqriqklsfgednspvilsgppQSFSEEDSFkkcsseveAKNKIEELL  300
DSSP  hhhhhhhhlhhhhhhhhhhhllllllllllllllLEEEEEELLllllllllLLHHHHHHH


DSSP  HHHHHHHHHLLLLLLEEEEEElLLLL..............................lllh
Query EQLMMWVDSKNIVPKEWVAVYyDNPD..............................etpa   60
ident   |   |      |                                              
Sbjct ASLLNRVCQDGRKPHTVRLII.RRYSsekhygresrqcpipshviqvmtpmvdilmklfr  359
DSSP  HHHHHHHHHHLLLEEEEEEEE.LLLLllllllleeeeeellhhhhllhhhhhhhhhhhhh


DSSP  hhLEEEEEEEEllllllllllllleeeeelleeeeeeeeeelllllhhhhhhhhhhhlll
Query ekLRCDTVVTVpgyftlpensegvilteitggqyavavarvvgddfakpwyqffnsllqd  120
ident                                                             
Sbjct nmTLLSVCFCN.................................................  370
DSSP  llLLEEEEEEE.................................................


DSSP  lleeelllleeeeelllhhhhlleeeeeeeeeeel
Query sayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                    
Sbjct .................................lk  372
DSSP  .................................el


No 16: 1O5JA MOLECULE: PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN;

DSSP  llleeeeelleEEEEEEEEllhhhHHHHHHHHHHHHHHhlLLLLLEEEEEELLLLL....
Query mnyeikqeekrTVAGFHLVgpweqTVKKGFEQLMMWVDskNIVPKEWVAVYYDNPD....   56
ident                            |  |                 |           
Sbjct .......hhhxILVYSTFP.....NEEKALEIGRKLLE..KRLIACFNAFEIRSGYwwkg   46
DSSP  .......llleEEEEEEEL.....LHHHHHHHHHHHHH..LLLLLEEEEEEEEEEEeell


DSSP  .LLLHhhLEEEEEEEELLLLLLL.lLLLL........lEEEEELLEeeeeeeeeelllll
Query .ETPAekLRCDTVVTVPGYFTLP.eNSEG........vILTEITGGqyavavarvvgddf  106
ident                                       | |                   
Sbjct eIVQD..KEWAAIFKTTEEKEKElyEELRklhpyetpaIFTLKVEN..............   90
DSSP  eEEEE..EEEEEEEEEEHHHHHHhhHHHHhhlllllllEEEEELLL..............


DSSP  hhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query akpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                  
Sbjct ...................................vlteyxnwlresvl  104
DSSP  ...................................llhhhhhhhhhhhl


No 17: 1ZPVA MOLECULE: ACT DOMAIN PROTEIN;

DSSP  llleeeeelleEEEEEEEEL.LHHHHHHHHHHHHHHHHhhlllllleEEEEELLLLllll
Query mnyeikqeekrTVAGFHLVG.PWEQTVKKGFEQLMMWVdsknivpkeWVAVYYDNPdetp   59
ident              |    ||      |                                 
Sbjct .........naXKAIITVVGkDKSGIVAGVSGKIAELG......lniDDISQTVLD....   41
DSSP  .........llEEEEEEEEElLLLLHHHHHHHHHHHLL......leeEEEEEEEEL....


DSSP  hhHLEEEEEEEELllLLLL.LLLL..............lLEEEeelleeeeeeeeeelll
Query aeKLRCDTVVTVPgyFTLP.ENSE..............gVILTeitggqyavavarvvgd  104
ident         ||                                                  
Sbjct .eYFTXXAVVSSD..EKQDfTYLRnefeafgqtlnvkinIQSA.................   81
DSSP  .lEEEEEEEEEEL..LLLLhHHHHhhhhhhhhhhleeeeEEEH.................


DSSP  llhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query dfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                    
Sbjct ...............................................aife   85
DSSP  ...............................................hhll


No 18: 2OAUA MOLECULE: SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL;

DSSP  ...........................................................l
Query ...........................................................m    1
ident                                                             
Sbjct yavnivaalaiiivgliiarmisnavnrlmisrkidatvadflsalvrygiiaftliaal   60
DSSP  lhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhllhhhhhhhhhhhhhhhhhhhhhhhh


DSSP  lleeeeelleeeeeeeeellhhhhhhhhhhhhhhhhhhlllllleeeeeellllllllhh
Query nyeikqeekrtvagfhlvgpweqtvkkgfeqlmmwvdsknivpkewvavyydnpdetpae   61
ident                                                             
Sbjct grvgvqtasviavlgaaglavglalqgslsnlaagvllvmfrpfrageyvdlggvagtvl  120
DSSP  hhlllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhllllllleeelllleeeee


DSSP  hleeeeeeeelLLLLLL......lllllleeeeellEEEEEEEEEEL.LLLLHHHHHHHH
Query klrcdtvvtvpGYFTLP......ensegvilteitgGQYAVAVARVV.GDDFAKPWYQFF  114
ident                                              |    |         
Sbjct svqifsttmrtADGKIIvipngkiiagniinfsrepVRRNEFIIGVAyDSDIDQVKQILT  180
DSSP  eellleeeeeeLLLLEEeeehhhhhhlleeelllllEEEEEEEEEELlLLLHHHHHHHHH


DSSP  HHHLLLllEEEL.LLLEE.eeELLLhhhHLLEEEEEEEEEE...................
Query NSLLQDsaYEML.PKPCF.evYLNNgaeDGYWDIEMYVAVQ...................  153
ident |          |                         |                      
Sbjct NIIQSE..DRILkDREMTvrlNELG...ASSINFVVRVWSNsgdlqnvywdvlerikref  235
DSSP  HHHHHL..LLLLlLLLEEeeeEELL...LLLEEEEEEEEEEhhhhhhhhhhhhhhhhhhh


DSSP  .................el
Query .................pk  155
ident                    
Sbjct daagisfpypqmdvnfkrv  254
DSSP  hhhllllllleeeeeeell


No 19: 2DCLA MOLECULE: HYPOTHETICAL UPF0166 PROTEIN PH1503;

DSSP  llleeeeelleEEEEEEEEllHHHH...hHHHHHHHHHHHHHlLLLLleEEEEELLLLll
Query mnyeikqeekrTVAGFHLVgpWEQT...vKKGFEQLMMWVDSkNIVPkeWVAVYYDNPde   57
ident                                             |               
Sbjct ...vevehwntLRLRIYIG..ENDKwegrPLYKVIVEKLREM.GIAG..ATVYRGIYG..   50
DSSP  ...llllllleEEEEEEEE..LLLEelleEHHHHHHHHHHHL.LLLL..EEEEELLEE..


DSSP  llhHHLEEEEEEEELLLLLLL.lLLLL......lEEEEelleeeeeeeeeelllllhhhh
Query tpaEKLRCDTVVTVPGYFTLP.eNSEG......vILTEitggqyavavarvvgddfakpw  110
ident      |     |   |       |          |  |                      
Sbjct .fgTDLPIIVEVVDRGHNIEKvvNVIKpmikdgmITVE......................   87
DSSP  .elLLLEEEEEEEEEHHHHHHhhHHHLlllllleEEEE......................


DSSP  hhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query yqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                              
Sbjct .................................ptivlwvgtqee   99
DSSP  .................................eleeeellllll


No 20: 1TZ0A MOLECULE: HYPOTHETICAL PROTEIN;

DSSP  llleeeeelLEEEEEEEEEL...LHHHHHHHHHHhhhHHHHhLLLLLLEEEEEELLLllL
Query mnyeikqeeKRTVAGFHLVG...PWEQTVKKGFEqlmMWVDsKNIVPKEWVAVYYDNpdE   57
ident                             |             |                 
Sbjct ........gYXFIETKTFTVkegTSNIVVERFTG..eGIIE.KFEGFIDLSVLVKKV..R   47
DSSP  ........lLLEEEEEEEEElllLHHHHHHHLLL..lLLHH.HLLLEEEEEEEELLL..L


DSSP  LLHhhLEEEEEEEE.LLLL..LLLLLL....................llLEEEEELLEEe
Query TPAekLRCDTVVTV.PGYF..TLPENS....................egVILTEITGGQy   94
ident                                                             
Sbjct RGD..EEVVVXIRWeSEEAwkNWETSEehlaghragrgkpkpdhiinvdHAVYYVKSSK.  104
DSSP  LLL..EEEEEEEEElLHHHhhHHHLLLlllhhhllllllllhhheeeeeEEEEELLLLL.


DSSP  eeeeeeelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeEEE
Query avavarvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvaVQP  154
ident                                                             
Sbjct .........................................................AAY  107
DSSP  .........................................................LLL


DSSP  L
Query K  155
ident  
Sbjct Q  108
DSSP  L


No 21: 1O51A MOLECULE: HYPOTHETICAL PROTEIN TM0021;

DSSP  llleeeeelleEEEEEEEEllHHHH...hHHHHHHHHHHHHHlLLLLleEEEEELLLLll
Query mnyeikqeekrTVAGFHLVgpWEQT...vKKGFEQLMMWVDSkNIVPkeWVAVYYDNPde   57
ident                  |                                          
Sbjct ........hhxKLLKIYLG..EKDKhsgkPLFEYLVKRAYEL.GXKG..VTVYRGIXG..   45
DSSP  ........leeEEEEEEEE..LLLEelleEHHHHHHHHHHHL.LLLL..LEEEELLLL..


DSSP  llhHHLEEEEEEEELLlLLLL..LLLL.....llEEEEelleeeeeeeeeelllllhhhh
Query tpaEKLRCDTVVTVPGyFTLP..ENSE.....gvILTEitggqyavavarvvgddfakpw  110
ident      |                              |                       
Sbjct fghPDLPIVLEIVDEEeRINLflKEIDnidfdglVFTA......................   83
DSSP  lllLLLEEEEEEEELHhHHHHhhHHHHlllllleEEEE......................


DSSP  hhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query yqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                              
Sbjct .......................................dvnvvk   89
DSSP  .......................................eeelll


No 22: 1JMTA MOLECULE: SPLICING FACTOR U2AF 35 KDA SUBUNIT;

DSSP  llleeeeellEEEEEeEEEL............lHHHHHHHHHHHHHHHHHHLLLLLLEEE
Query mnyeikqeekRTVAGfHLVG............pWEQTVKKGFEQLMMWVDSKNIVPKEWV   48
ident                                          ||        |     |  
Sbjct ........sqTIALLnIYRNpqdglrsavsdveMQEHYDEFFEEVFTEMEEKYGEVEEMN   52
DSSP  ........llEEEEEeEEELlllhhhhhhhhhhHHHHHHHHHHHHHHHHHHHLLLEEEEE


DSSP  EEELLLLllllhhhLEEEEEEEE.....LLLLLLL.lLLLL....LEEEEELleeeeeee
Query AVYYDNPdetpaekLRCDTVVTV.....PGYFTLP.eNSEG....VILTEITggqyavav   98
ident               |     |                |                      
Sbjct VCDNLGD......hLVGNVYVKFrreedAEKAVIDlnNRWFngqpIHAELSP........   98
DSSP  ELLLLLL......lLEEEEEEEEllhhhHHHHHHHhlLLEElleeLLEEELL........


DSSP  eeelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query arvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                          
Sbjct .........................................................   98
DSSP  .........................................................


No 23: 2UUUA MOLECULE: ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE;

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct mgspkehidlyqqikwngwgdtrkflhqlkpsgtiamttpevssvplpslrgfikkeltk   60
DSSP  lllllllllhhhhllllllllllleeeelllllleeeelllllleelllhhhhhhhhlll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct pfvldetpalqienihvdppkqypefvrelkafflpdqlkddklarithtfgkslrdlir  120
DSSP  lllllllllllhhhlllllllllhhhhhhhhllllhhheellhhhhhhllllllhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct vrigqvknapdlivlphsheeverlvqlahkynvviipmgggsnivgaiepvsnerftvs  180
DSSP  hhllllllllleeellllhhhhhhhhhhhhhhlleeeeelllllllllllllllllleee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct idmrrmnkvlwvdrremtaciqvgimgpelekqlhkqgvslghdpdsfefstlggwlatc  240
DSSP  eelllllleeeeelllleeeeellllhhhhhhhhhhlleelllllllhhhllhhhhhhhl


DSSP  ....................................................llleeeee
Query ....................................................mnyeikqe    8
ident                                                             
Sbjct ssghqsdkygdiedmavsfrtvtptgtlelrginykhiilgsegtlgiiteavmkvhavp  300
DSSP  lllllhhhhllhhhheeeeeeeelleeelllllllhhhhlllllllleeeeeeeeleell


DSSP  lleeEEEEEEEllhhHHHHHHhhhhhhhhhhlLLLLLEEEEEEL................
Query ekrtVAGFHLVgpweQTVKKGfeqlmmwvdskNIVPKEWVAVYY................   52
ident       ||                           |                        
Sbjct qaveYYGFLFP..tfAHAVSA....lqqirssEVIPTMIRVYDPeetqlsfawkpskgav  354
DSSP  leeeEEEEEEL..lhHHHHHH....hhhhhhhLLLLLEEEEELHhhhhhhhhllllllll


DSSP  .........lllllLLHHHL..EEEEEEEE.llllLLLL............lllLLEE..
Query .........dnpdeTPAEKL..RCDTVVTV.pgyfTLPE............nseGVIL..   86
ident                        |                              |     
Sbjct seftsamvkkylhyIRSFDFknVCLSIIGFegpkkVVDFhrtsvfdilsknaafGLGSap  414
DSSP  lllhhhhhhhhhhhLLLLLLllLEEEEEEEeelhhHHHHhhhhhhhhhhlllleEEEEel


DSSP  .....eEELLE............EEEEEEEEELLLLLHHHHHHHHHHH.LLLL...LEEE
Query .....tEITGG............QYAVAVARVVGDDFAKPWYQFFNSL.LQDS...AYEM  125
ident                           ||   |        |                   
Sbjct gktwaeKRYDLpyirdflldhnmWVDVAETTVSYANLQTLWKDAKQTFvKHFKdqgIPAW  474
DSSP  llhhhhHHHHHhhhhhhhhllleEEEEEEEEEEHHHHHHHHHHHHHHHhHHHHlllLLEE


DSSP  llllEEEEElLLHHhhLLEEEEEEEeEEEL..............................
Query lpkpCFEVYlNNGAedGYWDIEMYVaVQPK..............................  155
ident     |                                                       
Sbjct ...iCAHIS.HTYT..NGVCLYFIF.ASKQnenkdmaqyieakklmtdiifkyggslsrg  527
DSSP  ...eEEEEE.EEEL..LEEEEEEEE.EEELllllllhhhhhhhhhhhhhhhhllllllll


DSSP  .......................
Query .......................  155
ident                        
Sbjct winvyrslketidpkdicnprkl  550
DSSP  hhhhhhhhhhhhlllllllllll


No 24: 2GIFA MOLECULE: ACRIFLAVINE RESISTANCE PROTEIN B;

DSSP  ............................llleeeeeLLEEEEEEEEEL...LHHHHHH.H
Query ............................mnyeikqeEKRTVAGFHLVG...PWEQTVK.K   28
ident                                                             
Sbjct pnffidrpifawviaiiimlagglailklpvaqyptIAPPAVTISASYpgaDAKTVQDtV   60
DSSP  lllllllhhhhhhhhhhhhhhhhhhhhhlleellllLLLLEEEEEEELlllLHHHHHHhL


DSSP  HHHHHHHHhhhLLLL.LLEEEEEellllllllhhHLEEEEEEEEL..LLLLL........
Query GFEQLMMWvdsKNIV.PKEWVAVyydnpdetpaeKLRCDTVVTVP..GYFTL........   77
ident              |                            |                 
Sbjct TQVIEQNM...NGIDnLMYMSSN........sdsTGTVQITLTFEsgTDADIaqvqvqnk  109
DSSP  HHHHHLLL...LLLLlEEEEEEE........eelLLEEEEEEEELllLLHHHhhhhhhhh


DSSP  ............lllllLLEEEEE....................................
Query ............penseGVILTEI....................................   89
ident                   |                                         
Sbjct lqlampllpqevqqqgvSVEKSSSsflmvvgvintdgtmtqedisdyvaanmkdaisrts  169
DSSP  hhhhhhhllhhhhllllEEEELLLllleeeeeelllllllhhhhhhhhhhhlhhhhhhll


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct gvgdvqlfgsqyamriwmnpnelnkfqltpvdvitaikaqnaqvaagqlggtppvkgqql  229
DSSP  leeeeeelllleeeeeeelhhhhhhllllhhhhhhhhhhhlllleeeeelllllllllll


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct nasiiaqtrltsteefgkillkvnqdgsrvllrdvakielggenydiiaefngqpasglg  289
DSSP  leeeelllllllhhhhhlleeeellllleeehhhheeeeeeellllleeeelleeeeeee


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct iklatganaldtaaairaelakmepffpsglkivypydttpfvkisihevvktlveaiil  349
DSSP  eeelllllhhhhhhhhhhhhhhhhhhlllllleeeeeelhhhhhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct vflvmylflqnfratliptiavpvvllgtfavlaafgfsintltmfgmvlaigllvddai  409
DSSP  hhhhhhhhhllllllhhhhhhhhhhhhhhhhhhhhlllleehhhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct vvvenvervmaeeglppkeatrksmgqiqgalvgiamvlsavfvpmaffggstgaiyrqf  469
DSSP  hhhhhhhhhhhhllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhllllhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct sitivsamalsvlvaliltpalcatmlkpiakgdhgegkkgffgwfnrmfeksthhytds  529
DSSP  hhhhhhhhhhhhhhlllhhhhhhhhllllllllllllllllllhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct vggilrstgrylvlyliivvgmaylfvrlpssflpdedqgvfmtmvqlpagatqertqkv  589
DSSP  hhhhhhllhhhhhhhhhhhhhhhhhhhhlllllllllllleeeeeeellllllhhhhhhh


DSSP  ............................................................
Query ............................................................   89
ident                                                             
Sbjct lnevthyyltkeknnvesvfavngfgfagrgqntgiafvslkdwadrpgeenkveaitmr  649
DSSP  hhhhhhhhhhhlllleeeeeeeeeelllleeeeeeeeeeeellllllllllllhhhhhhh


DSSP  .........................lleEEEEEEEEELLLLLHHHHHHHHhHHLL.....
Query .........................tggQYAVAVARVVGDDFAKPWYQFFnSLLQ.....  119
ident                                       |    |        |       
Sbjct atrafsqikdamvfafnlpaivelgtatGFDFELIDQAGLGHEKLTQARNqLLAEaakhp  709
DSSP  hhhhhhhllllleeeellllllllllllEEEEEEEELLLLLHHHHHHHHHhHHHHhhlll


DSSP  lLLEEE......................................................
Query dSAYEM......................................................  125
ident                                                             
Sbjct dMLTSVrpngledtpqfkididqekaqalgvsindinttlgaawggsyvndfidrgrvkk  769
DSSP  lLEEEEeellllleeeeeeeelhhhhhhllllhhhhhhhhhhhhlleeeeeeeelleeee


DSSP  .........................................lllleEEEElllhhhhlle
Query .........................................lpkpcFEVYlnngaedgyw  144
ident                                                             
Sbjct vyvmseakyrmlpddigdwyvraadgqmvpfsafsssrweygsprlERYN........gl  821
DSSP  eeeeelhhhlllhhhhhhleeellllleeehhhleeeeeeeelleeEEEL........le


DSSP  EEEE........................................................
Query DIEM........................................................  148
ident                                                             
Sbjct PSMEilgqaapgkstgeamelmeqlasklptgvgydwtgmsyqerlsgnqapslyaisli  881
DSSP  EEEEeeeeelllllhhhhhhhhhhhhhllllleeeeellhhhhhhhllllhhhhhhhhhh


DSSP  ............................................................
Query ............................................................  148
ident                                                             
Sbjct vvflclaalyeswsipfsvmlvvplgvigallaatfrgltndvyfqvgllttiglsakna  941
DSSP  hhhhhhhhhhllllhhhhhhllhhhhhhhhhhhhhhllllllhhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................  148
ident                                                             
Sbjct ilivefakdlmdkegkglieatldavrmrlrpilmtslafilgvmplvistgagsgaqna 1001
DSSP  hhhhhhhhhhhhlllllhhhhhhhhhhhllhhhhhhhhhhhhhhhhhhhlllllhhhhhh


DSSP  ........................eeeeeel
Query ........................yvavqpk  155
ident                                
Sbjct vgtgvmggmvtatvlaiffvpvffvvvrrrf 1032
DSSP  hhhhhhhhhhhhhhhhhhhhhhhhhhhhlll


No 25: 2FRPA MOLECULE: MAJOR CAPSID PROTEIN;

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv   60
DSSP  llllllllhhhhllleeeeeeellllllllllllleeeelllleeelleeeeelllleee


DSSP  .........llleeeeelleEEEEEEEEL..........lHHHHHHHHHHHHHHHHHHLL
Query .........mnyeikqeekrTVAGFHLVG..........pWEQTVKKGFEQLMMWVDSKN   41
ident                                                    |        
Sbjct aekalkpesditfskqtanvKTIAHWVQAsrqvmddapmlQSYINNRLMYGLALKEEGQL  120
DSSP  lllllllllleeeelleeelEEEEEEEEEehhhhhhlllhHHHHHHHHHHHHHHHHHHHH


DSSP  ............................................................
Query ............................................................   41
ident                                                             
Sbjct lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh  180
DSSP  hhllllllllllhhhhleellhhhllllllhhhhhhhhhhhhhllllllleeeelhhhhh


DSSP  ...................................................lLLLE.EEE
Query ...................................................iVPKE.WVA   49
ident                                                             
Sbjct niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvWDRMdATV  240
DSSP  hhhlllllllllllllllllllleelleeeeellllllleeeeelhhhheeeEELEeEEE


DSSP  EELLLLLLLL.hhHLEEEEEEEELLLlllllllllleeeeelleeeeeeeeeelllllhh
Query VYYDNPDETP.aeKLRCDTVVTVPGYftlpensegvilteitggqyavavarvvgddfak  108
ident               |                                             
Sbjct EVSREDRDNFvknMLTILCEERLALA..................................  266
DSSP  EEELLLLLLLlllEEEEEEEEEELEE..................................


DSSP  hhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query pwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                
Sbjct .................................hyrptaiikgtfss  280
DSSP  .................................ellhhheeeeelll


No 26: 2F1FA MOLECULE: ACETOLACTATE SYNTHASE ISOZYME III SMALL SUBUNIT;

DSSP  llleeeeelleeEEEEEEEllhhhhhHHHHHHHHHHHHHLLLLLLEEEEEELLLlllllh
Query mnyeikqeekrtVAGFHLVgpweqtvKKGFEQLMMWVDSKNIVPKEWVAVYYDNpdetpa   60
ident                  |                                  |       
Sbjct .........arrILSVLLE.....neSGALSRVIGLFSQRGYNIESLTVAPTDD......   40
DSSP  .........leeEEEEEEE.....llLLHHHHHHHHHHLLLLLLLEEEEEELLL......


DSSP  hHLEEEEEEEELL...lLLLLlLLLL......lEEEEelleeeeeEEEEEL...llllhh
Query eKLRCDTVVTVPG...yFTLPeNSEG......vILTEitggqyavAVARVV...gddfak  108
ident             |                                    |          
Sbjct .PTLSRMTIQTVGdekvLEQIeKQLHklvdvlrVSELgqgahverEIMLVKiqasgygrd   99
DSSP  .LLEEEEEEEEELlhhhHHHHhHHHHhllleeeEEEHhhlleeeeEEEEEEeelllhhhh


DSSP  hhhhhhHHHL............lllleeelllleeeeelllhhhhlLEEEE.....eeee
Query pwyqffNSLL............qdsayemlpkpcfevylnngaedgYWDIE.....myva  151
ident                                                             
Sbjct evkrntEIFRgqiidvtpslytvqlagtsgkldaflasirdvakivEVARSgvvglsrgd  159
DSSP  hhhhhhHHLLleeeeellleeeeeeeelhhhhhhhhhhhlllleeeEEEELlleeeelll


DSSP  eeel
Query vqpk  155
ident     
Sbjct kimr  163
DSSP  llll


No 27: 2EWHA MOLECULE: MAJOR CARBOXYSOME SHELL PROTEIN 1A;

DSSP  llleeeeelleEEEEEEEEllhhhHHHHHHHHHHHHHHHllLLLLEEEEEELLllllllh
Query mnyeikqeekrTVAGFHLVgpweqTVKKGFEQLMMWVDSknIVPKEWVAVYYDnpdetpa   60
ident                               |                             
Sbjct .........giALGMIETR.....GLVPAIEAADAMTKA..AEVRLVGRQFVG.......   37
DSSP  .........llEEEEEEEE.....LHHHHHHHHHHHHHH..LLEEEEEEEEEE.......


DSSP  hHLEEEEEEEELLLL.............llllllllLEEEeeLLEEeeeeeeeelllllh
Query eKLRCDTVVTVPGYF.............tlpensegVILTeiTGGQyavavarvvgddfa  107
ident         |                                                   
Sbjct .GGYVTVLVRGETGAvnaavragadacervgdglvaAHIIarVHSE..............   82
DSSP  .LLEEEEEEEELHHHhhhhhhhhhhhhlllllleeeEEEEllLLHH..............


DSSP  hhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query kpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                 
Sbjct ......................................venilpkapq   92
DSSP  ......................................hhllllllll


No 28: 1IUJA MOLECULE: HYPOTHETICAL PROTEIN TT1380;

DSSP  llleeeeelleEEEEEEEEL...LHHHHHHHHHHHhHHHHHhLLLLLLEEEEEELLLLll
Query mnyeikqeekrTVAGFHLVG...PWEQTVKKGFEQlMMWVDsKNIVPKEWVAVYYDNPde   57
ident             |            ||            ||               ||  
Sbjct ..........mFVTMNRIPVrpeYAEQFEEAFRQR.ARLVD.RMPGFIRNLVLRPKNP..   46
DSSP  ..........lEEEEEEELLlhhHHHHHHHHHHHH.HHHHL.LLLLEEEEEEEEELLL..


DSSP  llhhHLEEEEEEEE.LLLL..LLLLL....................lllLEEEEELLEEE
Query tpaeKLRCDTVVTV.PGYF..TLPEN....................segVILTEITGGQY   94
ident                         |                            |      
Sbjct ....GDPYVVMTLWeSEEAfrAWTESpafkegharsgtlpkeaflgpnrLEAFEVVLDSE  102
DSSP  ....LLLEEEEEEElLHHHhhHHHLLhhhhhhlllllllllllllllleEEEEEEEEELL


DSSP  eeeeeeelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeee
Query avavarvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqp  154
ident                                                             
Sbjct ............................................................  102
DSSP  ............................................................


DSSP  l
Query k  155
ident  
Sbjct .  102
DSSP  .


No 29: 2PEBA MOLECULE: PUTATIVE DIOXYGENASE;

DSSP  llleeeeelLEEEEEEEEEllHHHHhHHHHHHHHHHHHhlLLLLlEEEE..eELLLllll
Query mnyeikqeeKRTVAGFHLVgpWEQTvKKGFEQLMMWVDskNIVPkEWVA..vYYDNpdet   58
ident              |                                              
Sbjct ..kedtieiAGFHAHVYFD..AASR.DVAARVREGLGA..RFEV.QLGRwfdKPIG....   48
DSSP  ..lllhhhlLEEEEEEEEL..HHHH.HHHHHHHHHHHH..HLLL.EEEEeelLLLL....


DSSP  lhhhlEEEEEEEELLL.LLLL.LLLL......LLEEEEELLEEEeeeeeeelllllhhhh
Query paeklRCDTVVTVPGY.FTLP.ENSE......GVILTEITGGQYavavarvvgddfakpw  110
ident           |      |                     ||                   
Sbjct ..phpKGXYQVAFLPNqFDKVvPWLXlnreglDILVHPETGDAV.......sdhavyslw   99
DSSP  ..lllLEEEEEEELHHhHHHHhHHHHhhllllLEEEEEELLLHH.......hhhhlllee


DSSP  hhhhhhhlllllEEELllleeeeelllhhhhlleeeeeeeeeeel
Query yqffnsllqdsaYEMLpkpcfevylnngaedgywdiemyvavqpk  155
ident                                              
Sbjct lgaalalnieflRQLS.............................  115
DSSP  elllllllhhhhHHLL.............................


No 30: 2E29A MOLECULE: ATP-DEPENDENT RNA HELICASE DDX50;

DSSP  .........llleeeEELLEEEEEEEEELLHHHhHHHHHHHHHHHHHHLLLLLLEEEEEE
Query .........mnyeikQEEKRTVAGFHLVGPWEQtVKKGFEQLMMWVDSKNIVPKEWVAVY   51
ident                                   |      |     |            
Sbjct gssgssgfeprslitSDKGFVTMTLESLEEIQD.VSCAWKELNRKLSSNAVSQITRMCLL   59
DSSP  lllllllllllllllLLLLEEEEEEELLLLLLL.LHHHHHHHHHHLLHHHHLLLEEEEEL


DSSP  LLllllllhhhLEEEeeEEELLL.LLLL.LLLL....LLEEEeelleeeeeeeeeellll
Query YDnpdetpaekLRCDtvVTVPGY.FTLP.ENSE....GVILTeitggqyavavarvvgdd  105
ident                    ||                                       
Sbjct KG.........NMGV.cFDVPTTeSERLqAEWHdsdwILSVP..................   91
DSSP  LL.........LLEE.eEEEEHHhHHHHhHHLLllllEEELL..................


DSSP  lhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query fakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                   
Sbjct .................................................a   92
DSSP  .................................................l


No 31: 1Z1ZA MOLECULE: MINOR TAIL PROTEIN U;

DSSP  .........................................llleeEEEL......leEE
Query .........................................mnyeiKQEE......krTV   13
ident                                                  |          
Sbjct khtelraavldalekhdtgatffdgrpavfdeadfpavavyltgaeYTGEeldsdtwqAE   60
DSSP  lllhhhhhhhhhhhhhllllleellllllllhhhlleeeeeellllLLLLllllllllLE


DSSP  EEEEEEL....LHHHHHHHHHHHHHHHHHHLL......lLLLEEEEEELLLLLLLLhhHL
Query AGFHLVG....PWEQTVKKGFEQLMMWVDSKN......iVPKEWVAVYYDNPDETPaeKL   63
ident            |                                   |    |       
Sbjct LHIEVFLpaqvPDSELDAWMESRIYPVMSDIPalsdlitSMVASGYDYRRDDDAGL..WS  118
DSSP  EEEEEEEllllLHHHHHHHHHHHHHHHHHHLHhhhhhllLLLLLLEEEELLLLLLL..LE


DSSP  EEEEEEEELLLlllllllllleeeeelleeeeeeeeeelllllhhhhhhhhhhhllllle
Query RCDTVVTVPGYftlpensegvilteitggqyavavarvvgddfakpwyqffnsllqdsay  123
ident   |                                                         
Sbjct SADLTYVITYE.................................................  129
DSSP  EEEEEEELLLL.................................................


DSSP  eelllleeeeelllhhhhlleeeeeeeeeeel
Query emlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                 
Sbjct ................................  129
DSSP  ................................


No 32: 2JOQA MOLECULE: HYPOTHETICAL PROTEIN HP_0495;

DSSP  .....llleeeeelleEEEEEEEEL.LHHHhhHHHHHHHHHHHhhllllllEEEEEELLL
Query .....mnyeikqeekrTVAGFHLVG.PWEQtvKKGFEQLMMWVdsknivpkEWVAVYYDN   54
ident                                     | |                     
Sbjct qghmpsdskkptiiypCLWDYRVIMtTKDT..STLKELLETYQ.......rPFKLEFKNT   51
DSSP  llllllllllllllllEEEEEEEEElLLLL..LHHHHHHHLLL.......lLEEEEEEEE


DSSP  LLLLLhhHLEEEEEEEElllLLLLllLLLLeeeeelleeeeeeeeeelllllhhhhhhhh
Query PDETPaeKLRCDTVVTVpgyFTLPenSEGVilteitggqyavavarvvgddfakpwyqff  114
ident                 |          |                                
Sbjct SKNAK..FYSFNVSMEV...SNESerNEIF..............................   76
DSSP  LLLLL..LEEEEEEEEE...LLHHhhHHHH..............................


DSSP  hhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query nsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                          
Sbjct ..........................qkisqldkvvqtlgs   91
DSSP  ..........................hhhllllleeeeell


No 33: 2FY1A MOLECULE: RNA-BINDING MOTIF PROTEIN, Y CHROMOSOME, FAMILY

DSSP  llleeeeellEEEEEEEEellhhHHHHhHHHHHHHHHHHLlLLLLEEEEEeLLLLllllh
Query mnyeikqeekRTVAGFHLvgpweQTVKkGFEQLMMWVDSKnIVPKEWVAVyYDNPdetpa   60
ident                                 |            |      |       
Sbjct ....mveadhPGKLFIGG....lNRET.NEKMLKAVFGKH.GPISEVLLI.KDRT.....   44
DSSP  ....llllllLLEEEEEL....lLLLL.LHHHHHHHHHLL.LLLLEEEEE.LLLL.....


DSSP  hHLEEEEEEEE.LLLLLLL..LLLL.........LLEEEEELLEEeeeeeeeelllllhh
Query eKLRCDTVVTV.PGYFTLP..ENSE.........GVILTEITGGQyavavarvvgddfak  108
ident  | |     |                         |        |               
Sbjct sKSRGFAFITFeNPADAKNaaKDMNgkslhgkaiKVEQAKKPSFQ............sgg   92
DSSP  lLLLLEEEEELlLHHHHHHhhHHLLlllllllllEEEELLLLLLL............lll


DSSP  hhhhhhhhhLLLLLeeelllleeeeelllhhhhlleeeeeeeeeeel
Query pwyqffnslLQDSAyemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                
Sbjct rrrppassrNRSPS...............................gs  108
DSSP  lllllllllLLLLL...............................ll


No 34: 2DITA MOLECULE: HIV TAT SPECIFIC FACTOR 1 VARIANT;

DSSP  ....llleeeeelleEEEEE..EEELLHH....HHHHHHHHHHHHHHHhLLLLLLEEEEE
Query ....mnyeikqeekrTVAGF..HLVGPWE....QTVKKGFEQLMMWVDsKNIVPKEWVAV   50
ident                 |                       | |      |          
Sbjct gssgssggpsrmrheRVVIIknMFHPMDFeddpLVLNEIREDLRVECS.KFGQIRKLLLF   59
DSSP  lllllllllllllllLEEEEelLLLLLHHhhllHHHHHHHHHHHHHHH.HLLLLLEEEEE


DSSP  ellllllllhhhLEEEEEEEE.LLLL..LLLLLLLL.........LEEEEELleeeeeee
Query yydnpdetpaekLRCDTVVTV.PGYF..TLPENSEG.........VILTEITggqyavav   98
ident                   |                |               |        
Sbjct .........drhPDGVASVSFrDPEEadYCIQTLDGrwfggrqitAQAWDGT........  102
DSSP  .........lllLLLEEEEELlLHHHhhHHHHHLLLleelleeleEEELLLL........


DSSP  eeelllllhhhhhhhhhhhllllleeellLLEEeeelllhhhhlleeeeeEEEEEEl
Query arvvgddfakpwyqffnsllqdsayemlpKPCFevylnngaedgywdiemYVAVQPk  155
ident                                                          
Sbjct .............................TDYQ.................SGPSSG.  112
DSSP  .............................LLLL.................LLLLLL.


No 35: 1XHOA MOLECULE: CHORISMATE MUTASE;

DSSP  llleeeeelleEEEEEEEELL...hHHHHHHHHHHHHHHHHHLLLL...LLEEEEEELLL
Query mnyeikqeekrTVAGFHLVGP...wEQTVKKGFEQLMMWVDSKNIV...PKEWVAVYYDN   54
ident                             |      |                        
Sbjct ..........vWAIRGATTVSdntaDEIVAETQKLLKEXAEKNGLEeddIISIIFTVTKD   50
DSSP  ..........lEEEEEEEELLlllhHHHHHHHHHHHHHHHHHLLLLhhhEEEEEEEELLL


DSSP  L.........................llllhhHLEEEEEEEELLL..lLLLLllllleee
Query P.........................detpaeKLRCDTVVTVPGY..fTLPEnsegvilt   87
ident                                          |                  
Sbjct LdaafpaiaarnxgwtstalxcxneidvpgslEKCIRVXXHVNTDkdkKDIK........  102
DSSP  LlllllhhhhhhlllllleeeeeellllllllLLEEEEEEEELLLllhHHLL........


DSSP  eelleeeeeeeeeelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeee
Query eitggqyavavarvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdie  147
ident                                                             
Sbjct ..........................................................hv  104
DSSP  ..........................................................le


DSSP  eeeeeeel
Query myvavqpk  155
ident         
Sbjct ylngakvl  112
DSSP  elhhhhhl


No 36: 2BX6A MOLECULE: XRP2 PROTEIN;

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct kvdpkdymfsglkdetvgrlpgtvagqqfliqdcencniyifdhsatvtiddctnciifl   60
DSSP  lllhhhheeellllleeeellllllllleeeellllleeeelllllleeeellllleeee


DSSP  .......................................lLLEE................
Query .......................................mNYEI................    5
ident                                            |                
Sbjct gpvkgsvffrncrdckctlacqqfrvrdcrklevflccatQPIIesssnikfgcfqwyyp  120
DSSP  eeeeeeeeeelleeeeeeeeeeeeeeelleeeeeeeeellLLEEelleeeeeeellllll


DSSP  ............................................................
Query ............................................................    5
ident                                                             
Sbjct elafqfkdaglsifnntwsnihdftpvlnwsllpedavvqdyvpiptteelkavrvstea  180
DSSP  lhhhhhhhllllllllllllleelllllleeellllllhhhlllllllhhhhllllllll


DSSP  ...........eeelleEEEEEEEELLhHHHHHHHHHHHHHHHHhlLLLLleEEEEELLL
Query ...........kqeekrTVAGFHLVGPwEQTVKKGFEQLMMWVDskNIVPkeWVAVYYDN   54
ident                        |      |           |                 
Sbjct nrsivpisrgqrqkssdESCLVVLFAG.DYTIANARKLIDEMVG..KGFF.lVQTKEVSM  236
DSSP  lllllllllllllllllLEEEEEELLL.LLHHHHHHHHHHHHHH..LLLE.eEEEEEELL


DSSP  LL...............llLHHHLEEEEEEEELllLLLL.lLLLL...............
Query PD...............etPAEKLRCDTVVTVPgyFTLP.eNSEG...............   83
ident                                                             
Sbjct KAedaqrvfrekapdflplLNKGPVIALEFNGD..GAVEvcQLIVneifngtkmfvsesk  294
DSSP  LHhhhhhhhhhhhhhlhhhLLLLLEEEEEEELL..LHHHhhHHHHhhhllllleeelllh


DSSP  ..leeEEELleeeeeeeeeelllllhhhhhhhhhhhllllleeelLLLEeeeelllhhhh
Query ..vilTEITggqyavavarvvgddfakpwyqffnsllqdsayemlPKPCfevylnngaed  141
ident                                                             
Sbjct etasgDVDS..................................fyNFAD...........  309
DSSP  hhhhhHHHH..................................hhHHHH...........


DSSP  lleeeeeeeeeeel
Query gywdiemyvavqpk  155
ident               
Sbjct ............iq  311
DSSP  ............hl


No 37: 2BTUA MOLECULE: PHOSPHORIBOSYL-AMINOIMIDAZOLE SYNTHETASE;

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct eageavsrmkkhvqttmrkevlggfggmfdlskfaleepvlvsgtdgvgtklmlafmadk   60
DSSP  lllllllllllllhhhlllleellllleeelllllllleeeeeeeeellllhhhhhhhll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct hdtigidavamcvndivvqgaeplffldyiacgkaepskienivkgisegcrqagcalig  120
DSSP  lllhhhhhhhhhhhhhhlllleeeeeeeeeeellllhhhhhhhhhhhhhhhhhhlleeee


DSSP  .............................llleeeeeLLEEEEEEEEELLHH........
Query .............................mnyeikqeEKRTVAGFHLVGPWE........   23
ident                                            |    |           
Sbjct getaempgmysteeydlagftvgivdkkkivtgekieAGHVLIGLASSGIHSngyslvrk  180
DSSP  eeeeellllllllleeeeeeeeeeeelllllllllllLLLEEEEEELLLLLLllhhhhhh


DSSP  .......................HHHHhhHHHHHHHHHHlLLLLLEEEEEELL.......
Query .......................QTVKkgFEQLMMWVDSkNIVPKEWVAVYYD.......   53
ident                         |               |                   
Sbjct vlledgeliygrlelplgeellkPTKI..YVKPILELLK.NHEVYGMAHITGGgfienip  237
DSSP  hhhlllllllllllllhhhhhllLLLL..LHHHHHHHHH.HLLLLLLEELLLLhhhhhlh


DSSP  ................................llllllhhhlEEEEEEEELLLLLLL.lL
Query ................................npdetpaeklRCDTVVTVPGYFTLP.eN   80
ident                                               || |          
Sbjct rmlpegigaeielgswkiqpifsllqevgkleekemfnifnmGIGMVVAVKEEDAKDivR  297
DSSP  hhlllleeeeellllllllhhhhhhhhhhlllhhhhllllllLEEEEEEELLLLHHHhhH


DSSP  LLL.....LEEEEELLEEEeeeeeeelllllhhhhhhhhhhhllllleeelllleeeeel
Query SEG.....VILTEITGGQYavavarvvgddfakpwyqffnsllqdsayemlpkpcfevyl  135
ident               |                                             
Sbjct LLEeqgetARIIGRTVQGA.........................................  316
DSSP  HHHhhlllEEEEEEEEELL.........................................


DSSP  llhhhhlleeeeEEEEeeel
Query nngaedgywdieMYVAvqpk  155
ident                     
Sbjct ............GVTF...n  321
DSSP  ............LEEE...l


No 38: 2QECA MOLECULE: HISTONE ACETYLTRANSFERASE HPA2 AND RELATED

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct xsptvlpatqadfpkivdvlveafandptflrwipqpdpgsaklralfelqiekqyavag   60
DSSP  llleeeellhhhhhhhhhhhhhhhlllhhhhlllllllhhhhhhhhhhhhhhhhlhhhhe


DSSP  ....................................lllEEEEelleeeeeeeeellhhh
Query ....................................mnyEIKQeekrtvagfhlvgpweq   24
ident                                                             
Sbjct nidvardsegeivgvalwdrpdprlvsifgkaaarfhpkFPHW.................  103
DSSP  eeeeeellllleeeeeeeelllllhhhhhllllllllllLLLE.................


DSSP  hhhhhhhhhhhhhhhlllllleeeeeellllllllhhhleeeeeeeelllllllllllll
Query tvkkgfeqlmmwvdsknivpkewvavyydnpdetpaeklrcdtvvtvpgyftlpensegv   84
ident                                                             
Sbjct ......................................ylytvatsssargtgvgsalln  125
DSSP  ......................................eeeeeeelhhhllllhhhhhhh


DSSP  eeeeelLEEEEEEEEEellllLHHHHHHHHHHHllllleeellllEEEEELLLhHHHLLE
Query ilteitGGQYAVAVARvvgddFAKPWYQFFNSLlqdsayemlpkpCFEVYLNNgAEDGYW  144
ident       |       |                                  |      ||  
Sbjct hgiaraGDEAIYLEAT.....STRAAQLYNRLG...........fVPLGYIPS.DDDGTP  168
DSSP  hhhhhhLLLLEEEEEL.....LHHHHHHHHHLL...........lEEEEEELL.LLLLLL


DSSP  EEEEEEEEEEL..
Query DIEMYVAVQPK..  155
ident              
Sbjct ELAXWKPPAXPtv  181
DSSP  EEEEEELLLLLll


No 39: 2FKLA MOLECULE: AMYLOID BETA A4 PROTEIN PRECURSOR;

DSSP  llleeeeelleEEEEEEEELLHhHHHHHHHHHHHHHHHHLLLLLLEEEEEELLLLllllh
Query mnyeikqeekrTVAGFHLVGPWeQTVKKGFEQLMMWVDSKNIVPKEWVAVYYDNPdetpa   60
ident                         |              |                    
Sbjct ...allvpdkcKFLHQERMDVC.ETHLHWHTVAKETCSEKSTNLHDYGMLLPCGI.....   51
DSSP  ...llleelllEEEEEELLLLL.EEHHHHHHHHHHHHHHLLEEEEEEEEEEELLL.....


DSSP  hhleEEEEEEEllllllllllllleeeeelleeeeeeeeeelllllhhhhhhhhhhhlll
Query eklrCDTVVTVpgyftlpensegvilteitggqyavavarvvgddfakpwyqffnsllqd  120
ident                                                             
Sbjct .dkfRGVEFVC.................................................   61
DSSP  .leeEEEEEEE.................................................


DSSP  lleeelllleeeeelllhhhhlleeeeeeeeeeel
Query sayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                    
Sbjct ................................cpl   64
DSSP  ................................eel


No 40: 2EWCA MOLECULE: CONSERVED HYPOTHETICAL PROTEIN;

DSSP  ............llleeeeelleeeEEEE..eeLLHHHHHHHHHHHHHHHHHHLLL...L
Query ............mnyeikqeekrtvAGFH..lvGPWEQTVKKGFEQLMMWVDSKNI...V   43
ident                                     |      |                
Sbjct tirrydvnedrghtglveagdfyylNYCVgnvgQDIESQINGAFDEXERRLALVGLtldA   60
DSSP  lleeeeeelllleeeeeeelleeeeEEELllllLLHHHHHHHHHHHHHHHHHLLLLlhhH


DSSP  LLEEEEEELL............................lllLLLHHHLEEEEEEEELLLl
Query PKEWVAVYYD............................npdETPAEKLRCDTVVTVPGYf   75
ident          |                                     |            
Sbjct VVQXDCLFRDvwnipvxekxikerfngryparksiqtefahHGGPQGLLFQVDGVAYSK.  119
DSSP  EEEEEEEELLhhhhhhhhhhhhhhlllllleeeeeelllllLLLLLLLLEEEEEEEELL.


DSSP  llllllllleeeeelleeeeeeeeeelllllhhhhhhhhhhhllllleeelllleeeeel
Query tlpensegvilteitggqyavavarvvgddfakpwyqffnsllqdsayemlpkpcfevyl  135
ident                                                             
Sbjct ............................................................  119
DSSP  ............................................................


DSSP  llhhhhlleeeeeeeeeeel
Query nngaedgywdiemyvavqpk  155
ident                     
Sbjct ...................h  120
DSSP  ...................l


No 41: 1M55A MOLECULE: REP PROTEIN;

DSSP  llleeeeelleEEEEEEEEL..................................lHHHHH
Query mnyeikqeekrTVAGFHLVG..................................pWEQTV   26
ident                                                             
Sbjct .......matfYEVIVRVPFdveehlpgisdsfvdwvtgqiwelppesdlnltlvEQPQL   53
DSSP  .......lleeEEEEEELLLllllllllllhhhhhhhhhllllllllllllhhhlLHHHH


DSSP  HHHHHHHHHHHHHLL.....lLLLEEEEEELLllllllhhhLEEEEEEEELL......lL
Query KKGFEQLMMWVDSKN.....iVPKEWVAVYYDnpdetpaekLRCDTVVTVPG......yF   75
ident               |                                  |          
Sbjct TVADRIRRVFLYEWNkfskqeSKFFVQFEKGS.........EYFHLHTLVETsgissmvL  104
DSSP  HHHHHHHHHHHHHHHhhhlllLLEEEEEEELL.........LLEEEEEEEELllllhhhH


DSSP  LLL.LLLL.................lLEEEeelleeeeeeeeeelllllhhhhhhhhhhh
Query TLP.ENSE.................gVILTeitggqyavavarvvgddfakpwyqffnsl  117
ident                           |  |                              
Sbjct GRYvSQIRaqlvkvvfqgiepqindwVAIT...............kvkkggankvvdsgy  149
DSSP  HHHhHHHHhhhhhhllllllllllllEEEL...............lllllllllleellh


DSSP  llllleeelllLEEEEELLlhhhhllEEEE.......eeeeEEEL.
Query lqdsayemlpkPCFEVYLNngaedgyWDIE.......myvaVQPK.  155
ident                   |                           
Sbjct ipayllpkvqpELQWAWTN..ldeykLAALnleerkrlvaqFLAEs  193
DSSP  hhhhlllllllLEEEEEEL..lhhhlLHHHlhhhhhhhhhhHHHLl


No 42: 2PFDA MOLECULE: FORMIMIDOYLTRANSFERASE-CYCLODEAMINASE;

DSSP  ........................................lLLEEEEE............
Query ........................................mNYEIKQE............    8
ident                                                             
Sbjct sqlvecvpnfsegnnqevidaisqaisqtpgcvlldvdagpSTNRTVYtfvgqpecvveg   60
DSSP  lleeeelleelllllhhhhhhhhhhlllllleeeeeeeeelLLLEEEEeeeelhhhhhhh


DSSP  ............................................................
Query ............................................................    8
ident                                                             
Sbjct alsaartasqlidxrkhkgehprxgaldvcpfipvrgvsxdecvlcakafgqrlaeelnv  120
DSSP  hhhhhhhhhllllhhhlllllllllllleeeeeeeelllhhhhhhhhhhhhhhhhhhhll


DSSP  ..........................................................ll
Query ..........................................................ek   10
ident                                                             
Sbjct pvylygeaaqxpsrqtlpairageyealpeklkqaewvpdfgpssfvpswgatvtgarkf  180
DSSP  leeeeellllllllllhhhhlllllllhhhhllllllllllllllllllllleeeeelll


DSSP  eEEEEEEEEllhhhHHHHHHHHHHHHH.........HHLLLLLleeeEEELLllllllhh
Query rTVAGFHLVgpweqTVKKGFEQLMMWV.........DSKNIVPkewvAVYYDnpdetpae   61
ident        |      |                          |                  
Sbjct lIAFNINLL....sTKEQAHRIALNLReqgrgkdqpGRLKKVQ.gigWYLEE........  227
DSSP  lEEEEEEEL....lLHHHHHHHHHHHLlllllllllLLLLLEE.eeeEEELL........


DSSP  hLEEEEEEEELLL...LLLL.lLLLL...........lEEEEEL................
Query kLRCDTVVTVPGY...FTLP.eNSEG...........vILTEIT................   90
ident                                                             
Sbjct kNLAQVSTNLLDFevtALHTvyEEARreaqelnlpvvgSQLVGLvplkalldaaafycdk  287
DSSP  lLEEEEEEEELLLlllLHHHhhHHHHhhhhllllleeeEEEELLllhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................   90
ident                                                             
Sbjct eklfvleeehrirlvvnrlgldslapfdpkeriieylvpdsgpeqslldaslrafvrevg  347
DSSP  hllllllhhhhhhhhhhlllllllllllhhhhlhhhhlllllllllhhhllhhhhhhhhl


DSSP  ............................................................
Query ............................................................   90
ident                                                             
Sbjct arsaapgggsvaaavaalgaalasxvgqxtygrrqfdhldstxrrlippfhaasaqltsl  407
DSSP  llllllllhhhhhhhhhhhhhhhhhhhhhlllllllhhhhhhhhhhhhhhhhhhhhhhlh


DSSP  ............................................................
Query ............................................................   90
ident                                                             
Sbjct vdadarafaaclgaiklpkntpeerdrrtcalqeglrqavavplklaetvsqlwpalqel  467
DSSP  hhhhhhhhhhhhhhhllllllhhhlllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh


DSSP  ........leeeeeeeeeelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhl
Query ........ggqyavavarvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedg  142
ident                                                             
Sbjct aqcgnlsclsdlqvaakaletgvfgayfnvlinlkdxtddvfkektrhrissllqeaktq  527
DSSP  llllllllhhhhhhhhhhhhhhhhhhhhhhhhhhlllllhhhhhhhhhhhhhhhhhhhhh


DSSP  leeeeeeeeeeel
Query ywdiemyvavqpk  155
ident              
Sbjct aalvlgslearke  540
DSSP  hhhhhhhhhhhll


No 43: 2OD6A MOLECULE: HYPOTHETICAL PROTEIN;

DSSP  llleeeeelleEEEEEEEEL....LHHHHHHHHHhhhhHHHHHL.LLLLLEEEEEELLLL
Query mnyeikqeekrTVAGFHLVG....PWEQTVKKGFeqlmMWVDSK.NIVPKEWVAVYYDNP   55
ident                           |            ||                 | 
Sbjct .....gxaepkFTSFTTADFindvDXELFIDAVEktapVWVKEXkSRGLLKFSXNRVWNK   55
DSSP  .....llllllEEEEEEEEEllhhHHHHHHHHHHhhhhHHHHHHhLLLEEEEEEEEELLL


DSSP  LLllhhHLEEEEEEEEL..llLLLL.LLLL.................llEEEEelleeee
Query DEtpaeKLRCDTVVTVP..gyFTLP.ENSE.................gvILTEitggqya   95
ident  |      |            |       |                              
Sbjct GE....VFRVVXTYEYKdrasFEANiAYLEdtfgknpvflqlvttakftTSRC.......  104
DSSP  LL....LEEEEEEEEELlhhhHHHHhHHHHhhllllllhhhhlllleeeEEEE.......


DSSP  eeeeeelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query vavarvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                             
Sbjct ......................................................lvvxev  110
DSSP  ......................................................eeeeel


No 44: 2CZ8A MOLECULE: TT0972 PROTEIN;

DSSP  llleeeeELLEEEEEEEEEL..LHHHHHHHHHHHHHHHHhhllllllEEEEE.ELLL...
Query mnyeikqEEKRTVAGFHLVG..PWEQTVKKGFEQLMMWVdsknivpkEWVAV.YYDN...   54
ident                         |                       |  |        
Sbjct .......GKVYKKVELVGTSeeGLEAAIQAALARARKTL.....rhlDWFEVkEIRGtig   48
DSSP  .......LLEEEEEEEEEEEllLHHHHHHHHHHHHHHHL.....lleEEEEEeEEEEeee


DSSP  lLLLLhhHLEE.EEEEEELLLlllllllllleeeeelleeeeeeeeeelllllhhhhhhh
Query pDETPaeKLRC.DTVVTVPGYftlpensegvilteitggqyavavarvvgddfakpwyqf  113
ident               |                                             
Sbjct eAGVK..EYQVvLEVGFRLEE.......................................   67
DSSP  lLEEE..EEEEeEEEEEELLL.......................................


DSSP  hhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query fnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                           
Sbjct ..........................................   67
DSSP  ..........................................


No 45: 2A0FB MOLECULE: ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN;

DSSP  llleeeeelleEEEEEeeellhhhhhhhHHHHHHHHHHHLLLL....lLEEE..EEELll
Query mnyeikqeekrTVAGFhlvgpweqtvkkGFEQLMMWVDSKNIV....pKEWV..AVYYdn   54
ident            ||                                               
Sbjct ...qveaikrgTVIDH...........iPAQIGFKLLSLFKLTetdqrITIGlnLPSG..   44
DSSP  ...llllllllLLEEL...........lLLLLLLHHHHLLLLLlllllLLLEeeEELL..


DSSP  lllllhhhlEEEEEEEELLLLL...LLLLLL....LLEEEE.elleeeeeeeeeelllll
Query pdetpaeklRCDTVVTVPGYFT...LPENSE....GVILTE.itggqyavavarvvgddf  106
ident                     |                                       
Sbjct .......emGRKDLIKIENTFLsedQVDQLAlyapQATVNRidnyevvgksrpslperid   97
DSSP  .......llLEEEELLLLLLLLllhHHHLLLllllLLEELLlllllllllllllllleee


DSSP  hhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query akpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                  
Sbjct nvlvcpnsncishaepvsssfavrkrandialkckycekefshnvvlan  146
DSSP  llllllllllllllllllleeelllllllllleelllllllllllllll


No 46: 1P2ZA MOLECULE: HEXON PROTEIN;

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct mmpqwsymhisgqdaseylspglvqfaratetyfslnnkfrnptvapthdvttdrsqrlt   60
DSSP  lhhhhhhlllllllhhhhllhhhhhhhhhhllllllhhhlllllllllllllllllllle


DSSP  ..LLLE.EEEELleeeeeeeeellhhhhhhhhhhhhhhhhhhlllllleeeeeellllll
Query ..MNYE.IKQEEkrtvagfhlvgpweqtvkkgfeqlmmwvdsknivpkewvavyydnpde   57
ident                                                             
Sbjct lrFIPVdREDTA................................................   72
DSSP  eeELLLeEEELL................................................


DSSP  llhhhleeeeeeeellllllllllllleeeeellEEEEEEEEEELL.LLLHHhhHHHHhh
Query tpaeklrcdtvvtvpgyftlpensegvilteitgGQYAVAVARVVG.DDFAKpwYQFFns  116
ident                                      |     |             |  
Sbjct .................................ySYKARFTLAVGDnRVLDM.aSTYF..   96
DSSP  .................................lEEEEEEEEEELLlLLEEH.hHEEE..


DSSP  hLLLL.......................................................
Query lLQDS.......................................................  121
ident                                                             
Sbjct .DIRGvldrgptfkpysgtaynalapkgapnsceweqthvyaqaplsgetitksglqigp  155
DSSP  .EEEEeeelllllllllllllllllllllllleeellleeelllleellleelleellll


DSSP  ............................................................
Query ............................................................  121
ident                                                             
Sbjct vyadpsyqpepqigesqwneadanaaggrvlkkttpmkpcygsyarptnpfggqsvlvlp  215
DSSP  llllllllllllllllllllllllleeeeeelllllllllllleelllllllllllllll


DSSP  ............................................................
Query ............................................................  121
ident                                                             
Sbjct kvdlqffsnatkpkvvlysedvnmetpdthlsykpgkgdenskamlgqqsmpnrpnyiaf  275
DSSP  lleeeeellllllleeeeeellleellleeeeellllllllllhhhhleeeellllleee


DSSP  ....leEELL....LLEEEEELL.....................................
Query ....ayEMLP....KPCFEVYLN.....................................  136
ident        |                                                    
Sbjct rdnfigLMYYnstgNMGVLAGQAsqlnavvdlqdrntelsyqllldsigdrtryfsmwnq  335
DSSP  lhhhllLLLLllhhHLLEEEELLlllllllllllllhhhhhhhhhhhhlllllllhhhll


DSSP  ............................................................
Query ............................................................  136
ident                                                             
Sbjct avdsydpdvriienhgtedelpnycfplggigvtdtyqaikattwtkdetfatrneigvg  395
DSSP  llllllhhhhleellllllllleeellllllllleeelleelllleellllllleeelll


DSSP  ............................................................
Query ............................................................  136
ident                                                             
Sbjct nnfameinlnanlwrnflysnialylpdklkynptnveisdnpntydymnkrvvapglvd  455
DSSP  lllleeelhhhhhhhhhhhhhlhhhllhhhlllllllllllllllhhhhhhllllhhhhl


DSSP  ......................................................lhhhhl
Query ......................................................ngaedg  142
ident                                                             
Sbjct cyinlgarwsldymdnvnpfnhhrnaglryrsmllgngryvpfhiqvpqkffaiknllll  515
DSSP  llllllleellhhhhllllllllllhhhhhhhhhhlllleeeeeeeelllllllllleel


DSSP  LEEEEEEEEEEE................................................
Query YWDIEMYVAVQP................................................  154
ident                                                             
Sbjct PGSYTYEWNFRKdvnmvlqsslgndlrvdgasikfdsiclyatffpmahntastleamlr  575
DSSP  LEEEEEEEEEELlhhhheeellllllllllleeeeeeeeeeeelllllhhhhhhhhhhhl


DSSP  ............................................................
Query ............................................................  154
ident                                                             
Sbjct ndtndqsfndylsaanmlypipanatnvpisipsrnwaafrgwaftrlktketpslgsgy  635
DSSP  lhhhleeeelllleeeeeeeellllleeeeeeeeelllllleeeeeeeehhhllllllll


DSSP  ............................................................
Query ............................................................  154
ident                                                             
Sbjct dpyytysgsipyldgtfylnhtfkkvaitfdssvswpgndrlltpnefeikrsvdgegyn  695
DSSP  llllllllllhhhhlllllhhheeeeeeeellleeellllllllllleellllhhhhhhl


DSSP  ............................................................
Query ............................................................  154
ident                                                             
Sbjct vaqcnmtkdwflvqmlanynigyqgfyipesykdrmysffrnfqpmsrqvvddtkykeyq  755
DSSP  lllllllhhhhhhhhhhhhlllllllllllllllllllhhhhleeeeeeeelllllllll


DSSP  ............................................................
Query ............................................................  154
ident                                                             
Sbjct qvgilhqhnnsgfvgylaptmregqaypanvpypligktavdsitqkkflcdrtlwripf  815
DSSP  lllhhhlllllllllllllllllllllllllllllllllllleeeeeeeellllleeeel


DSSP  ............................................................
Query ............................................................  154
ident                                                             
Sbjct ssnfmsmgaltdlgqnllyansahaldmtfevdpmdeptllyvlfevfdvvrvhqphrgv  875
DSSP  llllllllllllhhhlhhhlllleeeeeeeeelllllleeeeeeeeleeeeeeellllll


DSSP  ...........l
Query ...........k  155
ident             
Sbjct ietvylrtpfsa  887
DSSP  leeeeeeellll


No 47: 1J5UA MOLECULE: ARCHEASE, POSSIBLE CHAPERONE;

DSSP  lllEEEEELLEEEEEEEEELLHHHHHHHHHHHHHHHHHH.....................
Query mnyEIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDS.....................   39
ident      |  |          |                                        
Sbjct hhhXRKPIEHTADIAYEISGNSYEELLEEARNILLEEEGivldteekekxypleetedaf   60
DSSP  lllLLLLLLLLLLEEEEEEELLHHHHHHHHHHHHHHHHLleeeeeeeeeeeellllhhhh


DSSP  .....................................LLLLLLEEE..eEELLLlllLLH
Query .....................................KNIVPKEWV..aVYYDNpdeTPA   60
ident                                           |                 
Sbjct fdtvndwileiskgwapwrikregnelkvtfrkirkkEGTEIKALTyhlLKFER...DGD  117
DSSP  hhhhhhhhhhhhlleeeeeeeeelleeeeeeeeeeelLLLLLLEELlllLLLEE...ELL


DSSP  HhLEEEEEEEEllllllllllllleeeeelleeeeeeeeeelllllhhhhhhhhhhhlll
Query EkLRCDTVVTVpgyftlpensegvilteitggqyavavarvvgddfakpwyqffnsllqd  120
ident   |    |                                                    
Sbjct V.LKTKVVFDT.................................................  127
DSSP  E.EEEEEEEEL.................................................


DSSP  lleeelllleeeeelllhhhhlleeeeeeeeeeel
Query sayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                    
Sbjct ...................................  127
DSSP  ...................................


No 48: 2NRKA MOLECULE: HYPOTHETICAL PROTEIN GRPB;

DSSP  llleeeeelleeeeeeeeelLHHHHHHHHHHHHHHHHHhllLLLLEEEEEEL.llLLLLl
Query mnyeikqeekrtvagfhlvgPWEQTVKKGFEQLMMWVDsknIVPKEWVAVYY.dnPDETp   59
ident                      |          |                      |    
Sbjct .............ivteyqpAWVEQFEEEAQALKQILK...ENCLKVEHIGStsvPNLA.   43
DSSP  .............lllllllHHHHHHHHHHHHHHHHHH...HHEEEEEEELHhhlLLLL.


DSSP  hhHLEEEEEEEE.LLLL..LLLL..LLLLL............................ee
Query aeKLRCDTVVTV.PGYF..TLPE..NSEGV............................il   86
ident   |   |  | |        |       |                               
Sbjct .aKPIIDFLVIVeEIEKvdLLQWefERIGYeyxgefglsgrrylrkgpikrthhvhiyqf  102
DSSP  .lLLLEEEEEEElLLHHhhHHHHhhHHLLLeelllllllleeeeeelllllleeeeeeel


DSSP  eEELLeeeeeeeeeelllllhhhHHHHHHH......................hllllleE
Query tEITGgqyavavarvvgddfakpWYQFFNS......................llqdsayE  124
ident                                                             
Sbjct dNTQE........ilrhlafrnyLRENPAIattygtlkkqlaqahpdsidkyxkdafikK  154
DSSP  lLHHH........hhhhhhhhhhHHHLHHHhhhhhhhhhhhhllllllhhhhllhhhhhH


DSSP  ELLlleeeeelllhhhhlleeeeeeEEEE.el
Query MLPkpcfevylnngaedgywdiemyVAVQ.pk  155
ident                                 
Sbjct IEK.....................eALKKywe  165
DSSP  HHH.....................hHHHHhll


No 49: 2FB0A MOLECULE: CONSERVED HYPOTHETICAL PROTEIN;

DSSP  llleeeeellEEEEeeEEELL....HHHHHHHHHHHHHHHHHhllLLLLEEEEeELLLll
Query mnyeikqeekRTVAgfHLVGP....WEQTVKKGFEQLMMWVDsknIVPKEWVAvYYDNpd   56
ident                   |       |       |                         
Sbjct .......ansXIRL.nVFVRVnetnREKAIEAAKELTACSLK..eEGCIAYDT.FESS..   47
DSSP  .......lllLEEE.eEEEELllllHHHHHHHHHHHHHHHLL..lLLEEEEEE.EELL..


DSSP  LLLHhhLEEEeEEEELLL..LLLLlLLLLL...............eEEEElleeeeeeee
Query ETPAekLRCDtVVTVPGY..FTLPeNSEGV...............iLTEItggqyavava   99
ident              |                                  |           
Sbjct TRRD..VFXI.CETWQNAevLAAHeKTAHFaqyvgiiqelaexkleKFEF..........   94
DSSP  LLLL..EEEE.EEEELLHhhHHHHlLLHHHhhhhhhhhhhleeeeeEEEL..........


DSSP  eelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query rvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                         
Sbjct ........................................................   94
DSSP  ........................................................


No 50: 2A0IA MOLECULE: TRAI PROTEIN;

DSSP  lLLEEEEEL....LEEEeeeeeellhhhhhhhhhhhhhhhhhhlllllleeeEEELllll
Query mNYEIKQEE....KRTVagfhlvgpweqtvkkgfeqlmmwvdsknivpkewvAVYYdnpd   56
ident     | |                                                     
Sbjct .MMSIAQVRsagsAGNF............................ytdvlgsGERW.agr   30
DSSP  .LEEEEEELlhhhHHHH............................lllllllLLEE.elh


DSSP  lllhhhLEEEeeeeellllllllllllleEEEE........................lLE
Query etpaekLRCDtvvtvpgyftlpensegviLTEI........................tGG   92
ident       |                                                    |
Sbjct gaeqlgLQGS.................vdKDVFtrllegrlpdgadlsrmqdgsnrhrPG   73
DSSP  hhhhllLLLL.................llHHHHhhhhhllllllllllllllllllllLE


DSSP  EEEEEEEE...ELLL.......LLHHHHHHHHHHHLL.LLLE........eeLLLLEEEE
Query QYAVAVAR...VVGD.......DFAKPWYQFFNSLLQ.DSAY........emLPKPCFEV  133
ident       |                             |               |    |  
Sbjct YDLTFSAPksvSMMAmlggdkrLIDAHNQAVDFAVRQvEALAstrvtvltgnLVMALFNH  133
DSSP  EEEEEELLhhhHHHHhllllhhHHHHHHHHHHHHHHHhHHHLeellleelllLLEEEEEE


DSSP  ELLLhhhhllEEEEEEEEE.........................................
Query YLNNgaedgyWDIEMYVAV.........................................  152
ident                   |                                         
Sbjct DTSR...dqePQLHTHAVVanvtqhngewktlssdkvgktgfienvyanqiafgrlyrek  190
DSSP  EELL...lllEEEEEEEEEelllllllllllllllllllllhhhhhhhlhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................  152
ident                                                             
Sbjct lkeqvealgyetevvgkhgmwempgvpveafsgrsqtireavgedaslksrdvaaldtrk  250
DSSP  hhhhhhhllllleellhhhleelllllhhhhlhhhhhhhhhllllllhhhhhhhhhhlll


DSSP  ........................................eel
Query ........................................qpk  155
ident                                            
Sbjct skqhvdpeikmaewmqtlketgfdirayrdaadqradlrtltp  293
DSSP  llllllhhhhhhhhhhhhhlllllhhhhhhhhhhhhhhhhlll


No 51: 1YWQA MOLECULE: NITROREDUCTASE FAMILY PROTEIN;

DSSP  .................................................llLEEEE....
Query .................................................mnYEIKQ....    7
ident                                                             
Sbjct satttnlkeaivnrrsirkvtkndaitkerieevlktalhaptsfnmqsgrMVVLMdgeh   60
DSSP  llllllhhhhhhhlllllleellllllhhhhhhhhhhhlllllhhhllleeEEEEEhhhh


DSSP  ..ELLEeeeeeeeellhhhhhhhhhhhhhhhhhhlllllleeeeeellllllllhhhlee
Query ..EEKRtvagfhlvgpweqtvkkgfeqlmmwvdsknivpkewvavyydnpdetpaeklrc   65
ident                                                             
Sbjct ekFWDI......................................................   66
DSSP  hhHHHH......................................................


DSSP  eeeeEELLLLLLLlllllLEEE..eELLE....EEEEEEEEE................lL
Query dtvvTVPGYFTLPensegVILT..eITGG....QYAVAVARV................vG  103
ident     |                |     |                                
Sbjct .vkeTLRARVPAE....nFEATverLKGFhagvGTVLFFEDQatvekmqenaplykdqfP  121
DSSP  .hhhHHHHHLLHH....hHHHHhhhHHHHhlllEEEEEEEEHhhhhhhhhhlhhhlllhH


DSSP  LLL.HHHHHHHHHHHLLL..LLEEELlllEEEEE......lllhhhhlLEEEEEEEEEEE
Query DDF.AKPWYQFFNSLLQD..SAYEMLpkpCFEVY......lnngaedgYWDIEMYVAVQP  154
ident                                                  |          
Sbjct FWShQGNAMLQHTVWMLLsaEGIGAS..lQHYNPivdaevketwnipaEWSLVGQMPFGE  179
DSSP  HHHhHHHHHHHHHHHHHHhhLLLEEL..lLLLLLllhhhhhhhlllllLEEEEEEEEEEE


DSSP  L...................
Query K...................  155
ident                     
Sbjct Pneqpaertflptedvvkfy  199
DSSP  Elllllllllllhhhhllll


No 52: 1TELA MOLECULE: RIBULOSE BISPHOSPHATE CARBOXYLASE, LARGE SUBUNIT;

DSSP  llleeeeelleeeeeeeeellhhhhhhhhhhhhhhhhhhlllllleeeeeellLLLLllh
Query mnyeikqeekrtvagfhlvgpweqtvkkgfeqlmmwvdsknivpkewvavyydNPDEtpa   60
ident                                                      |      
Sbjct ....................................................mNAED...    5
DSSP  ....................................................lLHHH...


DSSP  hhleeeeeeeellllllllllllleeeEELLE...EEEEEEEEELlLLLHHHHHHHHHHH
Query eklrcdtvvtvpgyftlpensegviltEITGG...QYAVAVARVVgDDFAKPWYQFFNSL  117
ident                            |                |  |       |    
Sbjct ...................vkgffasrESLDMeqyLVLDYYLESV.GDIETALAHFCSEQ   45
DSSP  ...................hhhhlllhHHLLHhheEEEEEEEEEE.LLHHHHHHHHHHHH


DSSP  LL............llLEEEllllEEEEELLLHHHH......llEEEEEEEEEEEL....
Query LQ............dsAYEMlpkpCFEVYLNNGAED......gyWDIEMYVAVQPK....  155
ident                                                    |        
Sbjct STaqwkrvgvdedfrlVHAA..kvIDYEVIEELEQLsypvkgkiHACRVTIAHPHCnfgp  103
DSSP  LLllllllllllllhhHHLL..eeEEEEEEEEELLLllllllleEEEEEEEEEEHHhlll


DSSP  ............................................................
Query ............................................................  155
ident                                                             
Sbjct kipnlltavcgegtyftpgvpvvklmdihfpdtyladfegpkfgieglrdilnahgrpif  163
DSSP  lhhhhhhhhllhhhhhllllleeeeeeeellhhhhllllllllhhhhhhhhhllllllee


DSSP  ............................................................
Query ............................................................  155
ident                                                             
Sbjct fgvvkpniglspgefaeiayqswlggldiakddemladvtwssieeraahlgkarrkaea  223
DSSP  eeellllllllhhhhhhhhhhhhhhllleeellllllllllllhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................  155
ident                                                             
Sbjct etgepkiylanitdevdslmekhdvavrnganallinalpvglsavrmlsnytqvpligh  283
DSSP  hhlllleeeeellllhhhhhhhhhhhhhhllleeeeehhhhlhhhhhhhhlllllleeee


DSSP  ............................................................
Query ............................................................  155
ident                                                             
Sbjct fpfiasfsrmekygihskvmtklqrlagldavimpgfgdrmmtpeeevlenviectkpmg  343
DSSP  llllhhhhllllleelhhhhhhhhhhhllleeeeelllllllllhhhhhhhhhhhhllll


DSSP  ............................................................
Query ............................................................  155
ident                                                             
Sbjct rikpclpvpggsdsaltlqtvyekvgnvdfgfvpgrgvfghpmgpkagaksirqaweaie  403
DSSP  llllleeeeelllllllhhhhhhhhllllleellllllllllllhhhhhhhhhhhhhhhh


DSSP  .....................
Query .....................  155
ident                      
Sbjct qgisietwaethpelqamvdq  424
DSSP  llllhhhhhlllhhhhhhhhl


No 53: 1IVZA MOLECULE: HYPOTHETICAL PROTEIN 1110008I14RIK;

DSSP  ..LLLEEEEEllEEEEeeEEEL..............lHHHHHHHHHHHHHHHHHHLLL..
Query ..MNYEIKQEekRTVAgfHLVG..............pWEQTVKKGFEQLMMWVDSKNI..   42
ident                                        ||       |        |  
Sbjct gsSGSSGSSSsqHFNL.nFTITnlpysqdiaqpsttkYQQTKRSIENALNQLFRNSSIks   59
DSSP  llLLLLLLLLllEEEE.eEELLlllllhhhhllllhhHHHHHHHHHHHHHHHHHHLLLll


DSSP  LLLEEEEE.ELLLlLLLLhhHLEEEEEEEE.....lLLLLL....lLLLL..........
Query VPKEWVAV.YYDNpDETPaeKLRCDTVVTV.....pGYFTL....pENSE..........   82
ident                         |                                   
Sbjct YFSDCQVLaFRSVsNNNN..HTGVDSLCNFsplarrVDRVAiyeefLRMThngtqllnft  117
DSSP  LEEEELLLeEELLlLLLL..LLEEEEEEEEllllllLLHHHhhhhhHHHLlllleellee


DSSP  ....llEEEEELLEeeeeeeeeelllllhhhhhhhhhhhllllleeelllleeeeelllh
Query ....gvILTEITGGqyavavarvvgddfakpwyqffnsllqdsayemlpkpcfevylnng  138
ident                                                             
Sbjct ldrksvFVDSGPSS..............................................  131
DSSP  llllllEEEELLLL..............................................


DSSP  hhhlleeeeeeeeeeel
Query aedgywdiemyvavqpk  155
ident                  
Sbjct .................  131
DSSP  .................


No 54: 1CVJA MOLECULE: POLYDENYLATE BINDING PROTEIN 1;

DSSP  llleeeeelleEEEEEE.EELLhhhhhHHHHHHHHHHHHHllLLLLEEEEEElLLLLlll
Query mnyeikqeekrTVAGFH.LVGPweqtvKKGFEQLMMWVDSknIVPKEWVAVYyDNPDetp   59
ident                   |                                  |      
Sbjct ...........ASLYVGdLHPD.....VTEAMLYEKFSPA..GPILSIRVCR.DMIT...   38
DSSP  ...........LEEEEElLLLL.....LLHHHHHHHHHHH..LLEEEEEEEE.LLLL...


DSSP  hhhlEEEEEEEELlLLLL....lLLLLL.........LEEEEELLE..............
Query aeklRCDTVVTVPgYFTL....pENSEG.........VILTEITGG..............   92
ident          |                                                  
Sbjct .rrsLGYAYVNFQ.QPADaeralDTMNFdvikgkpvrIMWSQRDPSlrksgvgnifiknl   96
DSSP  .lleEEEEEEEEL.LHHHhhhhhLLLLLleelleeleEEELLLLLHhhhlllleeeeell


DSSP  ..........................................eeeeeeeeelllllhhhh
Query ..........................................qyavavarvvgddfakpw  110
ident                                                             
Sbjct dksidnkalydtfsafgnilsckvvcdengskgygfvhfetqeaaeraiekmngmllndr  156
DSSP  lllllhhhhhhhhhlllleeeeeelllllllllleeeeellhhhhhhhllllleeeelle


DSSP  hhhhhhhllLLLEeelllleeeeelllhhhhlleeeeeeeeeeel
Query yqffnsllqDSAYemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                              
Sbjct kvfvgrfksRKER................................  169
DSSP  eeeeeelllLLLL................................


No 55: 3SXLA MOLECULE: PROTEIN (SEX-LETHAL);

DSSP  llleeeeellEEEE.eeeEELLHhhHHHHHHHHHHHHHhhllllllEEEEEElLLLLLLL
Query mnyeikqeekRTVA.gfhLVGPWeqTVKKGFEQLMMWVdsknivpkEWVAVYyDNPDETP   59
ident            |      |      |                                  
Sbjct ..........NTNLivnyLPQDX..TDRELYALFRAIG......piNTCRIX.RDYKTGY   41
DSSP  ..........LLEEeeelLLLLL..LHHHHHHHHHLLL......leEEEEEE.ELLLLLL


DSSP  hhhLEEEEEEEELllllllllLLLL..........EEEEEL............leeeeee
Query aekLRCDTVVTVPgyftlpenSEGV..........ILTEIT............ggqyava   97
ident         |                                                   
Sbjct ..sFGYAFVDFTSexdsqraiKVLNgitvrnkrlkVSYARPesikdtnlyvtnlprtitd   99
DSSP  ..eEEEEEEEELLhhhhhhhhHHHLlleelleeleEEELLLllllllleeeelllllllh


DSSP  eeeelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query varvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                           
Sbjct dqldtifgkygsivqknilrdkltgrprgvafvrynkreeaqeaisalnnvplsvrla  157
DSSP  hhhhhhhhhhlllleeeeeelllllleeeeeeeelllhhhhhhhhhhhllllleeeel


No 56: 2H39A MOLECULE: PROBABLE GALACTOSE-1-PHOSPHATE URIDYL

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct spelrkdpvtnrwvifsparakrptdfscpfcigreqecapelfrvpdhdpnwklrvien   60
DSSP  lleeeeelllleeeeelhhhhhlllllllllllllhhhllleeeeelllllllleeeeel


DSSP  .......llleeeeelleeeEEEEEELL.................hhHHHHHHHHHHHhH
Query .......mnyeikqeekrtvAGFHLVGP.................weQTVKKGFEQLMmW   36
ident                                                   ||   |    
Sbjct lypalsrnletqsrtivgfgFHDVVIESpvhsiqlsdidpvgigdilIAYKKRINQIA.Q  119
DSSP  lllllllllllllleeelllEEEEEELLllllllhhhllhhhhhhhhHHHHHHHHHHL.L


DSSP  HHHlllllleEEEEELL...lllLLLHhhLEEEEEEEEL.....................
Query VDSknivpkeWVAVYYD...npdETPAekLRCDTVVTVP.....................   72
ident  ||                                                         
Sbjct HDS....inyIQVFKNQgasagaSMSH..SGSQMMALPVvpptvssrldgtkdyfeetgk  173
DSSP  LLL....lleEEEEEEElhhhllLLLL..LEEEEEEELLllhhhhhhhhhhhhhhhhhll


DSSP  .........lllllllllllleeeeelLEEEEEEEEE...........eLLLL.LHHHHH
Query .........gyftlpensegvilteitGGQYAVAVAR...........vVGDD.FAKPWY  111
ident                                                  |          
Sbjct cclceakskhfvidesshfvsvapfaaTYPFEIWIIPkdhsshfhhlddVKAVdLGGLLK  233
DSSP  lllllhhhhleeeeellleeeeellllLLLLLEEEEEllllllhhhllhHHHHhHHHHHH


DSSP  HHHHHHLLLlleeeLLLLEEEeELLL.....hhhhLLEEEEEEEEEEE............
Query QFFNSLLQDsayemLPKPCFEvYLNN.....gaedGYWDIEMYVAVQP............  154
ident                |                           |                
Sbjct LMLQKIAKQ..lndPPYNYMI.HTSPlkvtesqlpYTHWFLQIVPQLSgvggfeigtgcy  290
DSSP  HHHHHHHHH..lllLLEEEEE.ELLLllllhhhhhHLLLEEEEEELLLlllhhhhhhlll


DSSP  .................l
Query .................k  155
ident                   
Sbjct inpvfpedvakvmrevsl  308
DSSP  eelllhhhhhhhhhllll


No 57: 2DR5A MOLECULE: CCA-ADDING ENZYME;

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct mkveeilekalelvipdeeevrkgreaeeelrrrldelgveyvfvgsyarntwlkgslei   60
DSSP  llhhhhhhhhhhhhlllhhhhhhhhhhhhhhhhhhhhlllleeeehhhhlllllllllle


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct dvfllfpeefskeelrergleigkavldsyeiryaehpyvhgvvkgvevdvvpcyklkep  120
DSSP  eeeeeelllllhhhhhhhhhhhhhhhlllllleellleeeeeeelleeeeeeeeellllh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct kniksavdrtpfhhkwlegrikgkenevrllkgflkangiygaeykvrgfsgylcelliv  180
DSSP  hhlllhhhhhhhhhhhhhhhllllhhhhhhhhhhhhhllllllllllllllhhhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct fygsfletvknarrwtrrtvidvakgevrkgeeffvvdpvdekrnvaanlsldnlarfvh  240
DSSP  hhllhhhhhhhhlllllleeeelllleeeelllleeeelleeeeellllllhhhhhhhhh


DSSP  ................LLLE...eEEEL.......leEEEEeEEEL..LHHHHHHHHHHH
Query ................MNYE...iKQEE.......krTVAGfHLVG..PWEQTVKKGFEQ   32
ident                                        |                    
Sbjct lcrefmeapslgffkpKHPLeiepERLRkiveergtaVFAVkFRKPdiVDDNLYPQLERA  300
DSSP  hhhhhhhlllhhhlllLLLLlllhHHHHhhhhhhlleEEEEeEELLllLHHHHHHHHHHH


DSSP  HHHHHHHLL...lLLLEEEEEELLllllllhhhLEEEEEEEELLL...............
Query LMMWVDSKN...iVPKEWVAVYYDnpdetpaekLRCDTVVTVPGY...............   74
ident               |                    |                        
Sbjct SRKIFEFLErenfMPLRSAFKASE.........EFCYLLFECQIKeisrvfrrmgpqfed  351
DSSP  HHHHHHHHHhlllLEEEEEEEELL.........LEEEEEEEELLLlllleeeeeeeelll


DSSP  .................................LLLL..LLLL................l
Query .................................FTLP..ENSE................g   83
ident                                                             
Sbjct ernvkkflsrnrafrpfiengrwwafemrkfttPEEGvrSYASthwhtlgknvgesirey  411
DSSP  hhhhhhhllllllllleeelleeeeeeelllllHHHHhhHHHHhhlllllhhhhhhhhhl


DSSP  lEEEEELleeeeeeeeeelllllhhhhhhhhhhhllllleeellLLEE..EEELllhhhh
Query vILTEITggqyavavarvvgddfakpwyqffnsllqdsayemlpKPCF..EVYLnngaed  141
ident                                             |     |         
Sbjct fEIISGE..................................klfKEPVtaELCE......  431
DSSP  lEEEELH..................................hhhLLLLhhHHHH......


DSSP  lleeeeeeeeeeel
Query gywdiemyvavqpk  155
ident               
Sbjct ........mmgvkd  437
DSSP  ........hhllll


No 58: 2DJWA MOLECULE: PROBABLE TRANSCRIPTIONAL REGULATOR, ASNC FAMILY;

DSSP  llleeeeellEEEEEEEEELlhhHHHHHHHHHHHHHhhhllLLLLEEEEEELlllllllh
Query mnyeikqeekRTVAGFHLVGpweQTVKKGFEQLMMWvdsknIVPKEWVAVYYdnpdetpa   60
ident                    |     |    |              |   |          
Sbjct ........miTAFVLIRPRG...NRVQALGEAIAEL.....PQVAEVYSVTG........   36
DSSP  ........leEEEEEEEELH...HHHHHHHHHHLLL.....LLEEEEEEELL........


DSSP  hhlEEEEEEEEL..lllLLLL...LLLL......lEEEE.elLEEEEeeeeeelllllhh
Query eklRCDTVVTVP..gyfTLPE...NSEG......vILTE.itGGQYAvavarvvgddfak  108
ident      | |  |       |                  |                      
Sbjct ...PYDLVALVRlkdveELDDvvtQGILslegverTETLlafRAYPR.............   80
DSSP  ...LLLEEEEEEellhhHHHHhhhHHHLlllleeeEEEEeeeEELLL.............


DSSP  hhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query pwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                
Sbjct ...............................................   80
DSSP  ...............................................


No 59: 2DCTA MOLECULE: HYPOTHETICAL PROTEIN TTHA0104;

DSSP  ...................lLLEEEEelleeeeeeeeellhhhhhhhhhhhhhhhhhhll
Query ...................mNYEIKQeekrtvagfhlvgpweqtvkkgfeqlmmwvdskn   41
ident                                                             
Sbjct meikdlkrlarynpekmakiPVFQSE..................................   26
DSSP  leeeelhhhlllllllleeeEEEELL..................................


DSSP  lllleeeeeellllllllhhhleeeeeeeellllllllllllleeeeelleEEEEEEEEE
Query ivpkewvavyydnpdetpaeklrcdtvvtvpgyftlpensegvilteitggQYAVAVARV  101
ident                                                             
Sbjct ...................................................RMLYDLYAL   35
DSSP  ...................................................LLEEEEEEE


DSSP  LLLLLHHhhhhhhhhhllllleeelLLLEEEEELLLH.......................
Query VGDDFAKpwyqffnsllqdsayemlPKPCFEVYLNNG.......................  138
ident       |                          |                          
Sbjct LPGQAQK.............vhvheGSDKVYYALEGEvvvrvgeeeallapgmaafapag   82
DSSP  LLLLEEE.............eelllLLEEEEEEEELLeeeeelleeeeellleeeeelll


DSSP  .......hhhLLEEEEEEEEEeel
Query .......aedGYWDIEMYVAVqpk  155
ident                    |    
Sbjct aphgvrnesaSPALLLVVTAP.rp  105
DSSP  lleeeellllLLEEEEEEEEL.ll


No 60: 1UW4A MOLECULE: UPF3X;

DSSP  llleeeeelLEEEeeeeEELLHhhHHHHHHHHhHHHHhhllLLLLEEEEEELLLlLLLLh
Query mnyeikqeeKRTVagfhLVGPWeqTVKKGFEQlMMWVdsknIVPKEWVAVYYDNpDETPa   60
ident             |    |      |     |                     |     | 
Sbjct .........LSKVvirrLPPTL..TKEQLQEH.LQPM....PEHDYFEFFSNDT.SLYP.   42
DSSP  .........LLEEeeeeELLLL..LHHHHHHH.HLLL....LLEEEEEEEELLL.LLLL.


DSSP  hHLEEEeeEEELLL.LLLLllLLLL..............eEEEELLeeeeeeeeeellll
Query eKLRCDtvVTVPGY.FTLPenSEGV..............iLTEITGgqyavavarvvgdd  105
ident                                                             
Sbjct .HMYARayINFKNQeDIILfrDRFDgyvfldnkgqeypaiVEFAPF..............   87
DSSP  .LLLEEeeEEELLLhHHHHhhHHHLlleeellllleeeleEEELLL..............


DSSP  lhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query fakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                   
Sbjct ...............................................qka   90
DSSP  ...............................................lll


No 61: 1O0PA MOLECULE: SPLICING FACTOR U2AF 65 KDA SUBUNIT;

DSSP  llleeeeelleeeEEEE..EELLH...hhhHHHHHHHHHHHHHhLLLLLLEEEEeelllL
Query mnyeikqeekrtvAGFH..LVGPW...eqtVKKGFEQLMMWVDsKNIVPKEWVAvyydnP   55
ident                                    |        |    |         |
Sbjct .......ghptevLCLMnmVLPEEllddeeYEEIVEDVRDECS.KYGLVKSIEI...prP   49
DSSP  .......llllleEEEEllLLLLLlllhhhHHHHHHHHHHHHL.LLLLEEEEEL...llL


DSSP  LLLlhhhlEEEEEEEELLL..LLLL.LLLL.........llEEEEELLeeeeeeeeeell
Query DETpaeklRCDTVVTVPGY..FTLP.ENSE.........gvILTEITGgqyavavarvvg  103
ident              |                                              
Sbjct VDGvevpgCGKIFVEFTSVfdCQKAmQGLTgrkfanrvvvtKYCDPDS............   97
DSSP  LLLlllllLLEEEEEELLHhhHHHHhHHHLllllllllleeEEELHHH............


DSSP  lllhhhhhhhhhhhllllleeellLLEEeeelllhhhhlleeeeeeeeeeel
Query ddfakpwyqffnsllqdsayemlpKPCFevylnngaedgywdiemyvavqpk  155
ident                                                     
Sbjct .....................yhrRDFW........................  104
DSSP  .....................hhhLLLL........................


No 62: 2Q43A MOLECULE: IAA-AMINO ACID HYDROLASE ILR1-LIKE 2;

DSSP  .......llleeeeelleeeeeeeeellhhhhhhhhhhhhhhhhhhlllllleeeeeell
Query .......mnyeikqeekrtvagfhlvgpweqtvkkgfeqlmmwvdsknivpkewvavyyd   53
ident                                                             
Sbjct kllefakspevfdwmvkirrkihenpelgyeeletsklirseleligikyrypvaitgvi   60
DSSP  llhhhhhlhhhhhhhhhhhhhhhhllllllllhhhhhhhhhhhhhhlleeeeeellleee


DSSP  llllllhhhleeeeeeeelLLLLLLLL.................................
Query npdetpaeklrcdtvvtvpGYFTLPEN.................................   80
ident                                                             
Sbjct gyigtgeppfvalradmdaLPIQEGVEwehkskiagkmhacghdghvtmllgaakilheh  120
DSSP  eeeellllleeeeeeelllLLLLLLLLlllllllllllllllhhhhhhhhhhhhhhhhhl


DSSP  ..................................................lllleeeeel
Query ..................................................segvilteit   90
ident                                                             
Sbjct rhhlqgtvvlifqpaeeglsgakkmreegalknveaifgihlsaripfgkaasragsfla  180
DSSP  hhhllleeeeeeelllllllhhhhhhhlllllleeeeeeeeeeeeeellleeelleeeel


DSSP  lEEEEEEEEEELLLLLHHHHHHHHHHHLLLL.........LEEEllllEEEEelllhhhh
Query gGQYAVAVARVVGDDFAKPWYQFFNSLLQDS.........AYEMlpkpCFEVylnngaed  141
ident       ||      |          || |                               
Sbjct gAGVFEAVITGKTIDPVVAASSIVLSLQQLVsretdpldsKVVT...vSKVN........  229
DSSP  lLEEEEEEEEELLLHHHHHHHHHHHHHHHHLlllllllllEEEE...eEEEL........


DSSP  llEEEEEEEEEEE...............................................
Query gyWDIEMYVAVQP...............................................  154
ident     |                                                       
Sbjct .pDSITIGGTLRAftgftqlqqrvkevitkqaavhrcnasvnltpngrepmpptvnnkdl  288
DSSP  .lLEEEEEEEEEElllhhhhhhhhhhhhhhhhhllleeeeeellhhhlllllleeelhhh


DSSP  ............................................................
Query ............................................................  154
ident                                                             
Sbjct ykqfkkvvrdllgqeafveaapvmgsedfsyfaetipghfsllgmqdetngyasshsply  348
DSSP  hhhhhhhhhhhlllllleellllllllllhhhhlllleeeeeeeeellllllllllllll


DSSP  ..........................l
Query ..........................k  155
ident                            
Sbjct rinedvlpygaaihasmavqylkekas  375
DSSP  lllhhhhhhhhhhhhhhhhhhhhhhll


No 63: 2NLWA MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 3

DSSP  ....llleeeeelleEEEEE.eEELL....HHHHHHHHHHHHHHhhhhlllllLEEEEEE
Query ....mnyeikqeekrTVAGF.hLVGP....WEQTVKKGFEQLMMwvdsknivpKEWVAVY   51
ident                 |              |                            
Sbjct gdvlkdrpqeadgidSVIVVdnVPQVgpdrLEKLKNVIHKIFSK.....fgkiTNDFYPE   55
DSSP  lllllllllllllllLEEEEelLLLLllllLLHHHHHHHHHHHH.....hlleEEEELLL


DSSP  LLLLllllhhhLEEEeEEEELLLL...LLLLLLLL..........LEEEeelleeeeeee
Query YDNPdetpaekLRCDtVVTVPGYF...TLPENSEG..........VILTeitggqyavav   98
ident  |                             |  |          | |            
Sbjct EDGK.......TKGYiFLEYASPAhavDAVKNADGykldkqhtfrVNLF...........   97
DSSP  LLLL.......LLLEeEEEELLLLhhhHHHHHLLLeellllleeeEELL...........


DSSP  eeelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeeeeeeeeel
Query arvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiemyvavqpk  155
ident                                                          
Sbjct .................................................tdfdkymt  105
DSSP  .................................................llllllll


No 64: 2IFAA MOLECULE: HYPOTHETICAL PROTEIN SMU.260;

DSSP  ..............................................lLLEEEE......E
Query ..............................................mNYEIKQ......E    8
ident                                                             
Sbjct snfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsRALVLFgqdsqdF   60
DSSP  llhhhhhhhlllllleellllllhhhhhhhhhhhhhllllhhhllleEEEEEEhhhhhhH


DSSP  LLEeeeeeeeellhhhhhhhhhhhhhhhhhhlllllleeeeeellllllllhhhleeeee
Query EKRtvagfhlvgpweqtvkkgfeqlmmwvdsknivpkewvavyydnpdetpaeklrcdtv   68
ident                                                             
Sbjct WNK.....................................................iays   67
DSSP  HHL.....................................................hhhh


DSSP  EEELllllllllllllEEEE....ELLE....EEEEEEEE................eLLL
Query VTVPgyftlpensegvILTE....ITGG....QYAVAVAR................vVGD  104
ident                                                             
Sbjct ELEK.......vtpaeAFAGtkakLESFaagvGTILLFEDqavvrnleenfplyaenFQP  120
DSSP  HHHL.......lllhhHHHHhhhhHHHHhlllEEEEEEEEhhhhhhhhhhllllhhhHHH


DSSP  L.LHHHHHHHHHHHLLL..LLEEELlllEEEEE......lllhhhhlleEEEEEEEEEEL
Query D.FAKPWYQFFNSLLQD..SAYEMLpkpCFEVY......lnngaedgywDIEMYVAVQPK  155
ident               |                                             
Sbjct WsEQAHGIALYAIWLALaeQNIGXS..vQHYNPlvdaqvaekydlptnwKXRAQIPFGSI  178
DSSP  HhHHHHHHHHHHHHHHHhhLLEEEL..lLLLLLllhhhhhhhlllllleEEEEEEEEEEE


DSSP  ......................
Query ......................  155
ident                       
Sbjct eapagekefxadqerfkvfgdl  200
DSSP  lllllllllllhhhleeeelll


No 65: 2GHPA MOLECULE: U4/U6 SNRNA-ASSOCIATED SPLICING FACTOR PRP24;

DSSP  llleeeeelleEEEEEE.EELLHhhHHHHHHHHhHHHHhhllLLLLEEEEEELLLLllll
Query mnyeikqeekrTVAGFH.LVGPWeqTVKKGFEQlMMWVdsknIVPKEWVAVYYDNPdetp   59
ident            |      |         |                               
Sbjct ...........TTVLVKnLPKSY..NQNKVYKY.FKHC....GPIIHVDVADSLKK....   38
DSSP  ...........LEEEEEeELLLL..LHHHHHHH.HHHH....LLEEEEEEEELLLL....


DSSP  hhhLEEEEEEEELlLLLL.lllLLLL..........EEEE.eLLEEeeeeeeeelllllh
Query aekLRCDTVVTVPgYFTL.penSEGV..........ILTE.iTGGQyavavarvvgddfa  107
ident                                                             
Sbjct ...NFRFARIEFA.RYDGalaaITKThkvvgqneiiVSHLteCTLW..............   80
DSSP  ...LLEEEEEEEL.LHHHhhhhHLLLlleelleeleEEELllLEEE..............


DSSP  hhhhhhhhhhlLLLLE.........eELLLLEEE..........................
Query kpwyqffnsllQDSAY.........eMLPKPCFE..........................  132
ident                |                                            
Sbjct ........xtnFPPSYtqrnirdllqDINVVALSirlprrfayidvtskedarycvekln  132
DSSP  ........eelLLLLLlhhhhhhhhhHLLLLLLEeelllleeeeelllhhhhhhhhhhhl


DSSP  ............................................................
Query ............................................................  132
ident                                                             
Sbjct glkiegytlvtkvsnpltlegreixirnlstelldenllresfegfgsiekinipagqkf  192
DSSP  lleelleeleeeellllllllleeeeeeellllllhhhhhhhhhhhlleeeeelllllll


DSSP  .................eelllhhhhlleeeeeeeeeeel
Query .................vylnngaedgywdiemyvavqpk  155
ident                                         
Sbjct nnccafxvfenkdsaeralqxnrsllgnreisvsladkkp  232
DSSP  lleeeeeeellhhhhhhhhhhlleeelleeeeeeelllll


No 66: 2F06A MOLECULE: CONSERVED HYPOTHETICAL PROTEIN;

DSSP  llleeeeELLEEEEeEEEELLhHHHHHHHHHHHHHHHhhllLLLLEEEEEELLllllllh
Query mnyeikqEEKRTVAgFHLVGPwEQTVKKGFEQLMMWVdsknIVPKEWVAVYYDnpdetpa   60
ident                  |            | |        |                  
Sbjct ....snaXVAKQLS.IFLENK.SGRLTEVTEVLAKEN....INLSALCIAENA.......   43
DSSP  ....lllLEEEEEE.EEELLL.LLHHHHHHHHHHHLL....LLEEEEEEEELL.......


DSSP  hhLEEEEEEEElllllllllLLLL......EEEEELLeeeeeeeeeelllllhhhhhhhh
Query ekLRCDTVVTVpgyftlpenSEGV......ILTEITGgqyavavarvvgddfakpwyqff  114
ident           |                                                 
Sbjct ..DFGILRGIV...sdpdkaYKALkdnhfaVNITDVV..........giscpnvpgalak   88
DSSP  ..LLEEEEEEE...llhhhhHHHHhhllllEEEEEEE..........eeeeellllhhhh


DSSP  hhhllLLLEeelllleeeeELLL...................hhhhlleeeeeeeeeeel
Query nsllqDSAYemlpkpcfevYLNN...................gaedgywdiemyvavqpk  155
ident                    |                                        
Sbjct vlgflSAEG....vfieyxYSFAnnnvanvvirpsnxdkcievlkekkvdllaasdlykl  144
DSSP  hhhhhHHLL....lleeeeEEEEelleeeeeeeellhhhhhhhhhhllleeelhhhhlll


No 67: 1YLXA MOLECULE: HYPOTHETICAL PROTEIN APC35702;

DSSP  llleeeeelleeeeeeeeelLHHHHHHHHHHHHHHHHHHLLLLLleEEEEELLLlLLLLh
Query mnyeikqeekrtvagfhlvgPWEQTVKKGFEQLMMWVDSKNIVPkeWVAVYYDNpDETPa   60
ident                     |           |                           
Sbjct ................xefaPRSVVIEEFIDTLEPXXEAYGLDQ..VGIFEEHG.EGNR.   40
DSSP  ................llllLHHHHHHHHHHHHHHHHHHHLLLL..EEEEEEEL.LLLE.


DSSP  hhLEEEEEEEELL................................lllllllLLLLeeee
Query ekLRCDTVVTVPG................................yftlpenSEGVilte   88
ident                                                      |      
Sbjct ..YYVGYTINKDDexitihxpfvknergelalekqewtvrkdgrekkgfhslQEAX....   94
DSSP  ..EEEEEEEEELLeeeeeeeeeeellllleeelllleeeeelleeeeeellhHHHH....


DSSP  elleeeeeeeeeelllllhhhhhhhhhhhllllleeelllleeeeelllhhhhlleeeee
Query itggqyavavarvvgddfakpwyqffnsllqdsayemlpkpcfevylnngaedgywdiem  148
ident                                                             
Sbjct ............................................................   94
DSSP  ............................................................


DSSP  eeeeeel
Query yvavqpk  155
ident        
Sbjct .eevihs  100
DSSP  .hhhhll