DaliLite: Structural Neighbours

Query: 1HQZ1 MOLECULE: ACTIN-BINDING PROTEIN;

The output is truncated at max 100 structural neighbours. Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Summary

Notation:
Chain: PDB entry code plus chain identifier
Z: normalized Z-score that depends on the size of the structures. The program optimises a weighted sum of similarities of intramolecular distances.
rmsd: root-mean-square deviation of C-alpha atoms in the least-squares superimposition of the structurally equivalent C-alpha atoms. The program does not optimise rmsd, this is only reported for your information.
lali: number of structurally equivalent residues
nres: number of amino acids in the protein
%id: percentage of identical amino acids over all structurally equivalent residues
Description: the COMPND record from the PDB entry
  No:  Chain   Z    rmsd lali nres  %id  Description
   1:  1HQZ-1 31.4  0.0  139   139  100   ACTIN-BINDING PROTEIN;                                     "         
   2:  1X67-A 19.2  2.0  134   146   20   DREBRIN-LIKE PROTEIN;                                      "         
   3:  1CFY-A 16.2  2.1  126   133   19   COFILIN;                                                   "         
   4:  1VKK-A 15.1  2.3  129   137   12   GLIA MATURATION FACTOR GAMMA;                              "         
   5:  1TMW-A 14.8  2.5  130   141   16   COACTOSIN-LIKE PROTEIN;                                    "         
   6:  1M4J-A 13.2  2.3  116   133   19   A6 GENE PRODUCT;                                           "         
   7:  1F7S-A 13.2  2.2  112   124   17   ACTIN DEPOLYMERIZING FACTOR (ADF);                         "         
   8:  2D8B-A 11.6  3.0  129   166   11   TWINFILIN-1;                                               "         
   9:  1AK6-A 11.5  2.6  132   174   20   DESTRIN;                                                   "         
  10:  2FGH-A  6.0  3.8  103   721   10   GELSOLIN;                                                  "         
  11:  1SVQ-A  4.4  3.7   78    94    8   SEVERIN;                                                   "         
  12:  2NUP-A  4.3  3.1   78   699    6   PROTEIN TRANSPORT PROTEIN SEC23A;                          "         
  13:  2BVF-A  3.4  3.5   90   453    6   6-HYDROXY-D-NICOTINE OXIDASE;                              "         
  14:  1B49-A  3.0  3.5   81   241   12   PROTEIN (DEOXYCYTIDYLATE HYDROXYMETHYLASE);                "         
  15:  1H65-A  2.8  4.1   80   257   11   CHLOROPLAST OUTER ENVELOPE PROTEIN OEP34;                  "         
  16:  2GIA-B  2.7  4.4   58   146    3   MITOCHONDRIAL RNA-BINDING PROTEIN 2;                       "         
  17:  2CZR-A  2.7  5.4   70   226   13   TBP-INTERACTING PROTEIN;                                   "         
  18:  2AS0-A  2.7  4.4   79   396    9   HYPOTHETICAL PROTEIN PH1915;                               "         
  19:  1OB8-A  2.7  3.0   66   119   11   HOLLIDAY-JUNCTION RESOLVASE;                               "         
  20:  1MJH-A  2.6  3.7   70   143    6   PROTEIN (ATP-BINDING DOMAIN OF PROTEIN MJ0577);            "         
  21:  2A67-A  2.5  3.2   64   166    6   ISOCHORISMATASE FAMILY PROTEIN;                            "         
  22:  1OD2-A  2.3  3.5   95   719   12   ACETYL-COENZYME A CARBOXYLASE;                             "         
  23:  1HH1-A  2.3  3.2   67   125   10   HOLLIDAY JUNCTION RESOLVING ENZYME HJC;                    "         
  24:  2HPU-A  2.2  3.3   58   126    9   NOSL PROTEIN;                                              "         
  25:  2H1X-A  2.2  3.8   61   113   11   5-HYDROXYISOURATE HYDROLASE (FORMERLY KNOWN AS             "         
  26:  1RJM-A  2.1  3.2   68   239   10   MENB;                                                      "         
  27:  1R5B-A  2.1  3.6   74   409    3   EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP-               "         
  28:  1VHX-A  2.0  3.5   61   140    8   PUTATIVE HOLLIDAY JUNCTION RESOLVASE;                      "         
  29:  1BO7-A  2.0  3.4   78   316   18   PROTEIN (THYMIDYLATE SYNTHASE);                            "         
-

No 1: 1HQZ1  MOLECULE: ACTIN-BINDING PROTEIN;                                     

DSSP  LLLLLLLLLHHHHHHHHHHHHHLLLLLLLEEEEEELLLLLEEEEEEELLHHHHHLLLLLL
Query LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDET   60
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDET   60
DSSP  LLLLLLLLLHHHHHHHHHHHHHLLLLLLLEEEEEELLLLLEEEEEEELLHHHHHLLLLLL


DSSP  LLEEEEEEELLLLLLLLEEEEEEELLLLLLHHHHHHHHHHHHHHHHHLLLLLLEEEEELL
Query KVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARD  120
ident ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct KVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARD  120
DSSP  LLEEEEEEELLLLLLLLEEEEEEELLLLLLHHHHHHHHHHHHHHHHHLLLLLLEEEEELL


DSSP  HHHHLHHHHHHHHHLLLLL
Query EDDLDENELLMKISNAAGA  139
ident |||||||||||||||||||
Sbjct EDDLDENELLMKISNAAGA  139
DSSP  HHHHLHHHHHHHHHLLLLL


No 2: 1X67A  MOLECULE: DREBRIN-LIKE PROTEIN;                                      

DSSP  ......LLLLLLLLLHHHHHHHHHHHHHLLLlLLLEEEEEELL.LLLEEEEEEEL.LHHH
Query ......LEPIDYTTHSREIDAEYLKIVRGSDpDTTWLIISPNA.KKEYEPESTGS.SFHD   52
ident                       |   |      | |                ||      
Sbjct gssgssGMAANLSRNGPALQEAYVRVVTEKS.PTDWALFTYEGnSNDIRVAGTGEgGLEE   59
DSSP  llllllLLLLLLLLLHHHHHHHHHHHHLLLL.LLLEEEEEELLlLLLEEEEEEELlLHHH


DSSP  HHLLLLLLLLEEEEEEELLLLLLLLEEEEEEELLLLLLHHHHHHHHHHHHHHHHhLLLLL
Query FLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANnLFKGY  112
ident         || |   ||  | |   |   | |             |      |    || 
Sbjct MVEELNSGKVMYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMAS.FLKGA  118
DSSP  HHHHLLLLLEEEEEEEEELLLLLLEEEEEEEEELLLLLHHHHHHHHHHHHHHHH.HLLLE


DSSP  LEEEEELLHHHHLHHHHHHHHHLL.lll
Query HVQVTARDEDDLDENELLMKISNA.aga  139
ident ||   || | |        |        
Sbjct HVTINARAEEDVEPECIMEKVASGpssg  146
DSSP  EEEELLLLHHHHLHHHHHHHHHLLllll


No 3: 1CFYA  MOLECULE: COFILIN;                                                   

DSSP  lllLLLLllhHHHHHHHHHHHHLLLllLLEEEEEELLLL.LEEEEEEELL..HHHHHLLL
Query lepIDYTthsREIDAEYLKIVRGSDpdTTWLIISPNAKK.EYEPESTGSS..FHDFLQLF   57
ident            |          |            |  | |     |        ||   
Sbjct ...VAVA...DESLTAFNDLKLGKK..YKFILFGLNDAKtEIVVKETSTDpsYDAFLEKL   52
DSSP  ...LEEL...HHHHHHHHHHHHHLL..LLEEEEEELLLLlEEEEEEEELLllHHHHHLLL


DSSP  LLLLLEEEEEEELLLL....LLLLEEEEEEELLLLLLHHHHHHHHHHHHHHHhHLLLLLL
Query DETKVQYGLARVSPPG....SDVEKIIIIGWCPDSAPLKTRASFAANFAAVAnNLFKGYH  113
ident  |    |                 ||    | || ||       |    |       |  
Sbjct PENDCLYAIYDFEYEIngneGKRSKIVFFTWSPDTAPVRSKMVYASSKDALR.RALNGVS  111
DSSP  LLLLLEEEEEEEEEELllllLEEEEEEEEEELLLLLLHHHHHHHHHHHHHHH.HHLLLLL


DSSP  EEEEELLHHHHLHHHHHHHHHLllll
Query VQVTARDEDDLDENELLMKISNaaga  139
ident   |   |         |   |     
Sbjct TDVQGTDFSEVSYDSVLERVSR....  133
DSSP  EEEEELLHHHHLHHHHHHHHHL....


No 4: 1VKKA  MOLECULE: GLIA MATURATION FACTOR GAMMA;                              

DSSP  lLLLLLlllHHHHHHHHHHHHHLLLLllLEEEEEELLLL.LEEEEEEELLHH..HHHLLL
Query lEPIDYtthSREIDAEYLKIVRGSDPdtTWLIISPNAKK.EYEPESTGSSFH..DFLQLF   57
ident            |      |            |            |               
Sbjct .VVCEV...DPELKETLRKFRFRKETnnAAIIMKVDKDRqMVVLEDELQNISpeELKLEL   56
DSSP  .LLLEE...LHHHHHHHHHHHLLLLLllEEEEEEEELLLlEEEEEEEEELLLhhHHHHHL


DSSP  LLLLLEEEEEEELLLL...LLLLEEEEEEELLLLLLHHHHHHHHHHHHHHHhHLLLLLlE
Query DETKVQYGLARVSPPG...SDVEKIIIIGWCPDSAPLKTRASFAANFAAVAnNLFKGYhV  114
ident  |                         |   |           |                
Sbjct PERQPRFVVYSYKYVHddgRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLV.QTAELT.K  114
DSSP  LLLLLEEEEEELLEELlllLEELLEEEEEELLLLLLHHHHHHHHHHHHHHH.HHLLLL.L


DSSP  EEEELLHHHHLHHHHHHHHHLLLll
Query QVTARDEDDLDENELLMKISNAAga  139
ident     |  ||| |  |  |       
Sbjct VFEIRTTDDLTETWLKEKLAFFR..  137
DSSP  EEEELLHHHLLHHHHHHHHHLLL..


No 5: 1TMWA  MOLECULE: COACTOSIN-LIKE PROTEIN;                                    

DSSP  llLLLLllLHHHHHHHHHHHhHLLLLLLLEEEEEELlLLLEEEEEEELLHHHHHLLLLLL
Query lePIDYttHSREIDAEYLKIvRGSDPDTTWLIISPNaKKEYEPESTGSSFHDFLQLFDET   60
ident               | |    |       |            |   |     | |     
Sbjct ..ATKI..DKEACRAAYNLV.RDDGSAVIWVTFKYD.GSTIVPGEQGAEYQHFIQQCTDD   54
DSSP  ..LLLL..LHHHHHHHHHHH.HLLLLLLLEEEEEEL.LLLEEEEEEELLLHHHHHHLLLL


DSSP  LLEEEEEEELLLL..LLLLEEEEEEELLLLLLHHHHHHHHHHHHHHHhHLLLLLLEEEEE
Query KVQYGLARVSPPG..SDVEKIIIIGWCPDSAPLKTRASFAANFAAVAnNLFKGYHVQVTA  118
ident        |       |   |   | |         ||        |              
Sbjct VRLFAFVRFTTGDamSKRSKFALITWIGENVSGLQRAKTGTDKTLVK.EVVQNFAKEFVI  113
DSSP  LEEEEEEEEELLLllLLLEEEEEEEEELLLLLHHHHHHHHHHHHHHH.HHLLLLLEEEEE


DSSP  LLHHHHLHHHHHHHHHLLL.......ll
Query RDEDDLDENELLMKISNAA.......ga  139
ident  |   | ||        |          
Sbjct SDRKELEENFIKSELKKAGganydaqte  141
DSSP  LLHHHHLHHHHHHHHHHLLlllllllll


No 6: 1M4JA  MOLECULE: A6 GENE PRODUCT;                                           

DSSP  lllLLLLllhHHHHHHHHHHHHLLlllLLEEEEEELlLLLEEEEEEEL.......LHHHH
Query lepIDYTthsREIDAEYLKIVRGSdpdTTWLIISPNaKKEYEPESTGS.......SFHDF   53
ident    |                  |       | ||          |              |
Sbjct ...IQAS...EDVKEIFARARNGK...YRLLKISIE.NEQLVVGSCSPpsdsweqDYDSF   50
DSSP  ...LLLL...HHHHHHHHHHHLLL...LLEEEEEEL.LLLEEEEEEELllllhhhHHHHH


DSSP  HL.LLLLLLLEEEEEEELllllllLEEEEEEELLLLLLHHHHHHHHHHHHHHHhHLLL..
Query LQ.LFDETKVQYGLARVSppgsdvEKIIIIGWCPDSAPLKTRASFAANFAAVAnNLFK..  110
ident    |       | | |           | | | ||          ||  |      |   
Sbjct VLpLLEDKQPCYVLFRLDsqnaqgYEWIFIAWSPDHSHVRQKMLYAATRATLK.KEFGgg  109
DSSP  HHhHLLLLLLEEEEEEEEeeelleEEEEEEEELLLLLLHHHHHHHHHHHHHHH.HHHLhh


DSSP  LLLEEEEELLHHHHLHHHHHHHHhlllll
Query GYHVQVTARDEDDLDENELLMKIsnaaga  139
ident      |      |                
Sbjct HIKDEVFGTVKEDVSLHGYKKYL.....l  133
DSSP  HEEEEEEELLHHHHLHHHHHHHH.....l


No 7: 1F7SA  MOLECULE: ACTIN DEPOLYMERIZING FACTOR (ADF);                         

DSSP  llLLLLlllHHHHHHHHHHHHHLLLllLLEEEEEEL.LLLLEEEEEEEL...LHHHHHLL
Query lePIDYtthSREIDAEYLKIVRGSDpdTTWLIISPN.AKKEYEPESTGS...SFHDFLQL   56
ident                  |                     |    |  |        |   
Sbjct asGMAV...HDDCKLRFLELKAKRT..HRFIVYKIEeKQKQVVVEKVGQpiqTYEEFAAC   55
DSSP  llLLEE...LHHHHHHHHHHHHHLL..LLEEEEEEElLLLEEEEEEELLlllLHHHHHLL


DSSP  LLLLLLEEEEEEELLLL...LLLLEEEEEEELLLLLLHHHHHHHHHHHHHHHhHLLLLLL
Query FDETKVQYGLARVSPPG...SDVEKIIIIGWCPDSAPLKTRASFAANFAAVAnNLFKGYH  113
ident        |                ||  | |||| |        |            |  
Sbjct LPADECRYAIYDFDFVTaenCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFK.RELDGIQ  114
DSSP  LLLLLLEEEEEEEEEELlllLEEEEEEEEEELLLLLLHHHHHHHHHHHHHHH.LLLLLLL


DSSP  EEEEELLhhhhlhhhhhhhhhlllll
Query VQVTARDeddldenellmkisnaaga  139
ident |   | |                   
Sbjct VELQATD................pte  124
DSSP  EEEEELL................lll


No 8: 2D8BA  MOLECULE: TWINFILIN-1;                                               

DSSP  ......................LLLLLLLllHHHHHHHHHHHHHLLlllLLEEEEEELLL
Query ......................LEPIDYTthSREIDAEYLKIVRGSdpdTTWLIISPNAK   38
ident                                ||       |                  |
Sbjct gssgssgevqtdvsvdtkhqtlQGVAFPI..SRDAFQALEKLSKKQ...LNYVQLEIDIK   55
DSSP  llllllllllllllllllllllLLLLLLL..LHHHHHHHHHHHLLL...LLLLEEEEELL


DSSP  .LLEEEEEEELLHH.HHHLLLLLLLLEEEEEEELLLL..LLLLEEEEEEELLLLLL.HHH
Query .KEYEPESTGSSFH.DFLQLFDETKVQYGLARVSPPG..SDVEKIIIIGWCPDSAP.LKT   93
ident         |      |           |              |    |   |        
Sbjct nETIILANTENTELrDLPKRIPKDSARYHFFLYKHSHegDYLESVVFIYSMPGYTCsIRE  115
DSSP  lLEEEEEELLLLLLlLHHHHLLLLLLEEEEEEEEEEEllEEEEEEEEEEELLLLLLlHHH


DSSP  HHHHHHHHHHHHhHLLL.....LLLEEEEELLHHHHLHHHHHHHHHL.llll
Query RASFAANFAAVAnNLFK.....GYHVQVTARDEDDLDENELLMKISN.aaga  139
ident |                                | |    |           
Sbjct RMLYSSCKSPLL.EIVErqlqmDVIRKIEIDNGDELTADFLYDEVHSgpssg  166
DSSP  HHHHHHLLHHHH.HHHLlllllLLLEEEEELLLLLLLHHHHHHHHHLlllll


No 9: 1AK6A  MOLECULE: DESTRIN;                                                   

DSSP  ..........LLLLLLlllHHHHHHHHHHHHHLL.......LLLLLEEEEEELLLLL.EE
Query ..........LEPIDYtthSREIDAEYLKIVRGS.......DPDTTWLIISPNAKKE.YE   42
ident                      |                          |    | |    
Sbjct tmitpssgnsASGVQV...ADEVCRIFYDMKVRKcstpeeiKKRKKAVIFCLSADKKcII   57
DSSP  llllllllllLLLLLL...LLHHHHHHHHLLLLLlllhhhhHHHLLLEELLLLLLLLlLL


DSSP  EE..EEELL..........HHHHHLLLLLLLLEEEEEEELLLL..LLLLEEEEEEELLLL
Query PE..STGSS..........FHDFLQLFDETKVQYGLARVSPPG..SDVEKIIIIGWCPDS   88
ident  |                 |  |     |    | |   |     |  |      | |  
Sbjct VEegKEILVgdvgvtitdpFKHFVGMLPEKDCRYALYDASFETkeSRKEELMFFLWAPEL  117
DSSP  LLllLLLLLllllllllllLHHHHHLLLLLLLLLEELLLLLLLllLLLLLLLEEEELLLL


DSSP  LLHHHHHHHHHHHHHHHhHLLLLLLEEEEELLHHHHLHHHHHHHHHLL.......lll
Query APLKTRASFAANFAAVAnNLFKGYHVQVTARDEDDLDENELLMKISNA.......aga  139
ident ||||     |    |     | |      |    ||       |              
Sbjct APLKSKMIYASSKDAIK.KKFQGIKHECQANGPEDLNRACIAEKLGGSlivafegcpv  174
DSSP  LLHHHHHLHHHHHHHHH.HHLLLLLLLEEELLLLLLLHHHHHHHLLLLllllllllll


No 10: 2FGHA  MOLECULE: GELSOLIN;                                                  

DSSP  lllllllllHHHHHHHHhhHHHLlllllLEEEEEELLlLLEEEEEEellhhhhhLLLLLL
Query lepidytthSREIDAEYlkIVRGsdpdtTWLIISPNAkKEYEPESTgssfhdflQLFDET   60
ident                                |          |             |   
Sbjct ........vEHPEFLKA..GKEP.....GLQIWRVEK.FDLVPVPP.....nlyGDFFTG   39
DSSP  ........lLLHHHHHL..LLLL.....EEEEEEELL.LLEEELLH.....hhlLEEELL


DSSP  LLEEEEEEELLLlLLLLEEEEEEELLLLLLHHHHHHHHHHHHHHHHHlLLLLLEEEEELL
Query KVQYGLARVSPPgSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNlFKGYHVQVTARD  120
ident      |  |              |             |            |  ||     
Sbjct DAYVILKTVQLR.NGILQYDLHYWLGNECSQDESGAAAIFTVQLDDY.LNGRAVQHREVQ   97
DSSP  LEEEEEEEEELL.LLLEEEEEEEEELLLLLHHHHHHHHHHHHHHHHH.LLLLLEEEEEEL


DSSP  HHHHLH......................................................
Query EDDLDE......................................................  126
ident                                                             
Sbjct GFESATflgyfksglkykkggvasgfkhvvpnevvvqrllqvkgrrvvratevpvswesf  157
DSSP  LLLLHHhhhllllleeeellllllllllllllllllleeeeeellllleeeeelllhhhl


DSSP  ............................................................
Query ............................................................  126
ident                                                             
Sbjct nngdcfildlgnniyqwcgsksnrferlkatqvskgirdnersgraqvsvfeegaepeam  217
DSSP  lllleeeeellleeeeeelllllhhhhhhhhhhhhhhhhhlhhhlleeeeeelllllhhh


DSSP  ............................................................
Query ............................................................  126
ident                                                             
Sbjct lqvlgpkptlpeatenrklaklykvsngagpmvvslvadenpfaqgalrsedcfildhgk  277
DSSP  hhhhlllllllllllllllleeeeelllllllleeeeellllllhhhllllleeeeeehh


DSSP  ....................................hhhhhhhhLLLL............
Query ....................................nellmkisNAAG............  138
ident                                                             
Sbjct dgkifvwkgkqanmeerkaalktasdfiskmdypkqtqvsvlpeGGETplfrqffknwrd  337
DSSP  hleeeeeelllllhhhhllhhhhhhhhhhhhlllllleeeeeelLLLLhhhhllllllll


DSSP  ............................................................
Query ............................................................  138
ident                                                             
Sbjct pdqteglglaylsshiahvervpfdaatlhtstamaaqhgmdddgtgqkqiwrvegsnkv  397
DSSP  hhhhlllllllllhhhlllllllllhhhhhhlhhhhhhhllllllllleeeeeeelleee


DSSP  ............................................................
Query ............................................................  138
ident                                                             
Sbjct pvdpatygqfyggdsyiilynyrhgsrqgqiiynwqgaqstqdevaasailtaqldeelg  457
DSSP  ellhhhlleeellleeeeeeeeelllleeeeeeeeelllllhhhhhhhhhhhhhhhhhll


DSSP  ............................................................
Query ............................................................  138
ident                                                             
Sbjct gtpvqsrvvqgkepahlmslfggkpmivykggtsreggqtapastrlfqvrasssgatra  517
DSSP  llleeeeeelllllhhhhllllllleeeelllllllllllllllleeeeeeellllleee


DSSP  ............................................................
Query ............................................................  138
ident                                                             
Sbjct veiipkagalnsndafvlktpsaaylwvgagaseaektgaqellrvlraqpvqvaegsep  577
DSSP  eeelllhhhllllleeeeelllleeeeelllllhhhhhhhhhhhhhlllllleeelllll


DSSP  ............................................................
Query ............................................................  138
ident                                                             
Sbjct dsfwealggkatyrtsprlkdkkmdahpprlfacsnkigrfvieevpgefmqedlatddv  637
DSSP  hhhhhhllllllllllllllllhhhhllleeeeeeelllleeeeeelllllhhhllllle


DSSP  ............................................................
Query ............................................................  138
ident                                                             
Sbjct mlldtwdqvfvwvgkdsqdeektealtsakryidtdpahrdrrtpitvvkqgfeppsfvg  697
DSSP  eeeelllleeeeelllllhhhhhlhhhhhhhhhhhlllllllllleeeeelllllhhhhl


DSSP  .......................l
Query .......................a  139
ident                         
Sbjct wflgwddsywsvdpldralaelaa  721
DSSP  llllllllhhhllhhhhhhhhhll


No 11: 1SVQA  MOLECULE: SEVERIN;                                                   

DSSP  lllllllllhhhhhhhhhhhhhllllLLLEEEEE..elLLLLEEEEEEellhhhhHLLLL
Query lepidytthsreidaeylkivrgsdpDTTWLIIS..pnAKKEYEPESTgssfhdfLQLFD   58
ident                                                             
Sbjct ..........................EYKPRLLHisgdKNAKVAEVPL......aTSSLN   28
DSSP  ..........................LLLEEEEEeellLLLEEEEELL......lLLLLL


DSSP  LLLLEEEEEEelllllllleEEEEEELLLLLLHHHHHHHHHHHHHHHHHLlLLLLeEEEE
Query ETKVQYGLARvsppgsdvekIIIIGWCPDSAPLKTRASFAANFAAVANNLfKGYHvQVTA  118
ident         |             |                |    |               
Sbjct SGDCFLLDAG..........LTIYQFNGSKSSPQEKNKAAEVARAIDAERkGLPK.VEVF   77
DSSP  LLLEEEEEEL..........LEEEELLLLLLLHHHHHHHHHHHHHHHHHHlLLLE.EEEL


DSSP  L..lHHHHLHhhhhhhhhlllll
Query R..dEDDLDEnellmkisnaaga  139
ident      |   |             
Sbjct CetdSDIPAE......fwkllgg   94
DSSP  LlllLLLLHH......hhhhhll


No 12: 2NUPA  MOLECULE: PROTEIN TRANSPORT PROTEIN SEC23A;                          

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct tylefiqqneerdgvrfswnvwpssrleatrmvvpvaalftplkerpdlppiqyepvlcs   60
DSSP  lhhhhhhhhhhhhleeellleelllhhhhllllllleeeellllllllllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct rttcravlnplcqvdyraklwacnfcyqrnqfppsyagiselnqpaellpqfssieyvvl  120
DSSP  lllllllllllleeelllleeelllllleeellhhhlllllllllhhhlhhhlleeeeel


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct rgpqmpliflyvvdtcmededlqalkesmqmslsllpptalvglitfgrmvqvhelgceg  180
DSSP  llllllleeeeeeellllhhhhhhhhhhhhhhhhhllllleeeeeeelleeeeeelllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct isksyvfrgtkdlsakqlqemlgpppsnrflqpvqkidmnltdllgelqrdpwpvpqgkr  240
DSSP  lleeeeeelllllllhhhhhhhllllllllleehhhhhhhhhhhhhhlllllllllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct plrssgvalsiavgllectfpntgarimmfiggpatqgpgmvvgdelktpirswhdidkd  300
DSSP  llllhhhhhhhhhhhhhhhllllleeeeeeellllllllllllllllllllllhhhhhll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct nakyvkkgtkhfealanraattghvidiyacaldqtgllemkccpnltggymvmgdsfnt  360
DSSP  llllhhhhhhhhhhhhhhhhhhlleeeeeeellllllhhhhlhhhhhlllleeeelllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct slfkqtfqrvftkdmhgqfkmgfggtleiktsreikisgaigpcvslnskgpcvseneig  420
DSSP  hhhhhhhhhlllllllllllleeeeeeeeeellleeeeeeellleellllllleeeeeee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct tggtcqwkicglsptttlaiyfevvggrgaiqfvtqyqhssgqrrirvttiarnwadaqt  480
DSSP  llllleeeeeeellllleeeeeeelllleeeeeeeeeellllleeeeeeeeeeeellhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct qiqniaasfdqeaaailmarlaiyraetedvlrwldrqlirlcqkfgeyhkddpssfrfs  540
DSSP  hhhhhhhlllhhhhhhhhhhhhhhhhllllhhhhhhhhhhhhhhhhleeelleeeeeell


DSSP  ..........................lllllllllhhhhhhhhHHHHhlllllLLEEEEE
Query ..........................lepidytthsreidaeyLKIVrgsdpdTTWLIIS   34
ident                                              |              
Sbjct etfslypqfmfhlrrssflqvfnnspdessyyrhhfmrqdltqSLIM......IQPILYA  594
DSSP  lllllhhhhhhhhhhllllllllllhhhhhhhhhhhllllhhhHHHH......HLLEEEE


DSSP  EllLLLEEEEEEellhhhhhlLLLLLLLEEEEEEelllllllleEEEEEELLLLL.LHHH
Query PnaKKEYEPESTgssfhdflqLFDETKVQYGLARvsppgsdvekIIIIGWCPDSA.PLKT   93
ident        ||                                     |             
Sbjct YsfSGPPEPVLL......dssSILADRILLMDTF..........FQILIYHGETIaQENF  638
DSSP  EllLLLLEELLL......lhhHLLLLLEEEEEEL..........LEEEEEELLLLlLLHH


DSSP  hHHHHHHHHHHHHhLLLL....lLEEEEELL.HHHHL............hhhhhhhhhll
Query rASFAANFAAVANnLFKG....yHVQVTARD.EDDLD............enellmkisna  136
ident            |                                                
Sbjct .RHLLQAPVDDAQ.EILHsrfpmPRYIDTEHgGSQARfllskvndvslqvfmdhlkklav  696
DSSP  .HHHHLHHHHHHH.HHHHhllllLEEEEEELlLHHHHhhhhhlllllhhhhhhhhhhhhl


DSSP  lll
Query aga  139
ident    
Sbjct ssa  699
DSSP  lll


No 13: 2BVFA  MOLECULE: 6-HYDROXY-D-NICOTINE OXIDASE;                              

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct klatplsiqgeviypddsgfdaianiwdgrhlqrpsliarclsagdvaksvryacdngle   60
DSSP  lllllllllleeellllllhhhhhlllllllllllleeeelllhhhhhhhhhhhhhhlll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct isvrsgghnpngyatndggivldlrlmnsihidtagsrarigggvisgdlvkeaakfgla  120
DSSP  eeeellllllllllllllleeeelllllleeeelllleeeeellllhhhhhhhhhlllee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct avtgmhpkvgfcglalnggvgfltpkyglasdnilgatlvtatgdviycsdderpelfwa  180
DSSP  elllllllllhhhhhllllllllhhhhllhhhheeeeeeellllleeeeellllhhhhhh


DSSP  ..............................llllllLLLHHHHHHHHHHHhhLLLL..LL
Query ..............................lepidyTTHSREIDAEYLKIvrGSDP..DT   28
ident                                                             
Sbjct vrgagpnfgvvtevevqlyelprkmlagfitwapsvSELAGLLTSLLDAL..NEMAdhIY  238
DSSP  hhhhhhhlleeeeeeeeeeelllleeeeeeeelllhHHHHHHHHHHHHHH..HHLLllLL


DSSP  LEEEEEELLLLLEEEeEEELL.......................................
Query TWLIISPNAKKEYEPeSTGSS.......................................   49
ident                                                             
Sbjct PSVFVGVDENRAPSV.TVCVGhlggldiaerdiarlrglgrtvsdsiavrsydevvalna  297
DSSP  LEEEEEELLLLLEEE.EEEEEllllhhhhhhhhhhhhlllllleelleeelhhhhhhhhh


DSSP  .................................hhhhhlllllLLLEEEEEEELLLL...
Query .................................fhdflqlfdeTKVQYGLARVSPPG...   73
ident                                              |              
Sbjct evgsfedgmsnlwidreiampnarfaeaiagnldkfvsepasgGSVKLEIEGMPFGNpkr  357
DSSP  hhllllllleeeeeeeeelllhhhhhhhhhllhhhleeellllEEEEEEEELLLLLLlll


DSSP  ...lLLLEEEEEEELLLL....lLHHHHHHHHHHHHHHHHHlllllleeeeellhHHHL.
Query ...sDVEKIIIIGWCPDS....aPLKTRASFAANFAAVANNlfkgyhvqvtardeDDLD.  125
ident                  |       |         ||                       
Sbjct tparHRDAMGVLALAEWSgaapgSEKYPELARELDAALLRA.....gvttsgfglLNNNs  412
DSSP  llllLLLLLEEEEEEEELlllllLLHHHHHHHHHHHHHHHL.....lleeeeellHHHLl


DSSP  ...........................hhhhhhhhhlllll
Query ...........................enellmkisnaaga  139
ident                                          
Sbjct evtaemvaevykpevysrlaavkreydpenrfrhnynidpe  453
DSSP  lllhhhhhhhhlhhhhhhhhhhhhhhlllllllllllllll


No 14: 1B49A  MOLECULE: PROTEIN (DEOXYCYTIDYLATE HYDROXYMETHYLASE);                

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct misdsmtveeirlhlglalkekdfvvdktgvktieiigasfvadepfifgalndeyiqre   60
DSSP  lllllllhhhhhhhhhhhhhlllleellllleeeeeeeeeeelllllllllllhhhhhhh


DSSP  ..............................llllLLLLLHH.....HHHHHHHHHhHLLL
Query ..............................lepiDYTTHSR.....EIDAEYLKIvRGSD   25
ident                                    |                |    |  
Sbjct lewykskslfvkdipgetpkiwqqvasskgeinsNYGWAIWsednyAQYDMCLAE.LGQN  119
DSSP  hhhhhhllllhhhllllllhhhhhhlllllllllLHHHHHHlhhhlLHHHHHHHH.HHHL


DSSP  LLLL.EEEEEELLLLleeeeeeellhhhhhlllllLLLE.EEEEEELllllllLEEEEEE
Query PDTT.WLIISPNAKKeyepestgssfhdflqlfdeTKVQ.YGLARVSppgsdvEKIIIIG   83
ident ||      |                                             ||    
Sbjct PDSRrGIMIYTRPSM........qfdynkdgmsdfMCTNtVQYLIRD......KKINAVV  165
DSSP  LLLLlLEEELLLLLH........hhhllhhhllllLLEEeEEEEEEL......LEEEEEE


DSSP  ELLLlllhhhhHHHHHHHHHHHHhLLLL...............LLEEEEELL........
Query WCPDsaplktrASFAANFAAVANnLFKG...............YHVQVTARD........  120
ident              |    |                                         
Sbjct NMRS...ndvvFGFRNDYAWQKY.VLDKlvsdlnagdstrqykAGSIIWNVGslhvysrh  221
DSSP  EEEE...eellLHHHHHHHHHHH.HHHHhhhhhhhhlllllleEEEEEEEEEeeeeehhh


DSSP  .hhhhlhhhhhhhhhlllll
Query .eddldenellmkisnaaga  139
ident                     
Sbjct fylvdhwwktgethiskkdy  241
DSSP  hhhhhhhhhhllllllllll


No 15: 1H65A  MOLECULE: CHLOROPLAST OUTER ENVELOPE PROTEIN OEP34;                  

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct vrewsgintfapatqtkllellgnlkqedvnsltilvxgkggvgksstvnsiigervvsi   60
DSSP  leelhhhhhllhhhhhhhhhhhhhhhhlllleeeeeeeelllllhhhhhhhhhlllllll


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct spfqsegprpvxvsrsragftlniidtpglieggyindxalniiksflldktidvllyvd  120
DSSP  lllllllllleeeeeeelleeeeeeelllleelleelhhhhhhhhhhlllleeleeeeee


DSSP  .llLLLLlllHHHHHHHHHHHhHLLLLllleeeeeellllleeeeeeellhhhhhlllll
Query .lePIDYtthSREIDAEYLKIvRGSDPdttwliispnakkeyepestgssfhdflqlfde   59
ident                     |   |                                   
Sbjct rldAYRV...DNLDKLVAKAI.TDSFG.................................  143
DSSP  ellLLLL...LHHHHHHHHHH.HHHHL.................................


DSSP  llleeeeeeelllllllLEEEEEEELLLLLL...HHHHHHHHHHHHHHHhHLLL......
Query tkvqyglarvsppgsdvEKIIIIGWCPDSAP...LKTRASFAANFAAVAnNLFK......  110
ident                   | |         |   |     |     |             
Sbjct .............kgiwNKAIVALTHAQFSPpdgLPYDEFFSKRSEALL.QVVRsgaslk  189
DSSP  .............hhhhHHEEEEEELLLLLLhhhLLHHHHHHHHHHHHH.HHHHhhllll


DSSP  .....LLLEEEEELL.................HHHHL.HHHHHHHHHLLL..........
Query .....GYHVQVTARD.................EDDLD.ENELLMKISNAA..........  137
ident           |                                                 
Sbjct kdaqaSDIPVVLIENsgrcnkndsdekvlpngIAWIPhLVQTITEVALNKsesifvdknl  249
DSSP  lllhhHLLLEEELLLlllllllllllllllllLLHHHhHHHHHHHHHLLLllleellhhh


DSSP  ......ll
Query ......ga  139
ident         
Sbjct idklaaad  257
DSSP  hhhhhhll


No 16: 2GIAB  MOLECULE: MITOCHONDRIAL RNA-BINDING PROTEIN 2;                       

DSSP  .......................................................llLLL
Query .......................................................lePID    5
ident                                                             
Sbjct slpkfeihdvrddpaegtmtrvavdgklllisqypqlgprkvdpndlspqfdadrriSVR   60
DSSP  llleeeeeellllhhhleeeeeeeelleeeeeeeelllllllllllllllllhhhleEEE


DSSP  LlllHHHHHHHHHHHHHLLlllLLEEEEEELlllleeeeeeellhhhhhllllllLLEEE
Query YtthSREIDAEYLKIVRGSdpdTTWLIISPNakkeyepestgssfhdflqlfdetKVQYG   65
ident          |                                                  
Sbjct L...RHVDLAYLVGVCKER...VPRHRMETK........................AYTLD   90
DSSP  L...LHHHHHHHHHHHLLL...LLEEEEELL........................LLEEE


DSSP  EEEELlllllllEEEEEEELlllLLHHhhHHHHhhhhhhhhhlllllleeeeellhhhhl
Query LARVSppgsdveKIIIIGWCpdsAPLKtrASFAanfaavannlfkgyhvqvtardeddld  125
ident                  |                                          
Sbjct FEKSA......qGYHLHGKV..hRVAS..QRME...........................  113
DSSP  EEELL......lEEEEEEEE..lLLLL..LLLE...........................


DSSP  hhhhhhhHHLL....................lll
Query enellmkISNA....................aga  139
ident                                   
Sbjct .dwsvkfDNHFavtlehflesaldesfgfrqhya  146
DSSP  .eeeeeeELHHhhhhhhhhhhhhhhlllhhhhhl


No 17: 2CZRA  MOLECULE: TBP-INTERACTING PROTEIN;                                   

DSSP  lllllllLLHHHH.....hhhhhhhhhllllllLEEEEEellllleeeeeeellhhhhhl
Query lepidytTHSREI.....daeylkivrgsdpdtTWLIISpnakkeyepestgssfhdflq   55
ident          |                        | |                       
Sbjct ...glvpRGSHMYaelspgtkkvytqvrylddyHWEIEG.....................   36
DSSP  ...lllhHHHHHHhlllhhhhhhhhhhllllleEEEEEL.....................


DSSP  lllllllEEEEEEELllllLLLEEEEEEELLLlllhhhHHHHHHhHHHHhhhlLLLLlEE
Query lfdetkvQYGLARVSppgsDVEKIIIIGWCPDsaplktRASFAAnFAAVannlFKGYhVQ  115
ident                           |           |       |             
Sbjct .......STITGIHK....KSNVKVVIDVAKN......REEADS.LAGK....DVNG.IH   73
DSSP  .......LEEEEEEL....LLLLEEEEEELLL......HHHHHH.HLLL....LLLL.EE


DSSP  EEEL...............LHHHHlHHHHHHHHHLLL.......................
Query VTAR...............DEDDLdENELLMKISNAA.......................  137
ident   |                    |    |                               
Sbjct IVAIpdngvfyikngsfvlTYRYL.KATLADINDHIVwsgfkvvedngklvqedvyeylg  132
DSSP  EEEEllllleeeelleeeeEHHHH.HHHHHHHHHLEEeeeeeeeeelleeeeeeeeeelh


DSSP  ............................................................
Query ............................................................  137
ident                                                             
Sbjct aalvnhiknnalagqdyifwqfykceecgkyvdienleahlrehgiklhekseehyevfe  192
DSSP  hhhhhhhhlllllllleeeeeeeelllllleeehhhhhhhhhlllllhhhlleeeleeee


DSSP  ................................ll
Query ................................ga  139
ident                                   
Sbjct lnfregkvfdkfggevpmdkfssearefikevls  226
DSSP  eelllleeeelllllllhhhllhhhhhhhhhhll


No 18: 2AS0A  MOLECULE: HYPOTHETICAL PROTEIN PH1915;                               

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct xarvvvdaqaaraigkgaxivfkkgvvrvegdikpgdivevytrggkflgkgfanpnsni   60
DSSP  lleeeelhhhhhhhhlllleeehhheeeeellllllleeeeeelllleeeeeeellllle


DSSP  .........llllLLLLlhHHHHHHHHHhhhlLLLLL..LEEEEEelllllEEEEeeell
Query .........lepiDYTThsREIDAEYLKivrgSDPDT..TWLIISpnakkeYEPEstgss   49
ident                    | |              |                       
Sbjct xvrivtkdkdveiNKDLfkRRIKKANEY.rkkVLKYTnvYRXVYG......EADY.....  108
DSSP  eeeeeelllllllLHHHhhHHHHHHHHH.hhhLLLLLleEEEEEH......HHHL.....


DSSP  hhhhhlllllllLEEEEEEEllllllllEEEEEEELlllllhhHHHHHhHHHHHHHHhLL
Query fhdflqlfdetkVQYGLARVsppgsdveKIIIIGWCpdsaplkTRASFaANFAAVANnLF  109
ident                              |                        ||    
Sbjct ..........lpGLIVDRFN........DIASLQIS.......SAGXE.RFKLDVAE.AI  141
DSSP  ..........llLEEEEEEL........LEEEEEEL.......LHHHH.LLHHHHHH.HH


DSSP  LL....LLEE.EEELL........hHHHLhhhhhHHHHL.....................
Query KG....YHVQ.VTARD........eDDLDenellMKISN.....................  135
ident                                    |                        
Sbjct XEvepgIETVfEKNTGrsrrreglpEIERvllgkEKYRTiiqegrakfivdxrgqktgff  201
DSSP  HHhlllLLEEeEEELLhhhhhllllLEEEeeeelLLLEEeeeelleeeeeelllllllll


DSSP  ............................................................
Query ............................................................  135
ident                                                             
Sbjct ldqrenrlalekwvqpgdrvldvftytggfaihaaiagadevigidkspraietakenak  261
DSSP  lllhhhhhhhhhhllllleeeellllllhhhhhhhhlllleeeeeellhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................  135
ident                                                             
Sbjct lngvedrxkfivgsafeexeklqkkgekfdivvldppafvqhekdlkaglrayfnvnfag  321
DSSP  hlllhhheeeeellhhhhhhhhhhlllleeeeeellllllllhhhhhhhhhhhhhhhhhh


DSSP  ............................................................
Query ............................................................  135
ident                                                             
Sbjct lnlvkdggilvtcscsqhvdlqxfkdxiiaagakagkflkxlepyrtqapdhpilxaskd  381
DSSP  hlleeeeeeeeeeellllllhhhhhhhhhhhhhhlleeeeelllllllllllllllllhh


DSSP  ...........llll
Query ...........aaga  139
ident                
Sbjct teylkclflyvedxr  396
DSSP  hllleeeeeeeeell


No 19: 1OB8A  MOLECULE: HOLLIDAY-JUNCTION RESOLVASE;                               

DSSP  lllllllllhhhhhhhhhhhhhllllllLEEEEEEllllleeeeeeellhhhhhllllll
Query lepidytthsreidaeylkivrgsdpdtTWLIISPnakkeyepestgssfhdflqlfdet   60
ident                                 |                           
Sbjct ...........gknaerelvsilrgegfNAVRIPT........................n   25
DSSP  ...........lhhhhhhhhhhhhhlllEEEELLL........................l


DSSP  lleEEEEEELllllllLEEEEEEELLLLllhhhhhHHHHHHHHHHHHLLLL...lLEEEE
Query kvqYGLARVSppgsdvEKIIIIGWCPDSaplktraSFAANFAAVANNLFKG...yHVQVT  117
ident       |              |                                  |   
Sbjct plpDIFATKG......NTLLSIECKSTW...enkvKVKEHQVRKLLDFLSMftmkGVPLI   76
DSSP  lllLEEEEEL......LEEEEEEEEEEL...lleeEELHHHHHHHHHHHHLllleEEEEE


DSSP  ELL.....HHHH.................LHHHHHHHHHLLlll
Query ARD.....EDDL.................DENELLMKISNAaga  139
ident |       |                        |          
Sbjct AIKfkqvhEWRVlvpekaediivtidnsiPIEDLFKILEKR.ie  119
DSSP  EEEehhhlEEEEellllllleeeelllleEHHHHHHHHHHH.hl


No 20: 1MJHA  MOLECULE: PROTEIN (ATP-BINDING DOMAIN OF PROTEIN MJ0577);            

DSSP  ...lllllllllHHHHHHHHHHHHHLlllllleeeeeellllleeeeeeellhhhhhlll
Query ...lepidytthSREIDAEYLKIVRGsdpdttwliispnakkeyepestgssfhdflqlf   57
ident             |                                               
Sbjct vmykkilyptdfSETAEIALKHVKAF..................................   26
DSSP  lllleeeeelllLHHHHHHHHHHHHL..................................


DSSP  llllleeeeeeellllLLLLEEEEEEELLLLL......LHHHHHHHHHHHHHHHHhLLLL
Query detkvqyglarvsppgSDVEKIIIIGWCPDSA......PLKTRASFAANFAAVANnLFKG  111
ident                    |  |                                   | 
Sbjct ..............ktLKAEEVILLHVIDEREikveefENELKNKLTEEAKNKME.NIKK   71
DSSP  ..............llLLLLEEEEEEEEEHHHlllhhhHHHHHHHHHHHHHHHHH.HHHH


DSSP  .......lLEEEEEL..LHHHHL..HHHHHH.............................
Query .......yHVQVTAR..DEDDLD..ENELLM.............................  131
ident                                                             
Sbjct eledvgfkVKDIIVVgiPHEEIVkiAEDEGVdiiimgshgktnlkeillgsvtenvikks  131
DSSP  hhhhllleEEEEEEEelHHHHHHhhHHHLLLleeeeelllllllllllllhhhhhhhhhl


DSSP  ....hhhlllll
Query ....kisnaaga  139
ident             
Sbjct nkpvlvvkrkns  143
DSSP  llleeeelllll


No 21: 2A67A  MOLECULE: ISOCHORISMATASE FAMILY PROTEIN;                            

DSSP  ................llllllLLLHHHHHHHHHHHHHLlllllleeeeeellllleeee
Query ................lepidyTTHSREIDAEYLKIVRGsdpdttwliispnakkeyepe   44
ident                                                             
Sbjct axknralllidfqkgiesptqqLYRLPAVLDKVNQRIAV.....................   39
DSSP  lllleeeeeellllllllllllLLLHHHHHHHHHHHHHH.....................


DSSP  eeellhhhhhlllllllleeeeeeelllllLLLEEEEEEELlllllhHHHHhHHHHHHhh
Query stgssfhdflqlfdetkvqyglarvsppgsDVEKIIIIGWCpdsaplKTRAsFAANFAav  104
ident                                   ||                        
Sbjct ...........................yrqHHAPIIFVQHE.....eTELPfGSDSWQ..   65
DSSP  ...........................hhhLLLLEEEEEEL.....lLLLLlLLLLLL..


DSSP  HHHLLLL..lLEEEEELL....HHHHLHhHHHHH..........................
Query ANNLFKG..yHVQVTARD....EDDLDEnELLMK..........................  132
ident                               ||                            
Sbjct LFEKLDTqptDFFIRKTHanafYQTNLN.DLLTEqavqtleiagvqtefcvdttirxahg  124
DSSP  LLLLLLLlllLEEEEELLllllLLLLHH.HHHHHlllleeeeeeellllhhhhhhhhhhh


DSSP  ...................................hhlllll
Query ...................................isnaaga  139
ident                                           
Sbjct lgytclxtpkttstldnghltaaqiiqhheaiwagrfltfls  166
DSSP  hlleeeelllleellllllllhhhhhhhhhhhhllllleell


No 22: 1OD2A  MOLECULE: ACETYL-COENZYME A CARBOXYLASE;                             

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct atpypvkewlqpkrykahlxgttyvydfpelfrqasssqwknfsadvkltddffisneli   60
DSSP  llllllhhhhlhhhhhhhhlllllhhhhhhhhhhhhhhhhhlllllllllllleeeeeee


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct edengelteverepganaigxvafkitvktpeyprgrqfvvvanditfkigsfgpqedef  120
DSSP  ellllleeeelllllllllleeeeeeeeeelleeeeeeeeeeeelllhhhhlllhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct fnkvteyarkrgipriylaansgarigxaeeivplfqvawndaanpdkgfqylyltsegx  180
DSSP  hhhhhhhhhhhllleeeeeellllllllllllhhhleeeelllllhhhleeeeeelhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct etlkkfdkensvltertvingeerfviktiigsedglgveclrgsgliagatsrayhdif  240
DSSP  hhlhhhllllleellllllllllleelleellllllllhhhhhhhhhhhhhhhhhlllll


DSSP  ................llllLLLL....................................
Query ................lepiDYTT....................................    8
ident                                                             
Sbjct titlvtcrsvgigaylvrlgQRAIqvegqpiiltgapainkxlgrevytsnlqlggtqix  300
DSSP  eeeeeeeeeelhhhhhhhhlLLEEeelllleelllhhhhhhhlllllllllhhhhlhhhh


DSSP  ..............lhHHHHHHHHHHHH................................
Query ..............hsREIDAEYLKIVR................................   22
ident                  |   |    |                                 
Sbjct ynngvshltavddlagVEKIVEWXSYVPakrnxpvpiletkdtwdrpvdftptndetydv  360
DSSP  hhhlllleeellhhhhHHHHHHHHLLLLlllllllllllllllllllllllllllllllh


DSSP  ...............lllllLLEEEEEELlllleeeeeeellhhhhhllllllLLEEEEE
Query ...............gsdpdTTWLIISPNakkeyepestgssfhdflqlfdetKVQYGLA   67
ident                                                       |  | |
Sbjct rwxiegretesgfeyglfdkGSFFETLSG.....................wakGVVVGRA  399
DSSP  hhhhheeeelleeeelllllLLLEEELLL.....................lllLEEEEEE


DSSP  EELllllllLEEEEEEELL.........................LLLLHHHHHHHHHHHH
Query RVSppgsdvEKIIIIGWCP.........................DSAPLKTRASFAANFA  102
ident |                                                   |   |   
Sbjct RLG......GIPLGVIGVEtrtvenlipadpanpnsaetliqepGQVWHPNSAFKTAQAI  453
DSSP  EEL......LEEEEEEEELllleeeeellllllllllleeeeelLLLLLHHHHHHHHHHH


DSSP  HHHHHLLLLLleEEEEL.....................................LHHH..
Query AVANNLFKGYhvQVTAR.....................................DEDD..  123
ident    ||                                                       
Sbjct NDFNNGEQLP..XXILAnwrgfsggqrdxfnevlkygsfivdalvdykqpiiiyIPPTge  511
DSSP  HHHHHLLLLL..EEELLllllllllhhhhhllhhhhhhhhhhhhhhlllleeeeELLLle


DSSP  ............................................................
Query ............................................................  123
ident                                                             
Sbjct lrggswvvvdptinadqxexyadvnaragvlepqgxvgikfrreklldtxnrlddkyrel  571
DSSP  eehhhhhlllhhhhllleeeeeellleeelllhhhhhhhhllhhhhhhhhhhhlhhhhhh


DSSP  ...........................................................h
Query ...........................................................l  124
ident                                                             
Sbjct rsqlsnkslapevhqqiskqladrerellpiygqislqfadlhdrssrxvakgviskele  631
DSSP  hhhhhlllllhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhlllllhhhhhhllllleeel


DSSP  LHHHHHHHHHL.LLLL............................................
Query DENELLMKISN.AAGA............................................  139
ident                                                             
Sbjct WTEARRFFFWRlRRRLneeylikrlshqvgeasrlekiarirswypasvdheddrqvatw  691
DSSP  HHHHHHHHHHHhHHHHhhhhhhhhlllllllllhhhhhhhhhlllllllllllhhhhhhh


DSSP  ............................
Query ............................  139
ident                             
Sbjct ieenyktlddklkglklesfaqdlakki  719
DSSP  hhhlhhhhhhhhhhhhhhhllhhhhlll


No 23: 1HH1A  MOLECULE: HOLLIDAY JUNCTION RESOLVING ENZYME HJC;                    

DSSP  lllllllllhhhhhhhhhhhhhllllllLEEEEEELLllleeeeeeellhhhhhllllll
Query lepidytthsreidaeylkivrgsdpdtTWLIISPNAkkeyepestgssfhdflqlfdet   60
ident                                     |                       
Sbjct ..............savernivsrlrdkGFAVVRAPA.....................pi   25
DSSP  ..............lhhhhhhhhhhhhlLLEEEELLL.....................ll


DSSP  lLEEEEEEelllllllleEEEEEELLLL.........LLHHHHHHHHHHHHHHHhhllll
Query kVQYGLARvsppgsdvekIIIIGWCPDS.........APLKTRASFAANFAAVAnnlfkg  111
ident      |              ||     |                                
Sbjct pDIIALKN..........GVIILIEMKSrkdiegkiyVRREQAEGIIEFARKSG......   69
DSSP  lLEEEEEL..........LEEEEEEELLeellllleeELHHHHHHHHHHHHHHL......


DSSP  lleeEEELL......HHHH......................LHHHHHHHHHL.LLLL..
Query yhvqVTARD......EDDL......................DENELLMKISN.AAGA..  139
ident                                          |   |             
Sbjct ...gSLFLGvkkpgvLKFIpfeklrrtetgnyvadseieglDLEDLVRLVEAkISRTld  125
DSSP  ...lEEEEEeellllEEEEehhhleellllleellllllllLHHHHHHHHHHhHHHHhl


No 24: 2HPUA  MOLECULE: NOSL PROTEIN;                                              

DSSP  lllllllllhhhhhhhhhhhhhllllllLEEEEEELllllEEEEEEELLHHHHHLLL...
Query lepidytthsreidaeylkivrgsdpdtTWLIISPNakkeYEPESTGSSFHDFLQLF...   57
ident                                |               |   |        
Sbjct ............................KAQIFLEG....SPAPLFFSQVRDAIAYArgp   28
DSSP  ............................LEEEEELL....LLLEEEELLHHHHHHHHllh


DSSP  LLLLLE.EEEEEELL......llLLLLEEEEEEellllllhhhhhhhhhhhhhhhhhlll
Query DETKVQ.YGLARVSP......pgSDVEKIIIIGwcpdsaplktrasfaanfaavannlfk  110
ident                              |                              
Sbjct EQIAPIlVIYVNDMGaagatwdqPGDGNWIAAD...........................   61
DSSP  HHHLLEeEEEEEELLllllllllLLLLEEELHH...........................


DSSP  llleeeeellhhhhLHHH...........hhhhHHLLL......................
Query gyhvqvtardeddlDENE...........llmkISNAA......................  137
ident                                   |                         
Sbjct ...........kafYVVGsarrggmgapeavpfSSRDEaaafvlaeggqvlaladitdam  110
DSSP  ...........hleEEEEllllllllllleeeeLLHHHhhhhhhhleeeeeehhhllhhh


DSSP  ..............ll
Query ..............ga  139
ident                 
Sbjct vltpvetgsepradde  126
DSSP  hlllllllllllllll


No 25: 2H1XA  MOLECULE: 5-HYDROXYISOURATE HYDROLASE (FORMERLY KNOWN AS             

DSSP  lllllllllhhhhhhhhhhhhhllllllLEEEEEEL.LLLLEEEEEEELL......hhhh
Query lepidytthsreidaeylkivrgsdpdtTWLIISPN.AKKEYEPESTGSS......fhdf   53
ident                             |                 ||            
Sbjct .........splsthvlniaqgvpganmTIVLHRLDpVSSAWNILTTGITnddgrcpgli   51
DSSP  .........lleelleeelllleellllEEEEEEELlLLLLEEEEEEEELllllllllll


DSSP  hlllLLLLLEEEEEEEL....lLLLLL.lEEEEEEELLLLllhhhhhhhhhhhhhhhhhl
Query lqlfDETKVQYGLARVS....pPGSDV.eKIIIIGWCPDSaplktrasfaanfaavannl  108
ident         |              |         |                          
Sbjct tkenFIAGVYKMRFETGkywdaLGETCfyPYVEIVFTITN....................   91
DSSP  llllLLLEEEEEEELHHhhhhlLLLLLllLLEEEEEEELL....................


DSSP  llllleeeeellHHHHLHHhhhhhHHLL.....lll
Query fkgyhvqvtardEDDLDENellmkISNA.....aga  139
ident                          |          
Sbjct .........tsqHYHVPLL.....LSRFsystyrgs  113
DSSP  .........lllLEELLEE.....ELLLeeeeelll


No 26: 1RJMA  MOLECULE: MENB;                                                      

DSSP  lllllllllhhhhhhhhhhhhhllllllLEEEeeelllllEEEEeeellhhhhhllllll
Query lepidytthsreidaeylkivrgsdpdtTWLIispnakkeYEPEstgssfhdflqlfdet   60
ident                               |                             
Sbjct .....................npfdakaWRLV.......dGFDD...............l   17
DSSP  .....................llllhhhEEEL.......lLLLL...............l


DSSP  lLEEEEEEELllllllLEEEEEEELLLLLlhhHHHH.HHHHHHHHHhHLLL....llLEE
Query kVQYGLARVSppgsdvEKIIIIGWCPDSAplkTRAS.FAANFAAVAnNLFK....gyHVQ  115
ident         |                                   |             | 
Sbjct tDITYHRHVD......DATVRVAFNRPEV.rnAFRPhTVDELYRVL.DHARmspdvgVVL   69
DSSP  lLEEEEEELL......LLEEEEEELLHHH.llLLLHhHHHHHHHHH.HHHHhlllllEEE


DSSP  EEELL.......................................................
Query VTARD.......................................................  120
ident  |                                                          
Sbjct LTGNGpspkdggwafcsgghilevqrlirfmpkvviclvngwaaggghslhvvcdltlas  129
DSSP  EEELLlllllllleeellllhhhhhhhhhhllleeeeeelleeelhhhhhhhhlleeeee


DSSP  ...........................................................h
Query ...........................................................e  121
ident                                                             
Sbjct reyarfkqtdadvgsfdggygsaylarqvgqkfareifflgrtytaeqmhqmgavnavae  189
DSSP  lllleeellhhhhlllllllllhhhhhhhhhhhhhhhhhhlleelhhhhhhhlllleeel


DSSP  hhhLHHHHHHHHHLLL................................ll
Query ddlDENELLMKISNAA................................ga  139
ident     |   |                                         
Sbjct haeLETVGLQWAAEINakspqaqrmlkfafnllddglvgqqlfageatrl  239
DSSP  hhhHHHHHHHHHHHHHlllhhhhhhhhhhhhhlllhhhhhhhhhhhhhhl


No 27: 1R5BA  MOLECULE: EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP-               

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct tedatdlqnevdqellkdmygkehvnivfighvdagkstlggnilfltgmvdkrtmekie   60
DSSP  lllllllllllllllhhhhllleeeeeeeeelhhhlhhhhhhhhhhhlllllhhhhhhhh


DSSP  .......................................lllllLLLLHhHHHHHHHHHH
Query .......................................lepidYTTHSrEIDAEYLKIV   21
ident                                                             
Sbjct reakerayfetehrrfslldapgasqadigvlvisarrgefeagFERGG.QTREHAVLAR  119
DSSP  hhllllleeellleeeeelllllllllleeeeeeellllhhhhlLLLLL.LHHHHHHHHH


DSSP  HLlllllleeeeeellllleeeeeeellhhhhhlllllllleeeeeeelllllllLEEEE
Query RGsdpdttwliispnakkeyepestgssfhdflqlfdetkvqyglarvsppgsdvEKIII   81
ident                                                             
Sbjct TQ...................................................giNHLVV  128
DSSP  HL...................................................llLLEEE


DSSP  EEE.LLLLLLHhHHHHHHHHHHHHHhHLLL........lLLEEEEELL..HHHH......
Query IGW.CPDSAPLkTRASFAANFAAVAnNLFK........gYHVQVTARD..EDDL......  124
ident                                                             
Sbjct VINkMDEPSVQwSEERYKECVDKLS.MFLRrvagynsktDVKYMPVSAytGQNVkdrvds  187
DSSP  EEElLLLLLLLlLHHHHHHHHHHHH.HHHHhhhlllhhhHEEEEELLLllLLLLllllll


DSSP  .........LHHHHHHhhHLLLL.....................................
Query .........DENELLMkiSNAAG.....................................  138
ident             | |                                             
Sbjct svcpwyqgpSLLEYLD.sMTHLErkvnapfimpiaskykdlgtilegkieagsikknsnv  246
DSSP  lllllllllLHHHHHH.hLLLLHhhhlllleeelleeeellleeeeeelllleeelleee


DSSP  ............................................................
Query ............................................................  138
ident                                                             
Sbjct lvmpinqtlevtaiydeadeeisssicgdqvrlrvrgddsdvqtgyvltstknpvhattr  306
DSSP  eeellleeeeeeeeellllleeleeellleeeeeeelllllllllleeellllllleeee


DSSP  ............................................................
Query ............................................................  138
ident                                                             
Sbjct fiaqiailelpsilttgyscvmhihtaveevsfakllhkldktnrkskkppmfatkgmki  366
DSSP  eeeeeeellllllllllllleeelllllllleelllllllllllllllllllllllllll


DSSP  ..........................................l
Query ..........................................a  139
ident                                            
Sbjct iaeletqtpvcmerfedyqymgrftlrdqgttvavgkvvkild  409
DSSP  leeeeeeeeeelllllllhhhheeeeellllleeeeeeeeeel


No 28: 1VHXA  MOLECULE: PUTATIVE HOLLIDAY JUNCTION RESOLVASE;                      

DSSP  .................................llllllllLHHHHHHHHHHHHhlllll
Query .................................lepidyttHSREIDAEYLKIVrgsdpd   27
ident                                                             
Sbjct slrilgldlgtktlgvalsdexgwtaqgietikineaegdyGLSRLSELIKDYT......   54
DSSP  leeeeeeeellleeeeeeelllllleeeeeeeellhhhlllLHHHHHHHHLLLE......


DSSP  lleeeeeellllleeeeeeellhhhhhlllllllleeeeeeelllllllleEEEEEELLL
Query ttwliispnakkeyepestgssfhdflqlfdetkvqyglarvsppgsdvekIIIIGWCPD   87
ident                                                      |    | 
Sbjct ..................................................iDKIVLGFPK   64
DSSP  ..................................................eEEEEEELLL


DSSP  L...lLHHHHHHHHHHHHHHHHhLLLLlleEEEELLH.......................
Query S...aPLKTRASFAANFAAVANnLFKGyhvQVTARDE.......................  121
ident                                |                            
Sbjct NxngtVGPRGEASQTFAKVLET.TYNV..pVVLWDERlttxaaekxliaadvsrqkrkkv  121
DSSP  LllllLLHHHHHHHHHHHHHHH.HHLL..lEEEELLLllhhhhhhhhhhllllhhhhhhh


DSSP  .......HHHL..HHHHHHhhhlllll
Query .......DDLD..ENELLMkisnaaga  139
ident          |      |          
Sbjct idkxaavXILQgyLDSLNE........  140
DSSP  hhhhhhhHHHHhhHHHHLL........


No 29: 1BO7A  MOLECULE: PROTEIN (THYMIDYLATE SYNTHASE);                            

DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct mleqpyldlakkvldeghfkpdrthtgtysifghqmrfdlskgfpllttkkvpfglikse   60
DSSP  lllhhhhhhhhhhhllleeellllllleeeeeeeeeeeellllllllllllllhhhhhhh


DSSP  ............................................................
Query ............................................................    0
ident                                                             
Sbjct llwflhgdtnirfllqhrnhiwdewafekwvksdeyhgpdmtdfghrsqkdpefaavyhe  120
DSSP  hhhhhllllllhhhhlllllllhhhhhhhhhllllllllllllhhhhhhhlllhhhhhhh


DSSP  ....................lllllLLLLHH...........HHHHHHHHHhhLLLLLLL
Query ....................lepidYTTHSR...........EIDAEYLKIvrGSDPDTT   29
ident                          |    |                   |     |   
Sbjct emakfddrvlhddafaakygdlglvYGSQWRawhtskgdtidQLGDVIEQI..KTHPYSR  178
DSSP  hhhhhhhhhhhlhhhhhhhllllllHHHHHHleellllleelHHHHHHHHH..HHLLLLL


DSSP  EEEEE.ELLLlleeeeeeellhhhhhlllllLLLEEEEEEELllllllLEEEEEEELLLl
Query WLIIS.PNAKkeyepestgssfhdflqlfdeTKVQYGLARVSppgsdvEKIIIIGWCPDs   88
ident  || |  |                           |             |          
Sbjct TLIVSaWNPE............dvptmalppCHTLYQFYVND......GKLSLQLYQRS.  219
DSSP  LLEEElLLLL............lllllllllLEEEEEEEEEL......LEEEEEEEEEE.


DSSP  llhhhhHHHHHHHHHHHHhLLLL........LLEEEEELL....................
Query aplktrASFAANFAAVANnLFKG........YHVQVTARD....................  120
ident            | |  |  |                                        
Sbjct ..adifLGVPFNIASYAL.LTHLvahecgleVGEFIHTFGdahlyvnhldqikeqlsrtp  276
DSSP  ..eellLLHHHHHHHHHH.HHHHhhhhllleEEEEEEEEEeeeeehhhhhhhhhhlllll


DSSP  .....................hhhhlhhhhhhhhhlllll
Query .....................eddldenellmkisnaaga  139
ident                                         
Sbjct rpaptlqlnpdkhdifdfdmkdikllnydpypaikapvav  316
DSSP  lllleeeellllllhhhllhhheeeellllllllllllll